Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
---|---|
Accession | NC_010506 |
Length | 5,935,403 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 170726988
GI number:
Start: 3234843
End: 3238532
Strand: Direct
Name: Not Available
Synonym: Swoo_2642
Alternate gene names: NA
Gene position: NA
Preceding gene: 170726987
Following gene: 170726989
Centisome position: NA
GC content: NA
Gene sequence:
>3690_bases ATGACGAGTAATAATACAGTGAATCAGACAGGCTCTGTCCCGTTAAACACCCTCACCTTGCCCTTTGGTGGCAGTCGTTT GATTGAGGCCAGTGCTGGTACAGGCAAAACCTTCACCATCGCAGGGCTTTATGTGCGCCTTTTGCTCGGTCACGAGATCC CAACGCCACTGACCTGCGAGCAGATATTAGTGGTCACTTTTACCAATGCGGCAACGGGCGAGCTTAGGGATCGTATTCGC CGCAAGATACAGCTGGCCTACCGCTGCTTTATCGGTTTAGATACCGGTGATGAGTTGATTGAGTCTCTCTATCGACTCAC TCCTGAATCTGAGCGCCCACTGGCACTAAAGCGACTCGACTTGGCGCTTAAATCTTTAGATGAAGCCTCTATCTTTACCA TTCACGGTTTCTGTCAGCGGATCTTGGCCGACATGGCTTTTGAGTCCTCCCTGCTGTTTGAGTCAGAATTTACCTTAGAT GACAGCGAGTTTTTGCACCATGCGGTGCGTGATTTCTGGCGTGAGCAGTGCTATCCGCTGCCTATCTATCTTGCTGAGAT CATACAGAAGAAATTTAGCGACCCTGACGCCCTATCTAAGCAGCTCAGGCCGCTACTTGGCGCGAGTCAGGCCACAGCCC AGCCGACACCTCAGCCCTTTGAGAAACTGCAGCAGACCTTAACTCAAAGCTTAAGTCGTCTGAAACTTATCTGGCCACGT GAGCGTGAAAATATCGAAGCTTTACTCCATGCACTCCCATTAAATGGTGTTCGATTTGGTAAGAAGCCCGATGGTTACCC TAAACTTGCCGTTATGCTCGATGCCATGGACAACTGGTGCAAGTTCAGTGACAGTCTGCCACCTATGAAGGTGATGGAGT CTCTGTCACTGAGTGAGCTTAAGCTCAATAAGGGTGGTGAAATACCAACACCTGAGCAAGCCCCTGTGCTGGATCATATC GAGCGTTTATGCTCGCTTATTAACGACTTTATCCCAAGTTTTCTCTATTGTGCCAGAGAGGGGATCTCACGCCGATTTAT CCAACAAAAATCTGAGCGTAACCTGTTAACCCCAGATGATCTACTGACTACCTTAGAGCAAGCACTGCGCCCCAATGAGC ACGGCGAGTCCACCTTGGCTAACACAGCTCAATTGGCCGCAACCATTGCCAAACGTTTTCCAGTGGCACTGATTGATGAG TTTCAAGATACCGATCCACTGCAATTCGCAATCTTTAGCCGCATCTACCAGATGCAAGCTAACATTCCAGCAAAGGCAGG TGCAGGTAACTTAAGCCTGTTGATGATTGGCGATCCGAAACAGGCTATCTATGCTTTTAGGGGCGCGGATATTCACACTT ATATTCAGGCCAGAACACAAACTCAAGATCACTATAATCTCGATACCAACTATCGCTCTAGCCGCAATATGATTGTGGGT GTTAACGCCCTGTTTGAGAATCGAGACGATCCCTTTATCAGCCAAGCGATCCCGTTTGAGCCTGTGCACCCCTCACCTTT TGCCGATAAAAAGGTGTTTATCGAAAGTGGAGGCGATGATTCAGCGCTCAAAATTAAACTGCTTAGTGAAGATCCTGAAA AGGGGTTGAATAAAACCACCGCCAGAAAACGCTTAGCGGAAGATGCCGCCGCTGAGATCTGCAGGCTGCTCACACAATCA CAAGCTGGCGAATGCAGCATTAGCGGTCAACCACTAAAAGCCAAAGATATTGCCGTACTGGTGCGTGACAGAAATGAAGC AGCTGTGATTAAGCAGTCTTTGTCAGACAGGCAGATTGGCGCCGTATTTTTAAGTCGTGACAGCGTATTTAACACCTTAG AAGCCCGCGAAATGGCCTTGGTGCTTCACGCCCTTGCGACGCCAAAAGATGAGCGAGCACTGAGATCGGCTTTAGCCACT TCACTGCTTGGCTTTGATGCGCTATCGATCCACAGTTTTAACCAAGATGAGATGGTCAGACAGACCCTGCTTGAACAGTT TGATGAGCTACATAAGAACTGGTTAAGGCGTGGAGTCATGCCAGCACTGCTGAATCTGGCTAACGAAACTAAACTGATTG AGCGCCTACTTCAAGATGAAGATGGCGAACGACGGTTAACAGATTTCAGGCACTTGGCCGAGTTATTGCAACAAAAAGCC ACAGAGCTTGATGGTATTAGCGCGCTGGTGAACTGGTATGAGCAAGCGCTCATCGAAAATAATGCCAATGAAGAAGCACA ACTAAGACTCGAAAGTGAGCAGAACCTAGTTCAAATCGTCACCATACATAAGAGTAAGGGACTCGAGTATCCGGTCTGTT TTATCCCCTTTGTTAGCTTAGCCAGAGACAACCGTCGCAAGCCTGCGCCAATGCTTTACCATGAAAATAACAAGTTAGTG TGGGATATCGCGCAAAGTGATGAGGGCTGGGAGCGGCATAAACGTGAAAACTTAGCCGAAGATCTGCGCCTACTCTATGT CGCCATGACCCGACCTGTGTATCAATGTTATCTCTATGTGGCTAACCACAGTCGCTTTACCAAAAAAGCGGGGATCACCA GCCAGCTCCATGAAACTGGTATTGGTTACCTACTGGGCATTGAAGATAAAGCCTGCGAGTTTTCGCGTATTCAATCTCAG GCGCAAAAGCTGATGGAGCAAGCCATTAGCGTCATACAGATGGGCGATGACGCCTCAACTCAACCTCTGGATAATATTTC AGATATTGAGCTCAAATTAGCCCCTAAAGAGCTCAAACGAAAGCTATACACACCTTGGCGTGTGGGCAGTTACTCTGGGC TGGTGAAAGATCTGCCCCATGAACATATTGCCCCTGGCGCCGATGATGAAGCTTTTCCAGAGCTTGAAATCATTCAAGAT GAGGTCGACCCAACTCCCTCTAGATTCACGTTTGAACGTGGCGCCAATGCTGGTAGCTTTATGCACTTAGTACTGGAATT GATTGATTTTCCCCAAGCTGAAACTGAATTGCCCATTCACCTGCCGATCGCCATGGAAAAGTATGGCATAGATGAGAGCT GGTATGAGGTACTAAACATTTGGTATCGAGATCTTCTAGCATCGCCATTGGTTGCAGATGGCTCGCTAAAACTGGCTCAA TTAGCTCACGCGCAAAAGTTGGTGGAGATGGAGTTTTACCTGCCAATTAATCAACTGATCGCAGTTAAGCTTAATACTTT ACTCGAAACCCATGGTTACAGCGCAGGTTTGAACTTTGAATCCCTAAAGGGGATGCTCAAAGGTTTTATCGATCTCACTT TCGAGCACCAAGGTCAGTTCTACATTGCCGATTACAAATCTAACCATTTGGGTGATGATGTTAGCCATTATGGCTTTGAT GCCATGAAAGGGGCTATCCGTAGCCATAGATACGATCTGCAGTACATCATCTATACCTTAGCGCTGCATCGGTATCTGCG ATTGAGAATGCCAAATTATAATTACGATCAACATATCGGCGGCAGTTTTTACCTTTTCCTGCGGGGTATGTCTACCGCAG CACCACTATCAGGTGTTTTCTATGACAAACCGCCTAGAGCACTTATCGAATCCCTCGATACACTGTTCGATATAGATCTA AATGAGCCTAAGGAGCAGATCATAGCAACAGCTCAATCAACCCAGACAGCACAGCCTTCACAGACAGATCAGATGGAGCT TAAGCTATGA
Upstream 100 bases:
>100_bases TTGGACTCACTGCCATGACGCTCCTCTCTCCCATGCTCAGCCTTTATCACAAAGACAGGCTGAGTGAACTCACTGCTTTT GTCGAAGGGGGAGCACAGTA
Downstream 100 bases:
>100_bases TCCAATCCACACAGCCCATTAAAGATCTGCTTAAAGTCTGGGAAGTTGAGCGTTTAATCACGCCACTAGACAGACACTTT GCACTGGAGCTCGCACTCGT
Product: exodeoxyribonuclease V subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1229_residues MTSNNTVNQTGSVPLNTLTLPFGGSRLIEASAGTGKTFTIAGLYVRLLLGHEIPTPLTCEQILVVTFTNAATGELRDRIR RKIQLAYRCFIGLDTGDELIESLYRLTPESERPLALKRLDLALKSLDEASIFTIHGFCQRILADMAFESSLLFESEFTLD DSEFLHHAVRDFWREQCYPLPIYLAEIIQKKFSDPDALSKQLRPLLGASQATAQPTPQPFEKLQQTLTQSLSRLKLIWPR ERENIEALLHALPLNGVRFGKKPDGYPKLAVMLDAMDNWCKFSDSLPPMKVMESLSLSELKLNKGGEIPTPEQAPVLDHI ERLCSLINDFIPSFLYCAREGISRRFIQQKSERNLLTPDDLLTTLEQALRPNEHGESTLANTAQLAATIAKRFPVALIDE FQDTDPLQFAIFSRIYQMQANIPAKAGAGNLSLLMIGDPKQAIYAFRGADIHTYIQARTQTQDHYNLDTNYRSSRNMIVG VNALFENRDDPFISQAIPFEPVHPSPFADKKVFIESGGDDSALKIKLLSEDPEKGLNKTTARKRLAEDAAAEICRLLTQS QAGECSISGQPLKAKDIAVLVRDRNEAAVIKQSLSDRQIGAVFLSRDSVFNTLEAREMALVLHALATPKDERALRSALAT SLLGFDALSIHSFNQDEMVRQTLLEQFDELHKNWLRRGVMPALLNLANETKLIERLLQDEDGERRLTDFRHLAELLQQKA TELDGISALVNWYEQALIENNANEEAQLRLESEQNLVQIVTIHKSKGLEYPVCFIPFVSLARDNRRKPAPMLYHENNKLV WDIAQSDEGWERHKRENLAEDLRLLYVAMTRPVYQCYLYVANHSRFTKKAGITSQLHETGIGYLLGIEDKACEFSRIQSQ AQKLMEQAISVIQMGDDASTQPLDNISDIELKLAPKELKRKLYTPWRVGSYSGLVKDLPHEHIAPGADDEAFPELEIIQD EVDPTPSRFTFERGANAGSFMHLVLELIDFPQAETELPIHLPIAMEKYGIDESWYEVLNIWYRDLLASPLVADGSLKLAQ LAHAQKLVEMEFYLPINQLIAVKLNTLLETHGYSAGLNFESLKGMLKGFIDLTFEHQGQFYIADYKSNHLGDDVSHYGFD AMKGAIRSHRYDLQYIIYTLALHRYLRLRMPNYNYDQHIGGSFYLFLRGMSTAAPLSGVFYDKPPRALIESLDTLFDIDL NEPKEQIIATAQSTQTAQPSQTDQMELKL
Sequences:
NA
Specific function: NA
COG id: COG1074
COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA