| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757100
Identifier: 170757100
GI number: 170757100
Start: 3597010
End: 3597900
Strand: Reverse
Name: 170757100
Synonym: CLD_1204
Alternate gene names: NA
Gene position: 3597900-3597010 (Counterclockwise)
Preceding gene: 170756279
Following gene: 170754557
Centisome position: 90.9
GC content: 28.17
Gene sequence:
>891_bases TTGAGAAAAATATACTCCTACATAGTAAGTGTATTATTATTTGTATTGCTTATTCCTATGTGGAATGTTAAAGCAAATGA TACATATATGATTACAGAAGGGGTAGTTAAGCTTAATAAAAAAATATATATTGAGCAAGATAAAGTAGAAAATACTGATG TTATAAGTATAGGAGCAGATATATATGTAAATGGAACTGTAAATGGAGATGTAACTTCTATAGGTGGAAATGTATATATA AATGGTAAAGTTACAGGGGATGCAACAGCTATAGGTGGAAGAGTTACAAAAGGATCAAAAGGAATTGTAACAGGAACTAT AAAAGAAAAATTTAAAAAAAGCAAGATGCCTTTTATAAATAGTAATAGAAATATAAAAAGCACTAAATTTGATTATAGTA GAGTAATATCAACTATATTATTGTTTATATTGTGCATTATAGCATATAACTTGATGCCATATAACGAAATGAGAATGGCA TCTGCTATAGATAAGGAATTTGGGAAAAGTTTGATCTATGGATATGGTACTATAATATTGATTGTTATGCTGTTGATTAC TTTATTATTTAGTATAGTAGGCATTATATTGGTTCCAATAGTAGCAATAGTGTTCTTAATAACTTTTCTTATGGGATTCA CATCAATGTGTTTATATTTAGGGAAAAGATTCTTAAAATCAAAAGTGTCTCCTATGACTTCTATATTAATTGGTGTAGCT TTTTATGAAGTAATAAGAAGTGTGGTCTTTTTAGGTTTGGGTCATGCTATTATTATATTGTTTATATTTCCATTAAGTAT TGGTATACCTATAAGAAGTAAGTTCGGCAGTTTTAAAACCTGGAGAAGGATGGATACCAATGATGATTGGAATGATTTTT GGCAACACTAG
Upstream 100 bases:
>100_bases ACTACTGAAAATCTATGACAATGATATTTTATATGAGGATATGATACAGTATAACATATCACTACTAAAAAGTAATTTTA AATAAAAGGTGGTGTTTGTA
Downstream 100 bases:
>100_bases AATTCAGTTAAAGTTATATTATTTAAAACTAATAAAATAACTAGTTTGAGAGGGGAAGATTTATGTTCTTCTTTGGTATA TTCGGTATAAATACAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRKIYSYIVSVLLFVLLIPMWNVKANDTYMITEGVVKLNKKIYIEQDKVENTDVISIGADIYVNGTVNGDVTSIGGNVYI NGKVTGDATAIGGRVTKGSKGIVTGTIKEKFKKSKMPFINSNRNIKSTKFDYSRVISTILLFILCIIAYNLMPYNEMRMA SAIDKEFGKSLIYGYGTIILIVMLLITLLFSIVGIILVPIVAIVFLITFLMGFTSMCLYLGKRFLKSKVSPMTSILIGVA FYEVIRSVVFLGLGHAIIILFIFPLSIGIPIRSKFGSFKTWRRMDTNDDWNDFWQH
Sequences:
>Translated_296_residues MRKIYSYIVSVLLFVLLIPMWNVKANDTYMITEGVVKLNKKIYIEQDKVENTDVISIGADIYVNGTVNGDVTSIGGNVYI NGKVTGDATAIGGRVTKGSKGIVTGTIKEKFKKSKMPFINSNRNIKSTKFDYSRVISTILLFILCIIAYNLMPYNEMRMA SAIDKEFGKSLIYGYGTIILIVMLLITLLFSIVGIILVPIVAIVFLITFLMGFTSMCLYLGKRFLKSKVSPMTSILIGVA FYEVIRSVVFLGLGHAIIILFIFPLSIGIPIRSKFGSFKTWRRMDTNDDWNDFWQH >Mature_296_residues MRKIYSYIVSVLLFVLLIPMWNVKANDTYMITEGVVKLNKKIYIEQDKVENTDVISIGADIYVNGTVNGDVTSIGGNVYI NGKVTGDATAIGGRVTKGSKGIVTGTIKEKFKKSKMPFINSNRNIKSTKFDYSRVISTILLFILCIIAYNLMPYNEMRMA SAIDKEFGKSLIYGYGTIILIVMLLITLLFSIVGIILVPIVAIVFLITFLMGFTSMCLYLGKRFLKSKVSPMTSILIGVA FYEVIRSVVFLGLGHAIIILFIFPLSIGIPIRSKFGSFKTWRRMDTNDDWNDFWQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33246; Mature: 33246
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIYSYIVSVLLFVLLIPMWNVKANDTYMITEGVVKLNKKIYIEQDKVENTDVISIGAD CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCEEEEECCCCCCCCEEEECCE IYVNGTVNGDVTSIGGNVYINGKVTGDATAIGGRVTKGSKGIVTGTIKEKFKKSKMPFIN EEEECCCCCCEEEECCEEEEEEEECCCCCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCC SNRNIKSTKFDYSRVISTILLFILCIIAYNLMPYNEMRMASAIDKEFGKSLIYGYGTIIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVMLLITLLFSIVGIILVPIVAIVFLITFLMGFTSMCLYLGKRFLKSKVSPMTSILIGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYEVIRSVVFLGLGHAIIILFIFPLSIGIPIRSKFGSFKTWRRMDTNDDWNDFWQH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCHHHHCCC >Mature Secondary Structure MRKIYSYIVSVLLFVLLIPMWNVKANDTYMITEGVVKLNKKIYIEQDKVENTDVISIGAD CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCEEEEECCCCCCCCEEEECCE IYVNGTVNGDVTSIGGNVYINGKVTGDATAIGGRVTKGSKGIVTGTIKEKFKKSKMPFIN EEEECCCCCCEEEECCEEEEEEEECCCCCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCC SNRNIKSTKFDYSRVISTILLFILCIIAYNLMPYNEMRMASAIDKEFGKSLIYGYGTIIL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVMLLITLLFSIVGIILVPIVAIVFLITFLMGFTSMCLYLGKRFLKSKVSPMTSILIGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYEVIRSVVFLGLGHAIIILFIFPLSIGIPIRSKFGSFKTWRRMDTNDDWNDFWQH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA