| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751546
Identifier: 170751546
GI number: 170751546
Start: 5493084
End: 5493953
Strand: Direct
Name: 170751546
Synonym: Mrad2831_5166
Alternate gene names: NA
Gene position: 5493084-5493953 (Clockwise)
Preceding gene: 170751545
Following gene: 170751547
Centisome position: 90.38
GC content: 71.26
Gene sequence:
>870_bases ATGAGCGATCGCCTCGACACCGCCCTCTACCTCGCGCGCCACGGCGCTAAGGTCTTCCCGCTGCACGGGGTGCTGGAGGA TTCGTCCGGCCGCCTCGTCTGCACGTGCGGGAAGGCCGACTGCCGGGACATCGGCAAACACCCGATGGCGAGGCTTGCCC CACGCGGGCTGATCAATGCCACGACGCACGAACACATCGTGCGGGCGTGGTTCACCAGTGCGCCCCAAGCCAACATCGGC ATGGCGACGGGCACGACGGTGGTCTTGGACGTCGACCCCCGCCATGGCGGCGACGCCAGCCTCGAAGCGCTCGAGGCCGA GCACGGACCGTTGCCGGAGACGACGCGGGCACTGACCGGCGGCGGCGGCCAGCACATCCTGTTCCGAGCGCCTGCGGACG TGGAGATCCGGAACAGCGCCGGCGATCAGGGCGGACTCGCCCCCGGCCTCGATATCCGCGGAGCCGGCGGGTACATCGTC GCCCCGTCCAGCCGGCATGCGTCCGGGCGGTACTACGCATGGTCGGTGGACCATCACCCCGACGACGTGCCGCCGGCCGA GATGCCGGATTGGCTCGTCCAGGCCCTCTCCCGGACCGGAGAGGGCGCCGCGGCCCGGGATCCGTCCGAATGGCGCAACC TCGTGGCCGAGGGGGTCGTCGACGGCGGCCGCAACGTCGCGGTGTCGAAGCTCACCGGGCATCTGCTGCGCCGCTACGTC GATCCGGAGGTCGCCCACGAGCTCGTCCAGGCCTGGAACGAGACGCGGTGCCGGCCGCCTCTGACGCCGGAGGAGGTCAC GAAGACCGTCGGCTCGATCGCCCGAAAGGAACTCCGTCGCAGGGAGGCGCAGCATGGCAGCCGGCGCTGA
Upstream 100 bases:
>100_bases CCCGGTACGCCGAACAGCATCCGGCGATGGTCGATCGTGAGGCGGCGCTCCGCAAGGCGCTGGTCGAGGCCGGTAGGCCG CCGCGGAACGGGGTGACGCC
Downstream 100 bases:
>100_bases GGACATCCATCGCCTGTTCGAGTTCGAGCAGCGCAACCGCTCGCGCGAGAAGCCGAAGAGCAACGGCGACCTGCTCACGG AGGACTGGGCTGCCCGCACC
Product: bifunctional DNA primase/polymerase
Products: NA
Alternate protein names: P4 Family Phage/Plasmid Primase; N- Superfamily Bifunctional DNA Primase/Polymerase; Prophage Lp4 DNA Replication; Phage Protein; Hyphotheical Protein; Phage-Related DNA Replication Protein; Bifunctional DNA Primase/Polymerase N-Terminal Family; Phage/Plasmid Primase P4 Family
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSDRLDTALYLARHGAKVFPLHGVLEDSSGRLVCTCGKADCRDIGKHPMARLAPRGLINATTHEHIVRAWFTSAPQANIG MATGTTVVLDVDPRHGGDASLEALEAEHGPLPETTRALTGGGGQHILFRAPADVEIRNSAGDQGGLAPGLDIRGAGGYIV APSSRHASGRYYAWSVDHHPDDVPPAEMPDWLVQALSRTGEGAAARDPSEWRNLVAEGVVDGGRNVAVSKLTGHLLRRYV DPEVAHELVQAWNETRCRPPLTPEEVTKTVGSIARKELRRREAQHGSRR
Sequences:
>Translated_289_residues MSDRLDTALYLARHGAKVFPLHGVLEDSSGRLVCTCGKADCRDIGKHPMARLAPRGLINATTHEHIVRAWFTSAPQANIG MATGTTVVLDVDPRHGGDASLEALEAEHGPLPETTRALTGGGGQHILFRAPADVEIRNSAGDQGGLAPGLDIRGAGGYIV APSSRHASGRYYAWSVDHHPDDVPPAEMPDWLVQALSRTGEGAAARDPSEWRNLVAEGVVDGGRNVAVSKLTGHLLRRYV DPEVAHELVQAWNETRCRPPLTPEEVTKTVGSIARKELRRREAQHGSRR >Mature_288_residues SDRLDTALYLARHGAKVFPLHGVLEDSSGRLVCTCGKADCRDIGKHPMARLAPRGLINATTHEHIVRAWFTSAPQANIGM ATGTTVVLDVDPRHGGDASLEALEAEHGPLPETTRALTGGGGQHILFRAPADVEIRNSAGDQGGLAPGLDIRGAGGYIVA PSSRHASGRYYAWSVDHHPDDVPPAEMPDWLVQALSRTGEGAAARDPSEWRNLVAEGVVDGGRNVAVSKLTGHLLRRYVD PEVAHELVQAWNETRCRPPLTPEEVTKTVGSIARKELRRREAQHGSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31139; Mature: 31008
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLDTALYLARHGAKVFPLHGVLEDSSGRLVCTCGKADCRDIGKHPMARLAPRGLINA CCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHCCCCCCCC TTHEHIVRAWFTSAPQANIGMATGTTVVLDVDPRHGGDASLEALEAEHGPLPETTRALTG HHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCC GGGQHILFRAPADVEIRNSAGDQGGLAPGLDIRGAGGYIVAPSSRHASGRYYAWSVDHHP CCCCEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCEEEEECCCCC DDVPPAEMPDWLVQALSRTGEGAAARDPSEWRNLVAEGVVDGGRNVAVSKLTGHLLRRYV CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC DPEVAHELVQAWNETRCRPPLTPEEVTKTVGSIARKELRRREAQHGSRR CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDRLDTALYLARHGAKVFPLHGVLEDSSGRLVCTCGKADCRDIGKHPMARLAPRGLINA CCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHCCCCCCCC TTHEHIVRAWFTSAPQANIGMATGTTVVLDVDPRHGGDASLEALEAEHGPLPETTRALTG HHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHCC GGGQHILFRAPADVEIRNSAGDQGGLAPGLDIRGAGGYIVAPSSRHASGRYYAWSVDHHP CCCCEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCEEEEECCCCC DDVPPAEMPDWLVQALSRTGEGAAARDPSEWRNLVAEGVVDGGRNVAVSKLTGHLLRRYV CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC DPEVAHELVQAWNETRCRPPLTPEEVTKTVGSIARKELRRREAQHGSRR CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA