| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rsbT [H]
Identifier: 170751610
GI number: 170751610
Start: 5551139
End: 5551543
Strand: Direct
Name: rsbT [H]
Synonym: Mrad2831_5231
Alternate gene names: 170751610
Gene position: 5551139-5551543 (Clockwise)
Preceding gene: 170751609
Following gene: 170751611
Centisome position: 91.33
GC content: 67.9
Gene sequence:
>405_bases GTGACCGTCACGAAGACTGAGACCTTGCCCGTCAGATCCGGCGACGACGTCGTCCGCGTGCGGCAGCGCGTGCGTGCGCT CGCCGTGGAAATCGGCCTCGGCCTCGTCGACCAGACCAAGATCATCACCGCCGCGAGCGAGCTTGCCCGGAACACCCTCG ATTACGGTGGGGGCGGTGACGTCTTCCTGGAGATCGTCCAGGCCGGGATGCGCAAGGGCCTGCGCCTGACCTTCGAGGAC CAGGGACCGGGCATCGCCGATATTGATCAGGCGATGACCGACCACTTCACCTCGGGCGGGGGGCTCGGGCTGGGGCTCGG CGGAGCCAAGCGCCTCTCGAACGAGTTCCACATCGAGTCGACGCCCGGAGCAGGCACCCGCGTGACCATCGCGCGCTGGA AGTAG
Upstream 100 bases:
>100_bases CTGGAGCTCACCGGCATCAGGACCGCGCTCAACGTCGAGCGGGGCATGGCGCTGATCCAGGCCCGGATTTCCGAGGAGGA CGACGGACACGGGAGCGACC
Downstream 100 bases:
>100_bases GCATGGACCGCGTCACCGTCACCGAAGCGAGCCAGGTTGCCGAGGCGCGGCGACGGGCCGTCGCCGCCGCGCAATCCATC GGCTTCGACGAGACCGCGGC
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTVTKTETLPVRSGDDVVRVRQRVRALAVEIGLGLVDQTKIITAASELARNTLDYGGGGDVFLEIVQAGMRKGLRLTFED QGPGIADIDQAMTDHFTSGGGLGLGLGGAKRLSNEFHIESTPGAGTRVTIARWK
Sequences:
>Translated_134_residues MTVTKTETLPVRSGDDVVRVRQRVRALAVEIGLGLVDQTKIITAASELARNTLDYGGGGDVFLEIVQAGMRKGLRLTFED QGPGIADIDQAMTDHFTSGGGLGLGLGGAKRLSNEFHIESTPGAGTRVTIARWK >Mature_133_residues TVTKTETLPVRSGDDVVRVRQRVRALAVEIGLGLVDQTKIITAASELARNTLDYGGGGDVFLEIVQAGMRKGLRLTFEDQ GPGIADIDQAMTDHFTSGGGLGLGLGGAKRLSNEFHIESTPGAGTRVTIARWK
Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 14222; Mature: 14091
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTKTETLPVRSGDDVVRVRQRVRALAVEIGLGLVDQTKIITAASELARNTLDYGGGGD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHH VFLEIVQAGMRKGLRLTFEDQGPGIADIDQAMTDHFTSGGGLGLGLGGAKRLSNEFHIES HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCEEEEC TPGAGTRVTIARWK CCCCCCEEEEEECC >Mature Secondary Structure TVTKTETLPVRSGDDVVRVRQRVRALAVEIGLGLVDQTKIITAASELARNTLDYGGGGD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHH VFLEIVQAGMRKGLRLTFEDQGPGIADIDQAMTDHFTSGGGLGLGLGGAKRLSNEFHIES HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCEEEEC TPGAGTRVTIARWK CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]