| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756178
Identifier: 170756178
GI number: 170756178
Start: 974588
End: 975043
Strand: Reverse
Name: 170756178
Synonym: CLD_3705
Alternate gene names: NA
Gene position: 975043-974588 (Counterclockwise)
Preceding gene: 170755360
Following gene: 170754390
Centisome position: 24.63
GC content: 32.24
Gene sequence:
>456_bases GTGATATTTATTTATTACTTACTATCATTAATATCTGGATTTGCCTTAACCTTACAGGTTGGTATAAATGGGGTACTTCG TTCTAAAATAGGAAGTCCTATTCTTTCATCTCTTATTAGCTTCGGTGTAGGAACTTTAGGTCTTGCATTAGTATTCTTCT TTACTGTATCAAATGGTTCTAGTCCATTGCCAACTGCTACTCATATCAAAAATACAAGTTGGTGGATGTTTCTAGGGGGA TTATTGGGAGCATTTTATATATTTACAACTATATTTGCATCTCCTAAGATTGGATTTGCAAATATGTTTAGTCTTGTAGT ATGCGGTCAAATACTCCTTGCTGTTCTATTTGACCATTTTGGATTATTAGGCAACCAAATTCATTTATTAACTCCACTAA GAACACTAGGAATTATTTTCTTAGTCTTAGGCGTTTATATTATTCAAACTCATTAA
Upstream 100 bases:
>100_bases ATACCTCCTATACTAGATATTAATTTTACTTATATCGGTATATTAATTATAATTGCTTTATAAAAGTTATTCAACAATTA AAAGCATTGGAGGTTATAGT
Downstream 100 bases:
>100_bases TTAGAAATTTATATTTAAATCTTAATCAATAAAACATCATTATAGGAGGTAATTTTTATGAAAAGAATATGTGTTTATTC TGGCTCTAATCTAGGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGTLGLALVFFFTVSNGSSPLPTATHIKNTSWWMFLGG LLGAFYIFTTIFASPKIGFANMFSLVVCGQILLAVLFDHFGLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH
Sequences:
>Translated_151_residues MIFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGTLGLALVFFFTVSNGSSPLPTATHIKNTSWWMFLGG LLGAFYIFTTIFASPKIGFANMFSLVVCGQILLAVLFDHFGLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH >Mature_151_residues MIFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGTLGLALVFFFTVSNGSSPLPTATHIKNTSWWMFLGG LLGAFYIFTTIFASPKIGFANMFSLVVCGQILLAVLFDHFGLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16359; Mature: 16359
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGTLGLALVFFFTVSNGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCC SPLPTATHIKNTSWWMFLGGLLGAFYIFTTIFASPKIGFANMFSLVVCGQILLAVLFDHF CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGTLGLALVFFFTVSNGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCC SPLPTATHIKNTSWWMFLGGLLGAFYIFTTIFASPKIGFANMFSLVVCGQILLAVLFDHF CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA