| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gudP [H]
Identifier: 170751531
GI number: 170751531
Start: 5477523
End: 5478878
Strand: Direct
Name: gudP [H]
Synonym: Mrad2831_5151
Alternate gene names: 170751531
Gene position: 5477523-5478878 (Clockwise)
Preceding gene: 170751530
Following gene: 170751532
Centisome position: 90.12
GC content: 69.99
Gene sequence:
>1356_bases ATGAGTGCCAGTTCGACCGGCGCGCCGAGCACCCTGCTCGCCGCCGCCGACGCGGGTCGCCGCACCCGCGTCCGCCTGCT GATCGTGGCGATGCTGTTCGCCGCCACGACGATCAACTACGCCGACCGCGCGACCATCTCGATCGCCGGGCCCGACATGG CCAAGGAACTCGGCCTCTCGCCGGTCCAGATGGGCTACGTCTTCTCGGCCTTCGCGTGGTCCTACGTCCTCGCCCAGATC CCGGGCGGCTGGCTCCTCGACCGCTACAGCGTCAAGTGGGTCTACGCCGCCGCCGTCGCCCTCTGGTCGGCCTTCACGCT GGTCCAGGGCGCCGTGGGCTTCTTCACCGGCCTGACCGCCGTGGTGCTGCTCTTCGCCCTGCGGCTCGCCGTCGGCCTCA CCGAGGCGCCGGTCTTCCCCGCCAACGCCCGGATCGTCGCCGCGTGGTTCCCGACCCGGGAGCGCGGCATGGCCTCGGCG TTCTTCAACTCGGCGCAGTACTTCGCCACGGTGCTGTTCACGCCGCTGATGGCGTGGATCGTCCACACGTTCGGCTGGCA CCACGTCTTCACCAGCATGGGCCTGCTCGGCATCGCCTTCGCGGTGCTGTGGCTGCGCGTCGTCGACAGCCCGAAGCACC ACCCGGCGATGAACCAGGCGGAGCGGGACTACATCGAGGCCGGCGGCGCGCTGCTCGACATGGACGGCCAGAGCCGGGGC AGGCAGGGCGATGCCGGCCGGACGCTGCGCCAGCTGCTCGCCAACCGGATGCTGCTCGGCATCTATGTCGGCCAGTACTG CATCACGGTGCTGACCTACTTCTTCCTGACGTGGTTCCCGGTCTACCTCGTCAAGGAGCGCGGCCTGTCGATCCTGCAGG CCGGCTTCGCGGCGGTGCTGCCGGCGCTGTGCGGCTTCGTCGGCGGCATCCTCGGGGGCGTGATCTCCGACCTGCTCCTG CGCCGTGGCTTCTCGCTGACGGCGGCCCGCAAGATCCCGATCGTCGGCGGCATGCTGCTGTCGATGAGCATCATCGGCTG CAACTACGTCCAGGCGGACGCGGTCGTGGTCGGGCTGATGGCGCTGGCCTTCTTCGGCAAGGGCATCGGCGCGCTCGGCT GGGCGGTCGTCGCCGACACCTCGCCGCGGGAGAGCGGCGGCCTCTCGGGCGGCCTGTTCAACACCTTCGGCAACACCGCC GGCATCACCACGCCGATCGCGATCGGCTACATCGTCCAGAGCACGGGCTCGTTCAACGGCGCCCTGGTCTTCGTCGGCCT GAACGCCCTCGTCGCCTGCTTCTGCTACCTCGTGGTGGTCGGGGAGATCCGCCGCGTCGAGCTCAAGGCCCACTGA
Upstream 100 bases:
>100_bases GAGCCCCCGCCTCGACACCCAAGACGGATCCGCCGAGCCAACGGCGGCCACGACCCGCTTCCCGGATCAACCGGGTGGCG ACGAGCCAGGGAGAACGTCC
Downstream 100 bases:
>100_bases CCCGCCCACCGGGCCGGCCCCGTCCGGACCGGCCCCGCATCGATCCCGCCCCGCGCCCGGCGAAGACCGGCCGGGGGCCC CCGAGGAGGACGCCATGGAT
Product: d-galactonate transporter
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSASSTGAPSTLLAAADAGRRTRVRLLIVAMLFAATTINYADRATISIAGPDMAKELGLSPVQMGYVFSAFAWSYVLAQI PGGWLLDRYSVKWVYAAAVALWSAFTLVQGAVGFFTGLTAVVLLFALRLAVGLTEAPVFPANARIVAAWFPTRERGMASA FFNSAQYFATVLFTPLMAWIVHTFGWHHVFTSMGLLGIAFAVLWLRVVDSPKHHPAMNQAERDYIEAGGALLDMDGQSRG RQGDAGRTLRQLLANRMLLGIYVGQYCITVLTYFFLTWFPVYLVKERGLSILQAGFAAVLPALCGFVGGILGGVISDLLL RRGFSLTAARKIPIVGGMLLSMSIIGCNYVQADAVVVGLMALAFFGKGIGALGWAVVADTSPRESGGLSGGLFNTFGNTA GITTPIAIGYIVQSTGSFNGALVFVGLNALVACFCYLVVVGEIRRVELKAH
Sequences:
>Translated_451_residues MSASSTGAPSTLLAAADAGRRTRVRLLIVAMLFAATTINYADRATISIAGPDMAKELGLSPVQMGYVFSAFAWSYVLAQI PGGWLLDRYSVKWVYAAAVALWSAFTLVQGAVGFFTGLTAVVLLFALRLAVGLTEAPVFPANARIVAAWFPTRERGMASA FFNSAQYFATVLFTPLMAWIVHTFGWHHVFTSMGLLGIAFAVLWLRVVDSPKHHPAMNQAERDYIEAGGALLDMDGQSRG RQGDAGRTLRQLLANRMLLGIYVGQYCITVLTYFFLTWFPVYLVKERGLSILQAGFAAVLPALCGFVGGILGGVISDLLL RRGFSLTAARKIPIVGGMLLSMSIIGCNYVQADAVVVGLMALAFFGKGIGALGWAVVADTSPRESGGLSGGLFNTFGNTA GITTPIAIGYIVQSTGSFNGALVFVGLNALVACFCYLVVVGEIRRVELKAH >Mature_450_residues SASSTGAPSTLLAAADAGRRTRVRLLIVAMLFAATTINYADRATISIAGPDMAKELGLSPVQMGYVFSAFAWSYVLAQIP GGWLLDRYSVKWVYAAAVALWSAFTLVQGAVGFFTGLTAVVLLFALRLAVGLTEAPVFPANARIVAAWFPTRERGMASAF FNSAQYFATVLFTPLMAWIVHTFGWHHVFTSMGLLGIAFAVLWLRVVDSPKHHPAMNQAERDYIEAGGALLDMDGQSRGR QGDAGRTLRQLLANRMLLGIYVGQYCITVLTYFFLTWFPVYLVKERGLSILQAGFAAVLPALCGFVGGILGGVISDLLLR RGFSLTAARKIPIVGGMLLSMSIIGCNYVQADAVVVGLMALAFFGKGIGALGWAVVADTSPRESGGLSGGLFNTFGNTAG ITTPIAIGYIVQSTGSFNGALVFVGLNALVACFCYLVVVGEIRRVELKAH
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9966811, Length=399, Percent_Identity=26.0651629072682, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI9945322, Length=415, Percent_Identity=26.5060240963855, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI21322234, Length=380, Percent_Identity=24.2105263157895, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI6912666, Length=454, Percent_Identity=24.4493392070485, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI4885441, Length=384, Percent_Identity=26.8229166666667, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI148743791, Length=384, Percent_Identity=25.5208333333333, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI154350196, Length=421, Percent_Identity=23.5154394299287, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI5031955, Length=297, Percent_Identity=26.2626262626263, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI223718438, Length=211, Percent_Identity=27.9620853080569, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI148728191, Length=311, Percent_Identity=25.7234726688103, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI154800443, Length=324, Percent_Identity=24.0740740740741, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI256219598, Length=296, Percent_Identity=22.6351351351351, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4503847, Length=296, Percent_Identity=22.6351351351351, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI256219483, Length=296, Percent_Identity=22.6351351351351, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI256219543, Length=296, Percent_Identity=22.6351351351351, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1789152, Length=439, Percent_Identity=60.8200455580866, Blast_Score=563, Evalue=1e-162, Organism=Escherichia coli, GI1789515, Length=442, Percent_Identity=55.4298642533937, Blast_Score=513, Evalue=1e-146, Organism=Escherichia coli, GI87082320, Length=434, Percent_Identity=42.3963133640553, Blast_Score=353, Evalue=1e-98, Organism=Escherichia coli, GI2367379, Length=426, Percent_Identity=29.1079812206573, Blast_Score=174, Evalue=7e-45, Organism=Escherichia coli, GI2367193, Length=325, Percent_Identity=27.6923076923077, Blast_Score=128, Evalue=9e-31, Organism=Escherichia coli, GI1788573, Length=459, Percent_Identity=23.7472766884532, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533554, Length=423, Percent_Identity=26.9503546099291, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533556, Length=423, Percent_Identity=26.9503546099291, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI32565914, Length=272, Percent_Identity=24.2647058823529, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32565916, Length=272, Percent_Identity=24.2647058823529, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560030, Length=363, Percent_Identity=23.6914600550964, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193205400, Length=289, Percent_Identity=22.8373702422145, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71997452, Length=412, Percent_Identity=22.8155339805825, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17569727, Length=281, Percent_Identity=22.7758007117438, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17535049, Length=421, Percent_Identity=22.5653206650831, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17552542, Length=415, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17554148, Length=363, Percent_Identity=23.6914600550964, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25141318, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25141341, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI86561091, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25141316, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550460, Length=417, Percent_Identity=27.8177458033573, Blast_Score=118, Evalue=9e-27, Organism=Drosophila melanogaster, GI24641682, Length=463, Percent_Identity=27.645788336933, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24655255, Length=375, Percent_Identity=28.2666666666667, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24639764, Length=441, Percent_Identity=24.7165532879819, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24583789, Length=404, Percent_Identity=25, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI62484226, Length=392, Percent_Identity=26.2755102040816, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI20130135, Length=408, Percent_Identity=25.7352941176471, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24655271, Length=408, Percent_Identity=25.7352941176471, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24584153, Length=408, Percent_Identity=23.2843137254902, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI28573299, Length=411, Percent_Identity=27.2506082725061, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI28573708, Length=438, Percent_Identity=25.3424657534247, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI28573707, Length=438, Percent_Identity=25.3424657534247, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI19922400, Length=418, Percent_Identity=26.555023923445, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24654215, Length=418, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI20130167, Length=422, Percent_Identity=24.4075829383886, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24580790, Length=390, Percent_Identity=24.8717948717949, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI221474708, Length=293, Percent_Identity=27.3037542662116, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24658658, Length=460, Percent_Identity=22.6086956521739, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24658666, Length=437, Percent_Identity=23.5697940503432, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24653727, Length=373, Percent_Identity=25.201072386059, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24658689, Length=442, Percent_Identity=24.6606334841629, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24648416, Length=431, Percent_Identity=22.5058004640371, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356189, Length=431, Percent_Identity=22.5058004640371, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI45552797, Length=423, Percent_Identity=25.0591016548463, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI45550364, Length=430, Percent_Identity=23.4883720930233, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24658674, Length=411, Percent_Identity=23.3576642335766, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129235, Length=396, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI17864456, Length=387, Percent_Identity=24.2894056847545, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654039, Length=387, Percent_Identity=24.2894056847545, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI19920686, Length=393, Percent_Identity=22.9007633587786, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48069; Mature: 47938
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASSTGAPSTLLAAADAGRRTRVRLLIVAMLFAATTINYADRATISIAGPDMAKELGLS CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCC PVQMGYVFSAFAWSYVLAQIPGGWLLDRYSVKWVYAAAVALWSAFTLVQGAVGFFTGLTA HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLLFALRLAVGLTEAPVFPANARIVAAWFPTRERGMASAFFNSAQYFATVLFTPLMAWI HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHTFGWHHVFTSMGLLGIAFAVLWLRVVDSPKHHPAMNQAERDYIEAGGALLDMDGQSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCC RQGDAGRTLRQLLANRMLLGIYVGQYCITVLTYFFLTWFPVYLVKERGLSILQAGFAAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PALCGFVGGILGGVISDLLLRRGFSLTAARKIPIVGGMLLSMSIIGCNYVQADAVVVGLM HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH ALAFFGKGIGALGWAVVADTSPRESGGLSGGLFNTFGNTAGITTPIAIGYIVQSTGSFNG HHHHHHCCHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCC ALVFVGLNALVACFCYLVVVGEIRRVELKAH EEEEEEHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SASSTGAPSTLLAAADAGRRTRVRLLIVAMLFAATTINYADRATISIAGPDMAKELGLS CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCC PVQMGYVFSAFAWSYVLAQIPGGWLLDRYSVKWVYAAAVALWSAFTLVQGAVGFFTGLTA HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLLFALRLAVGLTEAPVFPANARIVAAWFPTRERGMASAFFNSAQYFATVLFTPLMAWI HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHTFGWHHVFTSMGLLGIAFAVLWLRVVDSPKHHPAMNQAERDYIEAGGALLDMDGQSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCC RQGDAGRTLRQLLANRMLLGIYVGQYCITVLTYFFLTWFPVYLVKERGLSILQAGFAAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PALCGFVGGILGGVISDLLLRRGFSLTAARKIPIVGGMLLSMSIIGCNYVQADAVVVGLM HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH ALAFFGKGIGALGWAVVADTSPRESGGLSGGLFNTFGNTAGITTPIAIGYIVQSTGSFNG HHHHHHCCHHHHHHEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCC ALVFVGLNALVACFCYLVVVGEIRRVELKAH EEEEEEHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7704254; 9384377 [H]