| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754557
Identifier: 170754557
GI number: 170754557
Start: 3596561
End: 3596947
Strand: Reverse
Name: 170754557
Synonym: CLD_1205
Alternate gene names: NA
Gene position: 3596947-3596561 (Counterclockwise)
Preceding gene: 170757100
Following gene: 170755380
Centisome position: 90.87
GC content: 24.81
Gene sequence:
>387_bases ATGTTCTTCTTTGGTATATTCGGTATAAATACAAAACAAGAAGAAGTGGAGGATTTTGAAAATTTGGTTTGCAAAAAATG TGGTATTTTAAGTAGATACACCGTTATAAAAACCTATAATGTTTTTCATTTTTTCTTTATACCACTTATTAAGTGGGGAG AAAAGTATTATTTAAAATCTAGATGTTGTAATACTATATATGCCATATCAAAGGAAAATTTAGATAGAGTTAGAGAGGAT AGAACTCTTAATAATATTGATTTAGAGGAAATATATAGTGAAAATTCAAGTGCTAATAATAGTAAAATAATTTGTAATAG TTGTGGAAAAGAAATAGATAGTTCTTTTAAATATTGCCCACATTGTGGAAAAAGAATATATTTTTAA
Upstream 100 bases:
>100_bases ATACCAATGATGATTGGAATGATTTTTGGCAACACTAGAATTCAGTTAAAGTTATATTATTTAAAACTAATAAAATAACT AGTTTGAGAGGGGAAGATTT
Downstream 100 bases:
>100_bases TAAAAATGTATTGCAATAATATAAAAACTATAGTATAATAGTTTTTGTCTTAGGGGTATAGCTCAATTGGTAGAGTAGCG GTCTCCAAAACCGTTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFFFGIFGINTKQEEVEDFENLVCKKCGILSRYTVIKTYNVFHFFFIPLIKWGEKYYLKSRCCNTIYAISKENLDRVRED RTLNNIDLEEIYSENSSANNSKIICNSCGKEIDSSFKYCPHCGKRIYF
Sequences:
>Translated_128_residues MFFFGIFGINTKQEEVEDFENLVCKKCGILSRYTVIKTYNVFHFFFIPLIKWGEKYYLKSRCCNTIYAISKENLDRVRED RTLNNIDLEEIYSENSSANNSKIICNSCGKEIDSSFKYCPHCGKRIYF >Mature_128_residues MFFFGIFGINTKQEEVEDFENLVCKKCGILSRYTVIKTYNVFHFFFIPLIKWGEKYYLKSRCCNTIYAISKENLDRVRED RTLNNIDLEEIYSENSSANNSKIICNSCGKEIDSSFKYCPHCGKRIYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15140; Mature: 15140
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFFGIFGINTKQEEVEDFENLVCKKCGILSRYTVIKTYNVFHFFFIPLIKWGEKYYLKS CEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RCCNTIYAISKENLDRVREDRTLNNIDLEEIYSENSSANNSKIICNSCGKEIDSSFKYCP HHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEHHHHCHHHHHHCCCCC HCGKRIYF CCCCCCCC >Mature Secondary Structure MFFFGIFGINTKQEEVEDFENLVCKKCGILSRYTVIKTYNVFHFFFIPLIKWGEKYYLKS CEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RCCNTIYAISKENLDRVREDRTLNNIDLEEIYSENSSANNSKIICNSCGKEIDSSFKYCP HHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEHHHHCHHHHHHCCCCC HCGKRIYF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA