| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751547
Identifier: 170751547
GI number: 170751547
Start: 5493937
End: 5495355
Strand: Direct
Name: 170751547
Synonym: Mrad2831_5167
Alternate gene names: NA
Gene position: 5493937-5495355 (Clockwise)
Preceding gene: 170751546
Following gene: 170751548
Centisome position: 90.39
GC content: 65.68
Gene sequence:
>1419_bases ATGGCAGCCGGCGCTGAGGACATCCATCGCCTGTTCGAGTTCGAGCAGCGCAACCGCTCGCGCGAGAAGCCGAAGAGCAA CGGCGACCTGCTCACGGAGGACTGGGCTGCCCGCACCTTCGCCGAGCGCCGGGTCGGGGACCTGCTATTCTGCCACGATA CCGGGAAGTGGCACACGTGGACCGGTGCGGCTTGGCGACCGAACAGGTGCGGCCTCGCCTTCCAGTGGGCCCGCGAGCTC GCCCGCGAGATGTGCGAGAACGAGGAGCCCAAGACCCGGTTCATCGCCTCGAAGACCGCCTTTGCGGCCGGTGTGGAGCG TTTCTCCCGTTCGGACCCGGTCTTCGCGGTCACCATCGAGGGCTGGGACGCGGACCCGTGGCTGCTCGGCACGCCCGGAG GAACGGTCGACCTGCGGACCGGCAAACTGCGGGAGGCCGATCGGGCCGACCGCATCACGAAACTGACCGCGGTCGCGCCA GCCGAAACGCCGGAGTGCCCGACGTGGCTGAAGTTCTTGGATGACGTCACCCAGGGCGATGCCGGCTACATCCGGTTCCT GCAGCAGTGGGCTGGGTACTGCCTGACGGGCGATACCAGCGAGCAGGCCCTGTGCTTCGCCTACGGCGGCGGAGGCAACG GCAAGGGCGTCTTGATCCACGTCCTGGCGGGGATCCTAGCCGACTACGCGGTGAACGCCGCGATGGAGACGTTCACCGCC GCCAAGCACGACCGGCATCCGACGGAGATCGCGGCGCTACGCGGCGCACGCCTCGTGACGGCTTCGGAAACGGAGCAGGG CCGGCAGTGGGCCGAGGCCAGGATCAAGCAGCTGACCGGCGGCGACACGATGCGCGCCCGGTACATGCGACAGGACGAGT TCGAGTTCACGCCCGTCCTGAAGCTGCTCATCATCGGCAACAACAAGCCTGGCTTGTCGAGCGTGGACGACGCCGCTCGG CGACGGTTCAACCTGTTGCCGTTCCTGTTCAAGCCGGCCGTGCCGGACCCGCAGCTCGAGGAGAAGCTGCGGAAGGAATG GCCTCAGATCCTGCGGTGGATGATCGAGGGCTGCTTGGACTGGCAGGCCCACCGTCTCGTCCGGCCCGAAGTCGTGAAGG ATGCGACAGACGAGTATTTTGAGCAGCAGGATACCTTTGGGCAGTGGTTGGACGCGCGCTGCATCGTCGACAAAGGCAAT CCTTACCGTAAGGCTACAACTCAGGAGCTGTTCGCGTCCTGGGCCGACTTCGCGCGGGGTAGCAACGAGTTGGTTGGCAC TATGCATAGCTTCGGAGATCGTCTCGATAAGCTCGGCTTCAAGAAGAACAAGAACGTCCCGACCGGGGTGAATGGCCGCG CTCGCGGGTACGAGGGGATCGAGGTCCGGCCACTCCCCACTAGGGAATTCGAGTCATGA
Upstream 100 bases:
>100_bases TGGAACGAGACGCGGTGCCGGCCGCCTCTGACGCCGGAGGAGGTCACGAAGACCGTCGGCTCGATCGCCCGAAAGGAACT CCGTCGCAGGGAGGCGCAGC
Downstream 100 bases:
>100_bases GGCGCTTTGAGGCGCTTTCTCCGTACTGCACGCACAGGCGCACGCGCGTATGGGAGGTAACGGGACAATCCGCCTCAAAG CGCCTCACCGCCTCAGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Phage DNA Polymerase; Phage/Plasmid Primase; Phage Primase; Primase; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; Phage-Associated Protein; Phage/Plasmid DNA Primase; DNA Primase; Phage/Plasmid Primase P4-Like; Bacteriophage-Related Protein; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Prophage; Plasmid/Phage Primase; Bacteriophage Protein; Primase P4-Like Protein; Phage Or Plasmid Primase P4-Like; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MAAGAEDIHRLFEFEQRNRSREKPKSNGDLLTEDWAARTFAERRVGDLLFCHDTGKWHTWTGAAWRPNRCGLAFQWAREL AREMCENEEPKTRFIASKTAFAAGVERFSRSDPVFAVTIEGWDADPWLLGTPGGTVDLRTGKLREADRADRITKLTAVAP AETPECPTWLKFLDDVTQGDAGYIRFLQQWAGYCLTGDTSEQALCFAYGGGGNGKGVLIHVLAGILADYAVNAAMETFTA AKHDRHPTEIAALRGARLVTASETEQGRQWAEARIKQLTGGDTMRARYMRQDEFEFTPVLKLLIIGNNKPGLSSVDDAAR RRFNLLPFLFKPAVPDPQLEEKLRKEWPQILRWMIEGCLDWQAHRLVRPEVVKDATDEYFEQQDTFGQWLDARCIVDKGN PYRKATTQELFASWADFARGSNELVGTMHSFGDRLDKLGFKKNKNVPTGVNGRARGYEGIEVRPLPTREFES
Sequences:
>Translated_472_residues MAAGAEDIHRLFEFEQRNRSREKPKSNGDLLTEDWAARTFAERRVGDLLFCHDTGKWHTWTGAAWRPNRCGLAFQWAREL AREMCENEEPKTRFIASKTAFAAGVERFSRSDPVFAVTIEGWDADPWLLGTPGGTVDLRTGKLREADRADRITKLTAVAP AETPECPTWLKFLDDVTQGDAGYIRFLQQWAGYCLTGDTSEQALCFAYGGGGNGKGVLIHVLAGILADYAVNAAMETFTA AKHDRHPTEIAALRGARLVTASETEQGRQWAEARIKQLTGGDTMRARYMRQDEFEFTPVLKLLIIGNNKPGLSSVDDAAR RRFNLLPFLFKPAVPDPQLEEKLRKEWPQILRWMIEGCLDWQAHRLVRPEVVKDATDEYFEQQDTFGQWLDARCIVDKGN PYRKATTQELFASWADFARGSNELVGTMHSFGDRLDKLGFKKNKNVPTGVNGRARGYEGIEVRPLPTREFES >Mature_471_residues AAGAEDIHRLFEFEQRNRSREKPKSNGDLLTEDWAARTFAERRVGDLLFCHDTGKWHTWTGAAWRPNRCGLAFQWARELA REMCENEEPKTRFIASKTAFAAGVERFSRSDPVFAVTIEGWDADPWLLGTPGGTVDLRTGKLREADRADRITKLTAVAPA ETPECPTWLKFLDDVTQGDAGYIRFLQQWAGYCLTGDTSEQALCFAYGGGGNGKGVLIHVLAGILADYAVNAAMETFTAA KHDRHPTEIAALRGARLVTASETEQGRQWAEARIKQLTGGDTMRARYMRQDEFEFTPVLKLLIIGNNKPGLSSVDDAARR RFNLLPFLFKPAVPDPQLEEKLRKEWPQILRWMIEGCLDWQAHRLVRPEVVKDATDEYFEQQDTFGQWLDARCIVDKGNP YRKATTQELFASWADFARGSNELVGTMHSFGDRLDKLGFKKNKNVPTGVNGRARGYEGIEVRPLPTREFES
Specific function: Unknown
COG id: COG3378
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53296; Mature: 53164
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGAEDIHRLFEFEQRNRSREKPKSNGDLLTEDWAARTFAERRVGDLLFCHDTGKWHTW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCCEEEC TGAAWRPNRCGLAFQWARELAREMCENEEPKTRFIASKTAFAAGVERFSRSDPVFAVTIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GWDADPWLLGTPGGTVDLRTGKLREADRADRITKLTAVAPAETPECPTWLKFLDDVTQGD CCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCC AGYIRFLQQWAGYCLTGDTSEQALCFAYGGGGNGKGVLIHVLAGILADYAVNAAMETFTA HHHHHHHHHHCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKHDRHPTEIAALRGARLVTASETEQGRQWAEARIKQLTGGDTMRARYMRQDEFEFTPVL HHCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCEE KLLIIGNNKPGLSSVDDAARRRFNLLPFLFKPAVPDPQLEEKLRKEWPQILRWMIEGCLD EEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQAHRLVRPEVVKDATDEYFEQQDTFGQWLDARCIVDKGNPYRKATTQELFASWADFARG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCC SNELVGTMHSFGDRLDKLGFKKNKNVPTGVNGRARGYEGIEVRPLPTREFES CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure AAGAEDIHRLFEFEQRNRSREKPKSNGDLLTEDWAARTFAERRVGDLLFCHDTGKWHTW CCCHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCEEEEECCCCEEEC TGAAWRPNRCGLAFQWARELAREMCENEEPKTRFIASKTAFAAGVERFSRSDPVFAVTIE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE GWDADPWLLGTPGGTVDLRTGKLREADRADRITKLTAVAPAETPECPTWLKFLDDVTQGD CCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCC AGYIRFLQQWAGYCLTGDTSEQALCFAYGGGGNGKGVLIHVLAGILADYAVNAAMETFTA HHHHHHHHHHCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKHDRHPTEIAALRGARLVTASETEQGRQWAEARIKQLTGGDTMRARYMRQDEFEFTPVL HHCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCEE KLLIIGNNKPGLSSVDDAARRRFNLLPFLFKPAVPDPQLEEKLRKEWPQILRWMIEGCLD EEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQAHRLVRPEVVKDATDEYFEQQDTFGQWLDARCIVDKGNPYRKATTQELFASWADFARG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCC SNELVGTMHSFGDRLDKLGFKKNKNVPTGVNGRARGYEGIEVRPLPTREFES CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA