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The map label for this gene is yvdD [H]

Identifier: 170754390

GI number: 170754390

Start: 973952

End: 974530

Strand: Reverse

Name: yvdD [H]

Synonym: CLD_3706

Alternate gene names: 170754390

Gene position: 974530-973952 (Counterclockwise)

Preceding gene: 170756178

Following gene: 170757261

Centisome position: 24.62

GC content: 32.3

Gene sequence:

>579_bases
ATGAAAAGAATATGTGTTTATTCTGGCTCTAATCTAGGTTTACGCTCTGAATATAAAGAAAGTGCTAAACTACTAGGTAA
AATATTAGCTGAAAACAAAATTGAATTAGTATATGGTGGTTCAAGAATAGGTCTTATGGGTGAGATATCAAATGAAGTTT
TAAGAAATAACGGAAAAGTTATTGGGGTTATGCCTAAAGGGCTCTTCTCAGGTGAAATGGTTCATGAAAATTTGACTAAA
CTTATTGAAGTTGAAAACATGCATGAAAGGAAACAAACTATGGCTGAGCTTTCTGATGGATTTATAGCACTTCCTGGTGG
GCTTGGTACTTTTGAAGAACTGTTTGAAGTACTTAGTTGGGCTCAGCTTGGTATTCATAAAAAGCCTATTGGCATATTAA
ATATATCAAACTTCTTTGACCCTCTTTTACATATGATCAAAAACACTTGTACTGAAGGTTTCATGAATGAATCAAATATT
AAGCTTATTTCAGTTTCAGACAATCCTTCAAAATTAATCAAACAAATGAAAAACTATGTGCCACCTTTAATGGGAAATAA
ATGGCGTGAATTAGTATAA

Upstream 100 bases:

>100_bases
TATTTTCTTAGTCTTAGGCGTTTATATTATTCAAACTCATTAATTAGAAATTTATATTTAAATCTTAATCAATAAAACAT
CATTATAGGAGGTAATTTTT

Downstream 100 bases:

>100_bases
AAATATCTTCATTTTCTACCAAAGGTAATTATAAGAAAAATGTAGACAGTTGACTACTATATGTATCACACTTTATTTTA
TTATTTGCTGTAAAAGTTGT

Product: decarboxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGLMGEISNEVLRNNGKVIGVMPKGLFSGEMVHENLTK
LIEVENMHERKQTMAELSDGFIALPGGLGTFEELFEVLSWAQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNI
KLISVSDNPSKLIKQMKNYVPPLMGNKWRELV

Sequences:

>Translated_192_residues
MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGLMGEISNEVLRNNGKVIGVMPKGLFSGEMVHENLTK
LIEVENMHERKQTMAELSDGFIALPGGLGTFEELFEVLSWAQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNI
KLISVSDNPSKLIKQMKNYVPPLMGNKWRELV
>Mature_192_residues
MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGLMGEISNEVLRNNGKVIGVMPKGLFSGEMVHENLTK
LIEVENMHERKQTMAELSDGFIALPGGLGTFEELFEVLSWAQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNI
KLISVSDNPSKLIKQMKNYVPPLMGNKWRELV

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=38.1642512077295, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21483; Mature: 21483

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGLMGEISNEVLRNNGKV
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHCCCCE
IGVMPKGLFSGEMVHENLTKLIEVENMHERKQTMAELSDGFIALPGGLGTFEELFEVLSW
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
AQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNIKLISVSDNPSKLIKQMKNYV
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCC
PPLMGNKWRELV
CCCCCCHHHHCC
>Mature Secondary Structure
MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGLMGEISNEVLRNNGKV
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHCCCCE
IGVMPKGLFSGEMVHENLTKLIEVENMHERKQTMAELSDGFIALPGGLGTFEELFEVLSW
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
AQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNIKLISVSDNPSKLIKQMKNYV
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCC
PPLMGNKWRELV
CCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]