Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170726988

GI number:

Start: 3234843

End: 3238532

Strand: Direct

Name: Not Available

Synonym: Swoo_2642

Alternate gene names: NA

Gene position: NA

Preceding gene: 170726987

Following gene: 170726989

Centisome position: NA

GC content: NA

Gene sequence:

>3690_bases
ATGACGAGTAATAATACAGTGAATCAGACAGGCTCTGTCCCGTTAAACACCCTCACCTTGCCCTTTGGTGGCAGTCGTTT
GATTGAGGCCAGTGCTGGTACAGGCAAAACCTTCACCATCGCAGGGCTTTATGTGCGCCTTTTGCTCGGTCACGAGATCC
CAACGCCACTGACCTGCGAGCAGATATTAGTGGTCACTTTTACCAATGCGGCAACGGGCGAGCTTAGGGATCGTATTCGC
CGCAAGATACAGCTGGCCTACCGCTGCTTTATCGGTTTAGATACCGGTGATGAGTTGATTGAGTCTCTCTATCGACTCAC
TCCTGAATCTGAGCGCCCACTGGCACTAAAGCGACTCGACTTGGCGCTTAAATCTTTAGATGAAGCCTCTATCTTTACCA
TTCACGGTTTCTGTCAGCGGATCTTGGCCGACATGGCTTTTGAGTCCTCCCTGCTGTTTGAGTCAGAATTTACCTTAGAT
GACAGCGAGTTTTTGCACCATGCGGTGCGTGATTTCTGGCGTGAGCAGTGCTATCCGCTGCCTATCTATCTTGCTGAGAT
CATACAGAAGAAATTTAGCGACCCTGACGCCCTATCTAAGCAGCTCAGGCCGCTACTTGGCGCGAGTCAGGCCACAGCCC
AGCCGACACCTCAGCCCTTTGAGAAACTGCAGCAGACCTTAACTCAAAGCTTAAGTCGTCTGAAACTTATCTGGCCACGT
GAGCGTGAAAATATCGAAGCTTTACTCCATGCACTCCCATTAAATGGTGTTCGATTTGGTAAGAAGCCCGATGGTTACCC
TAAACTTGCCGTTATGCTCGATGCCATGGACAACTGGTGCAAGTTCAGTGACAGTCTGCCACCTATGAAGGTGATGGAGT
CTCTGTCACTGAGTGAGCTTAAGCTCAATAAGGGTGGTGAAATACCAACACCTGAGCAAGCCCCTGTGCTGGATCATATC
GAGCGTTTATGCTCGCTTATTAACGACTTTATCCCAAGTTTTCTCTATTGTGCCAGAGAGGGGATCTCACGCCGATTTAT
CCAACAAAAATCTGAGCGTAACCTGTTAACCCCAGATGATCTACTGACTACCTTAGAGCAAGCACTGCGCCCCAATGAGC
ACGGCGAGTCCACCTTGGCTAACACAGCTCAATTGGCCGCAACCATTGCCAAACGTTTTCCAGTGGCACTGATTGATGAG
TTTCAAGATACCGATCCACTGCAATTCGCAATCTTTAGCCGCATCTACCAGATGCAAGCTAACATTCCAGCAAAGGCAGG
TGCAGGTAACTTAAGCCTGTTGATGATTGGCGATCCGAAACAGGCTATCTATGCTTTTAGGGGCGCGGATATTCACACTT
ATATTCAGGCCAGAACACAAACTCAAGATCACTATAATCTCGATACCAACTATCGCTCTAGCCGCAATATGATTGTGGGT
GTTAACGCCCTGTTTGAGAATCGAGACGATCCCTTTATCAGCCAAGCGATCCCGTTTGAGCCTGTGCACCCCTCACCTTT
TGCCGATAAAAAGGTGTTTATCGAAAGTGGAGGCGATGATTCAGCGCTCAAAATTAAACTGCTTAGTGAAGATCCTGAAA
AGGGGTTGAATAAAACCACCGCCAGAAAACGCTTAGCGGAAGATGCCGCCGCTGAGATCTGCAGGCTGCTCACACAATCA
CAAGCTGGCGAATGCAGCATTAGCGGTCAACCACTAAAAGCCAAAGATATTGCCGTACTGGTGCGTGACAGAAATGAAGC
AGCTGTGATTAAGCAGTCTTTGTCAGACAGGCAGATTGGCGCCGTATTTTTAAGTCGTGACAGCGTATTTAACACCTTAG
AAGCCCGCGAAATGGCCTTGGTGCTTCACGCCCTTGCGACGCCAAAAGATGAGCGAGCACTGAGATCGGCTTTAGCCACT
TCACTGCTTGGCTTTGATGCGCTATCGATCCACAGTTTTAACCAAGATGAGATGGTCAGACAGACCCTGCTTGAACAGTT
TGATGAGCTACATAAGAACTGGTTAAGGCGTGGAGTCATGCCAGCACTGCTGAATCTGGCTAACGAAACTAAACTGATTG
AGCGCCTACTTCAAGATGAAGATGGCGAACGACGGTTAACAGATTTCAGGCACTTGGCCGAGTTATTGCAACAAAAAGCC
ACAGAGCTTGATGGTATTAGCGCGCTGGTGAACTGGTATGAGCAAGCGCTCATCGAAAATAATGCCAATGAAGAAGCACA
ACTAAGACTCGAAAGTGAGCAGAACCTAGTTCAAATCGTCACCATACATAAGAGTAAGGGACTCGAGTATCCGGTCTGTT
TTATCCCCTTTGTTAGCTTAGCCAGAGACAACCGTCGCAAGCCTGCGCCAATGCTTTACCATGAAAATAACAAGTTAGTG
TGGGATATCGCGCAAAGTGATGAGGGCTGGGAGCGGCATAAACGTGAAAACTTAGCCGAAGATCTGCGCCTACTCTATGT
CGCCATGACCCGACCTGTGTATCAATGTTATCTCTATGTGGCTAACCACAGTCGCTTTACCAAAAAAGCGGGGATCACCA
GCCAGCTCCATGAAACTGGTATTGGTTACCTACTGGGCATTGAAGATAAAGCCTGCGAGTTTTCGCGTATTCAATCTCAG
GCGCAAAAGCTGATGGAGCAAGCCATTAGCGTCATACAGATGGGCGATGACGCCTCAACTCAACCTCTGGATAATATTTC
AGATATTGAGCTCAAATTAGCCCCTAAAGAGCTCAAACGAAAGCTATACACACCTTGGCGTGTGGGCAGTTACTCTGGGC
TGGTGAAAGATCTGCCCCATGAACATATTGCCCCTGGCGCCGATGATGAAGCTTTTCCAGAGCTTGAAATCATTCAAGAT
GAGGTCGACCCAACTCCCTCTAGATTCACGTTTGAACGTGGCGCCAATGCTGGTAGCTTTATGCACTTAGTACTGGAATT
GATTGATTTTCCCCAAGCTGAAACTGAATTGCCCATTCACCTGCCGATCGCCATGGAAAAGTATGGCATAGATGAGAGCT
GGTATGAGGTACTAAACATTTGGTATCGAGATCTTCTAGCATCGCCATTGGTTGCAGATGGCTCGCTAAAACTGGCTCAA
TTAGCTCACGCGCAAAAGTTGGTGGAGATGGAGTTTTACCTGCCAATTAATCAACTGATCGCAGTTAAGCTTAATACTTT
ACTCGAAACCCATGGTTACAGCGCAGGTTTGAACTTTGAATCCCTAAAGGGGATGCTCAAAGGTTTTATCGATCTCACTT
TCGAGCACCAAGGTCAGTTCTACATTGCCGATTACAAATCTAACCATTTGGGTGATGATGTTAGCCATTATGGCTTTGAT
GCCATGAAAGGGGCTATCCGTAGCCATAGATACGATCTGCAGTACATCATCTATACCTTAGCGCTGCATCGGTATCTGCG
ATTGAGAATGCCAAATTATAATTACGATCAACATATCGGCGGCAGTTTTTACCTTTTCCTGCGGGGTATGTCTACCGCAG
CACCACTATCAGGTGTTTTCTATGACAAACCGCCTAGAGCACTTATCGAATCCCTCGATACACTGTTCGATATAGATCTA
AATGAGCCTAAGGAGCAGATCATAGCAACAGCTCAATCAACCCAGACAGCACAGCCTTCACAGACAGATCAGATGGAGCT
TAAGCTATGA

Upstream 100 bases:

>100_bases
TTGGACTCACTGCCATGACGCTCCTCTCTCCCATGCTCAGCCTTTATCACAAAGACAGGCTGAGTGAACTCACTGCTTTT
GTCGAAGGGGGAGCACAGTA

Downstream 100 bases:

>100_bases
TCCAATCCACACAGCCCATTAAAGATCTGCTTAAAGTCTGGGAAGTTGAGCGTTTAATCACGCCACTAGACAGACACTTT
GCACTGGAGCTCGCACTCGT

Product: exodeoxyribonuclease V subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1229_residues
MTSNNTVNQTGSVPLNTLTLPFGGSRLIEASAGTGKTFTIAGLYVRLLLGHEIPTPLTCEQILVVTFTNAATGELRDRIR
RKIQLAYRCFIGLDTGDELIESLYRLTPESERPLALKRLDLALKSLDEASIFTIHGFCQRILADMAFESSLLFESEFTLD
DSEFLHHAVRDFWREQCYPLPIYLAEIIQKKFSDPDALSKQLRPLLGASQATAQPTPQPFEKLQQTLTQSLSRLKLIWPR
ERENIEALLHALPLNGVRFGKKPDGYPKLAVMLDAMDNWCKFSDSLPPMKVMESLSLSELKLNKGGEIPTPEQAPVLDHI
ERLCSLINDFIPSFLYCAREGISRRFIQQKSERNLLTPDDLLTTLEQALRPNEHGESTLANTAQLAATIAKRFPVALIDE
FQDTDPLQFAIFSRIYQMQANIPAKAGAGNLSLLMIGDPKQAIYAFRGADIHTYIQARTQTQDHYNLDTNYRSSRNMIVG
VNALFENRDDPFISQAIPFEPVHPSPFADKKVFIESGGDDSALKIKLLSEDPEKGLNKTTARKRLAEDAAAEICRLLTQS
QAGECSISGQPLKAKDIAVLVRDRNEAAVIKQSLSDRQIGAVFLSRDSVFNTLEAREMALVLHALATPKDERALRSALAT
SLLGFDALSIHSFNQDEMVRQTLLEQFDELHKNWLRRGVMPALLNLANETKLIERLLQDEDGERRLTDFRHLAELLQQKA
TELDGISALVNWYEQALIENNANEEAQLRLESEQNLVQIVTIHKSKGLEYPVCFIPFVSLARDNRRKPAPMLYHENNKLV
WDIAQSDEGWERHKRENLAEDLRLLYVAMTRPVYQCYLYVANHSRFTKKAGITSQLHETGIGYLLGIEDKACEFSRIQSQ
AQKLMEQAISVIQMGDDASTQPLDNISDIELKLAPKELKRKLYTPWRVGSYSGLVKDLPHEHIAPGADDEAFPELEIIQD
EVDPTPSRFTFERGANAGSFMHLVLELIDFPQAETELPIHLPIAMEKYGIDESWYEVLNIWYRDLLASPLVADGSLKLAQ
LAHAQKLVEMEFYLPINQLIAVKLNTLLETHGYSAGLNFESLKGMLKGFIDLTFEHQGQFYIADYKSNHLGDDVSHYGFD
AMKGAIRSHRYDLQYIIYTLALHRYLRLRMPNYNYDQHIGGSFYLFLRGMSTAAPLSGVFYDKPPRALIESLDTLFDIDL
NEPKEQIIATAQSTQTAQPSQTDQMELKL

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA