Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
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Accession | NC_010506 |
Length | 5,935,403 |
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Identifier: 170726989
GI number:
Start: 3238529
End: 3240577
Strand: Direct
Name: Not Available
Synonym: Swoo_2643
Alternate gene names: NA
Gene position: NA
Preceding gene: 170726988
Following gene: 170726990
Centisome position: NA
GC content: NA
Gene sequence:
>2049_bases ATGATCCAATCCACACAGCCCATTAAAGATCTGCTTAAAGTCTGGGAAGTTGAGCGTTTAATCACGCCACTAGACAGACA CTTTGCACTGGAGCTCGCACTCGTTCACCAACAACAGCTTACCGCTCTAGATAAGTCGCATAGCAGTGATAACTCATGCA CACAAAGCTTGTACAAAGAGGACTCCTACAGCGAACTCTTTTTACTGACCTGCGCCCTGCTCAGCAAACAACTATCACAA CAACACACCTGTTTGCCCATCAAACAGATAGTGCTAGATAACCCTATGGTGGAGCAAGTCTCTAACTGTCAGATCACCTG TAGCCATGATGAGTTAACCTCGCTTTTAGCGCAGTTTGCTTGTATCGGCTTGGTCAGCCCAGAGTCACAGGTAGAACAAG TCGCGGCGGCTGCAACCCCGATAGTATTAGATTGCGGCGATCTCTACCTGCAACGCTATTATCAATTTGAGACCCAAGTC AGCGACACGCTCATTCAACTATCAAAAGAGCCAGGCTCTCAAGTTTCACCAGCCACAAAAGCAAGCTTAGACATCCTCTT TCCTGCACCTGATGATGTCACTGTATTTGACTGGCAAAAAATCGCTACCGCCACGGCATTTAGCAAAAAGCTGGCAGTTA TCACCGGCGGCCCTGGAACAGGTAAAACCACAACCGTCACTAAACTGCTATTTTTGCTAACCCAAGAATCGCCAATGACC ATTAGACTGGTCGCGCCAACAGGTAAAGCAGCCGCAAGGTTAAGTGAATCTATTAAGGCGTCCAAGCAGCGCTTGAAGCT GGAGCTGGCTCCCTACGCACACCAGATTAATCTCGATAGCTTAACTCGAGTCCCCGAAGAGGCCTCTACCCTACACAGAT TGTTAGGGGTTATCCCCAATTCACACAAATTTCGCCACCATAAGGACAACCCGCTCAGGCTAGATCTGCTGGTTGTCGAT GAGGCCTCTATGGTCGATCTGCCCATGATGCATAAGGTGTTATCGGCACTGCCAAGCCACGCCAGACTGATACTGCTTGG CGATCAAGACCAGCTTGCATCGGTCGAGGCTGGCGCCGTACTTGCTGATATCTGTGCGGGCTTAAAAGCCCGAAGTGATG CACAAAGCAAGTGGCAGATGCGCTATTCAGCAGGTTATGCACAAACACTGTCAACATTGACCAGCTTTGATCTCAGCCTC TTTACCAGTGAATCACCAAAAATTGGTGATAGTCTCTGCATGTTGATGCACAGCCACAGATTTAAAGGCGATGCAGGCAT TGGCCAACTGGCCGCTGCGGTCAATAACTCCGATAAAGCAGGTATCATGCAGGTTTGGCAGAGGGGTTATGAGGAGCTAC TCTGGATTGAGCATCAAAAGACACAGTCAGGCAACACAGGTTTAGATCAACTGCTCTCCCTCGCCGTGTCTCATTACAAA CGCTACCTTGAACTGGCCAAAGATAATACTGCCACAGCCACCGATATCATCGACTCCTATAACGAGTTTCGCATTTTATG CGCCATGCGCGCTGGTGAATATGGCGTCGATGGCATCAACTTAAGTGTCACTAATGCACTAAAACAGGCAAAACTCATCA CCACTGATGTCGAGTTTTACCAAGGCCGCCCAGTAATAATCCAAAGTAACGACTATAACTTAGGCCTGTTTAATGGTGAT ATTGGCTTGATACTACTAGATAATGAAAAGTCTGCGCAGAACGGATCGGTACCAAGGCTGATGGCCCACTTTATCCAAGC AGATGGTAGCATCTTAAAAGTCCTCCCAGCCCGTCTACCCAGCCACGATACCTGTTTTGCCATGACAGTACACAAGAGCC AAGGTAGTGAATTTGCCAACGTAGGCTTAGTCCTGCCATTGTGGCCCAGCCTTGCTCAAAAGCAGCTGTTAACCAAAGAA CTCGTATACACAGCCATCACCCGAGCCAAGCAACACTTCACATGCCTAGGCTCACAAACCGTCTTCGAGCACGCCAGTCT GCAAGCCACACAGCGCTCATCAGGACTTGCTAGGCGTTTGTGGCTATAG
Upstream 100 bases:
>100_bases TCGATATAGATCTAAATGAGCCTAAGGAGCAGATCATAGCAACAGCTCAATCAACCCAGACAGCACAGCCTTCACAGACA GATCAGATGGAGCTTAAGCT
Downstream 100 bases:
>100_bases AGATAGGGTATTAAGCAGATGACATCAAAAATGAATAGCAAGCCAAAGCTCTATTACATCTACGATCCTATGTGCAGCTG GTGTTGGGGCTATGCTCCAA
Product: exodeoxyribonuclease V subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>682_residues MIQSTQPIKDLLKVWEVERLITPLDRHFALELALVHQQQLTALDKSHSSDNSCTQSLYKEDSYSELFLLTCALLSKQLSQ QHTCLPIKQIVLDNPMVEQVSNCQITCSHDELTSLLAQFACIGLVSPESQVEQVAAAATPIVLDCGDLYLQRYYQFETQV SDTLIQLSKEPGSQVSPATKASLDILFPAPDDVTVFDWQKIATATAFSKKLAVITGGPGTGKTTTVTKLLFLLTQESPMT IRLVAPTGKAAARLSESIKASKQRLKLELAPYAHQINLDSLTRVPEEASTLHRLLGVIPNSHKFRHHKDNPLRLDLLVVD EASMVDLPMMHKVLSALPSHARLILLGDQDQLASVEAGAVLADICAGLKARSDAQSKWQMRYSAGYAQTLSTLTSFDLSL FTSESPKIGDSLCMLMHSHRFKGDAGIGQLAAAVNNSDKAGIMQVWQRGYEELLWIEHQKTQSGNTGLDQLLSLAVSHYK RYLELAKDNTATATDIIDSYNEFRILCAMRAGEYGVDGINLSVTNALKQAKLITTDVEFYQGRPVIIQSNDYNLGLFNGD IGLILLDNEKSAQNGSVPRLMAHFIQADGSILKVLPARLPSHDTCFAMTVHKSQGSEFANVGLVLPLWPSLAQKQLLTKE LVYTAITRAKQHFTCLGSQTVFEHASLQATQRSSGLARRLWL
Sequences:
NA
Specific function: NA
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA