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The map label for this gene is yjhH [C]

Identifier: 170751530

GI number: 170751530

Start: 5476510

End: 5477424

Strand: Direct

Name: yjhH [C]

Synonym: Mrad2831_5150

Alternate gene names: 170751530

Gene position: 5476510-5477424 (Clockwise)

Preceding gene: 170751527

Following gene: 170751531

Centisome position: 90.11

GC content: 72.79

Gene sequence:

>915_bases
ATGGCGAGCATGACCCCGGCCGAGATGGCGCGCGTGCTGGGCTCCGGCCTGCTGTCGTTCCCGGTCACGCATTTCCGCGA
CGACCTCAGCTTCGACGAGACCGCCTACCGGGACAATCTCGGACGCCTCGCCGACTACAAGGTGTCGGGCCTGTTCGCCG
CCGGCGGCACCGGCGAGTTCTTCTCGCTGACGCCCGCCGAGATCGACCGCGTCCTGCGCGCCGCCGTCGAGGAGACCCGC
GGCCGGACGCCGGTCATCGCCCCCGCCGGCCAGGGCACCGCCCTGGCGGTCGAGATGGCCCGGGCCGCCGAGGCCGCCGG
CGCGGACGGGATCCTGCTGCTGCCGCCCTACCTGGTCGGCTCCGAGCAGGCCGGTCTCGCCGCCCATATCGAGGCGGTCT
GCCGCGCGACCGCCCTGGGGATCATCGTCTACAACCGCGCCAACGCCCAGCTCGACGAGCGGACGCTGGCCGGCCTGTGC
GAGCGCTGCCCGAACCTCGTCGGCTTCAAGGACGGCGTCGGCGACGTCGAGCTGATGACCCGGGTCTACGCGGCGCTGGG
CGACCGCCTGACCTATATCGGCGGCCTGCCCACCGCCGAGACCTTCGCGCTGCCGTACCTGGAGATGGGCGTCACCACCT
ACTCCTCGGCGATCTTCAACTTCCTGCCGGAATGGGCGCTGTCCTTCTACGACAGCGTCCGCCGCCGGGACCGCGACGCG
GTCTACCGGGAGCTGCGCGACTTCGTCCTCCCCTACATCGCGATCCGCAACCGCAAGCGCGGCTACGCGGTCTCGATCGT
CAAGGCGGGCATGAGCGCCGTCGGCCGCCACGCCGGCCCGGTCCGGCCGCCGCTGACCGAGCTCGACGCGGCCGAGCGCG
CCGAGCTGACGGCCCTGATCGGCGACCGCCGCTGA

Upstream 100 bases:

>100_bases
GGATCCGGGATAATCCAGCCAAAATCAACGTTGGACGCATTTAACGCCGGCGCCTAACCCCGGACGCGACACCGAACGGT
GCGTTCCAGGGAGAGGATCG

Downstream 100 bases:

>100_bases
GCCCCCGCCTCGACACCCAAGACGGATCCGCCGAGCCAACGGCGGCCACGACCCGCTTCCCGGATCAACCGGGTGGCGAC
GAGCCAGGGAGAACGTCCAT

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MASMTPAEMARVLGSGLLSFPVTHFRDDLSFDETAYRDNLGRLADYKVSGLFAAGGTGEFFSLTPAEIDRVLRAAVEETR
GRTPVIAPAGQGTALAVEMARAAEAAGADGILLLPPYLVGSEQAGLAAHIEAVCRATALGIIVYNRANAQLDERTLAGLC
ERCPNLVGFKDGVGDVELMTRVYAALGDRLTYIGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYDSVRRRDRDA
VYRELRDFVLPYIAIRNRKRGYAVSIVKAGMSAVGRHAGPVRPPLTELDAAERAELTALIGDRR

Sequences:

>Translated_304_residues
MASMTPAEMARVLGSGLLSFPVTHFRDDLSFDETAYRDNLGRLADYKVSGLFAAGGTGEFFSLTPAEIDRVLRAAVEETR
GRTPVIAPAGQGTALAVEMARAAEAAGADGILLLPPYLVGSEQAGLAAHIEAVCRATALGIIVYNRANAQLDERTLAGLC
ERCPNLVGFKDGVGDVELMTRVYAALGDRLTYIGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYDSVRRRDRDA
VYRELRDFVLPYIAIRNRKRGYAVSIVKAGMSAVGRHAGPVRPPLTELDAAERAELTALIGDRR
>Mature_303_residues
ASMTPAEMARVLGSGLLSFPVTHFRDDLSFDETAYRDNLGRLADYKVSGLFAAGGTGEFFSLTPAEIDRVLRAAVEETRG
RTPVIAPAGQGTALAVEMARAAEAAGADGILLLPPYLVGSEQAGLAAHIEAVCRATALGIIVYNRANAQLDERTLAGLCE
RCPNLVGFKDGVGDVELMTRVYAALGDRLTYIGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYDSVRRRDRDAV
YRELRDFVLPYIAIRNRKRGYAVSIVKAGMSAVGRHAGPVRPPLTELDAAERAELTALIGDRR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family

Homologues:

Organism=Escherichia coli, GI87082415, Length=292, Percent_Identity=28.7671232876712, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786463, Length=289, Percent_Identity=24.9134948096886, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788823, Length=182, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KDGD_METRJ (B1LW44)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001757790.1
- ProteinModelPortal:   B1LW44
- GeneID:   6141220
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_5150
- HOGENOM:   HBG358848
- OMA:   RNRKKGY
- ProtClustDB:   PRK03620
- HAMAP:   MF_00694
- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR12128
- TIGRFAMs:   TIGR03249

Pfam domain/function: PF00701 DHDPS

EC number: =4.2.1.41

Molecular weight: Translated: 32809; Mature: 32678

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMTPAEMARVLGSGLLSFPVTHFRDDLSFDETAYRDNLGRLADYKVSGLFAAGGTGEF
CCCCCHHHHHHHHHCHHHHCCHHHHHCCCCCCHHHHHHHHCHHHCCCEEEEEEECCCCCC
FSLTPAEIDRVLRAAVEETRGRTPVIAPAGQGTALAVEMARAAEAAGADGILLLPPYLVG
EECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEC
SEQAGLAAHIEAVCRATALGIIVYNRANAQLDERTLAGLCERCPNLVGFKDGVGDVELMT
CCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RVYAALGDRLTYIGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYDSVRRRDRDA
HHHHHHCCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYRELRDFVLPYIAIRNRKRGYAVSIVKAGMSAVGRHAGPVRPPLTELDAAERAELTALI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHH
GDRR
CCCC
>Mature Secondary Structure 
ASMTPAEMARVLGSGLLSFPVTHFRDDLSFDETAYRDNLGRLADYKVSGLFAAGGTGEF
CCCCHHHHHHHHHCHHHHCCHHHHHCCCCCCHHHHHHHHCHHHCCCEEEEEEECCCCCC
FSLTPAEIDRVLRAAVEETRGRTPVIAPAGQGTALAVEMARAAEAAGADGILLLPPYLVG
EECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEC
SEQAGLAAHIEAVCRATALGIIVYNRANAQLDERTLAGLCERCPNLVGFKDGVGDVELMT
CCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RVYAALGDRLTYIGGLPTAETFALPYLEMGVTTYSSAIFNFLPEWALSFYDSVRRRDRDA
HHHHHHCCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYRELRDFVLPYIAIRNRKRGYAVSIVKAGMSAVGRHAGPVRPPLTELDAAERAELTALI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHH
GDRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA