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The map label for this gene is yjcF [C]

Identifier: 170751525

GI number: 170751525

Start: 5470624

End: 5471994

Strand: Reverse

Name: yjcF [C]

Synonym: Mrad2831_5145

Alternate gene names: 170751525

Gene position: 5471994-5470624 (Counterclockwise)

Preceding gene: 170751526

Following gene: 170751522

Centisome position: 90.03

GC content: 73.96

Gene sequence:

>1371_bases
ATGGACCAGGCGACTCCCCCCGACGCGCGACCGGACGCCCCGGCGGACTCGCGGCTGCGCGCGCTCGTCGGCCGGATCGC
CGCCGCGGCGCCCCTGCGCGAGCCGGGCGCGGACCTGTCGCAGCTGAGCGCCGCGCCGGGCGCCCTCGCGGCCGTGCCGG
ATGCCGGCCTCGTCACCGACGCCGAATCCGGCGGCCTGGCGCTCGTCGGCGCGGACCTGTCCCGCGCCCGCATGGAGGAG
GCCGACCTCTCCGGCGCGAACCTGCGCGGGGCGAGCCTCACCGGCGCGGTCGGGCGCTCGACCCGCTTCACCGGGGCGAT
CCTGGAGGCGGCCGACCTGTCCGAGGCCGATCTCTCCGGCGCGGACTTCACCGGCATCGTCGCCGGGCAGGTGAAGTTCG
CCGGGGCGATGCTGGAGGATGCCCGGTTCGGCGAGGCCGCGATGCGCTTCGCCGACCTGTCCGGTGCCCTGCTCGACGGG
ACCGACTTCGCCGGCGCCGATCTCTGGGGCGCGGATTTCTCCGGTGCGGATGCGGACGACACGGTCTTCCGCGGGGCGCG
GCTCGACGAGGCCAAGCTCGCCGACGCCAACCTGACCCACGCGGATTTCGCCGAGGCCAGCCTGACCAAGGCGAGCCTCG
CCGGCTCGCGGCTGCGGGGCGCCCACTTCACCGGCGCGAAGCTCGACGGCGCCGATCTCTCCGGGGCGGATCTCTCCGAC
ACCGACCTCGTGCGGCTCAACCTCGCCACCTGCCGGCTGCGGCACGCCCGCTTCGCCGGCGCGTGGCTCAACGGCACGCG
GATGAGCGTGGAGCAGCTCGGCGGGGCGGTCGGCGAGGAGGTGGCCGGCGCCTACGAGGCCGCCCAGGCGAGCTACCTCG
CCCTGGAGCAGAACTGGAAGAGCATCGGCAGCCACGACGCGGCGAGCTGGGCGTACAAGCGCGGCCGCCGGATGGGCCGT
TTCCACGCCGGGCAGCAGGCCCGCGCCGCGTGGTCCGACCGGGACTGGTCCGGCGTCCTGCGGCACGGCTATCGCTGGAC
CGCCGACCGCTTCGTCGAGTGGTTGTGCGATTACGGCGAGAGCCTGTCGCGCATCGCGCGCGCCTTCGCGCTGCTGATCG
TGCTGTTCGGCGGGCTCTTCGGCCTGACCGGCGGCCTGTACATCCTGGAGGGACCGGACGCCGGGCCGACCTACAACCCC
CTCGATCTCCTGAGCTACAGCGCGCTCAACATGATGACCGCGAACCCGCCGGAGATCGGCCTGAAGCCCACCGGCCGCGT
CACCAACCTTCTGGTCGGCATCGAGGGCGGCGTCGGCATCATCCTGATGGGACTCTACGGCTTCGTCCTGGGCAACCGCC
TGCGACGGTGA

Upstream 100 bases:

>100_bases
CCCCGCCGCCAAGGCGATCACCGTGCGGGTGACGGCCGCGACCGCCGCGCCCTGAGCGGAGCGTCTGGCGTCCGGTCGCG
CCTTCCGGCAAGGAACGACG

Downstream 100 bases:

>100_bases
GGCCGCCAGCTCCGGAGCGGCGCCCCGCTATCCGGGCTGTCCTCAGTCGTTCACGCTGAGCCGGTCGATCACGAGGCTCA
GATCCTTGCGCAGGGCGCGG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MDQATPPDARPDAPADSRLRALVGRIAAAAPLREPGADLSQLSAAPGALAAVPDAGLVTDAESGGLALVGADLSRARMEE
ADLSGANLRGASLTGAVGRSTRFTGAILEAADLSEADLSGADFTGIVAGQVKFAGAMLEDARFGEAAMRFADLSGALLDG
TDFAGADLWGADFSGADADDTVFRGARLDEAKLADANLTHADFAEASLTKASLAGSRLRGAHFTGAKLDGADLSGADLSD
TDLVRLNLATCRLRHARFAGAWLNGTRMSVEQLGGAVGEEVAGAYEAAQASYLALEQNWKSIGSHDAASWAYKRGRRMGR
FHAGQQARAAWSDRDWSGVLRHGYRWTADRFVEWLCDYGESLSRIARAFALLIVLFGGLFGLTGGLYILEGPDAGPTYNP
LDLLSYSALNMMTANPPEIGLKPTGRVTNLLVGIEGGVGIILMGLYGFVLGNRLRR

Sequences:

>Translated_456_residues
MDQATPPDARPDAPADSRLRALVGRIAAAAPLREPGADLSQLSAAPGALAAVPDAGLVTDAESGGLALVGADLSRARMEE
ADLSGANLRGASLTGAVGRSTRFTGAILEAADLSEADLSGADFTGIVAGQVKFAGAMLEDARFGEAAMRFADLSGALLDG
TDFAGADLWGADFSGADADDTVFRGARLDEAKLADANLTHADFAEASLTKASLAGSRLRGAHFTGAKLDGADLSGADLSD
TDLVRLNLATCRLRHARFAGAWLNGTRMSVEQLGGAVGEEVAGAYEAAQASYLALEQNWKSIGSHDAASWAYKRGRRMGR
FHAGQQARAAWSDRDWSGVLRHGYRWTADRFVEWLCDYGESLSRIARAFALLIVLFGGLFGLTGGLYILEGPDAGPTYNP
LDLLSYSALNMMTANPPEIGLKPTGRVTNLLVGIEGGVGIILMGLYGFVLGNRLRR
>Mature_456_residues
MDQATPPDARPDAPADSRLRALVGRIAAAAPLREPGADLSQLSAAPGALAAVPDAGLVTDAESGGLALVGADLSRARMEE
ADLSGANLRGASLTGAVGRSTRFTGAILEAADLSEADLSGADFTGIVAGQVKFAGAMLEDARFGEAAMRFADLSGALLDG
TDFAGADLWGADFSGADADDTVFRGARLDEAKLADANLTHADFAEASLTKASLAGSRLRGAHFTGAKLDGADLSGADLSD
TDLVRLNLATCRLRHARFAGAWLNGTRMSVEQLGGAVGEEVAGAYEAAQASYLALEQNWKSIGSHDAASWAYKRGRRMGR
FHAGQQARAAWSDRDWSGVLRHGYRWTADRFVEWLCDYGESLSRIARAFALLIVLFGGLFGLTGGLYILEGPDAGPTYNP
LDLLSYSALNMMTANPPEIGLKPTGRVTNLLVGIEGGVGIILMGLYGFVLGNRLRR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 47663; Mature: 47663

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQATPPDARPDAPADSRLRALVGRIAAAAPLREPGADLSQLSAAPGALAAVPDAGLVTD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCEEE
AESGGLALVGADLSRARMEEADLSGANLRGASLTGAVGRSTRFTGAILEAADLSEADLSG
CCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
ADFTGIVAGQVKFAGAMLEDARFGEAAMRFADLSGALLDGTDFAGADLWGADFSGADADD
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCH
TVFRGARLDEAKLADANLTHADFAEASLTKASLAGSRLRGAHFTGAKLDGADLSGADLSD
HHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDLVRLNLATCRLRHARFAGAWLNGTRMSVEQLGGAVGEEVAGAYEAAQASYLALEQNWK
CCEEEEEHHHHHHHHHHHHCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIGSHDAASWAYKRGRRMGRFHAGQQARAAWSDRDWSGVLRHGYRWTADRFVEWLCDYGE
HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
SLSRIARAFALLIVLFGGLFGLTGGLYILEGPDAGPTYNPLDLLSYSALNMMTANPPEIG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCCCC
LKPTGRVTNLLVGIEGGVGIILMGLYGFVLGNRLRR
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQATPPDARPDAPADSRLRALVGRIAAAAPLREPGADLSQLSAAPGALAAVPDAGLVTD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCEEE
AESGGLALVGADLSRARMEEADLSGANLRGASLTGAVGRSTRFTGAILEAADLSEADLSG
CCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
ADFTGIVAGQVKFAGAMLEDARFGEAAMRFADLSGALLDGTDFAGADLWGADFSGADADD
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCH
TVFRGARLDEAKLADANLTHADFAEASLTKASLAGSRLRGAHFTGAKLDGADLSGADLSD
HHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDLVRLNLATCRLRHARFAGAWLNGTRMSVEQLGGAVGEEVAGAYEAAQASYLALEQNWK
CCEEEEEHHHHHHHHHHHHCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIGSHDAASWAYKRGRRMGRFHAGQQARAAWSDRDWSGVLRHGYRWTADRFVEWLCDYGE
HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
SLSRIARAFALLIVLFGGLFGLTGGLYILEGPDAGPTYNPLDLLSYSALNMMTANPPEIG
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHEECCCCCCC
LKPTGRVTNLLVGIEGGVGIILMGLYGFVLGNRLRR
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA