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The map label for this gene is ydeP [H]

Identifier: 170751526

GI number: 170751526

Start: 5472040

End: 5474358

Strand: Reverse

Name: ydeP [H]

Synonym: Mrad2831_5146

Alternate gene names: 170751526

Gene position: 5474358-5472040 (Counterclockwise)

Preceding gene: 170751528

Following gene: 170751525

Centisome position: 90.07

GC content: 71.45

Gene sequence:

>2319_bases
ATGGCCGAGCAGAAGACCGACGACGTCCGGATCGAGCCCTATGACGGGCCGGCGGGCGGCTGGGGCTCGGCCCGCTCCCT
CGTCGAGATCCTGACCCGGGAGGGCGTGCCGGTCACCGGCTCGGCGATGCTGCTGAAGCAGAACAAGCCGGACGGGTACA
TGTGCACGTCCTGCGCCTGGGCGAAGCCCGCCAAGCCGCTCGCCTTCGAGTACTGCGAGAACGGCGCCAAGGCGACCGCC
TGGGAGCAGACGCGCCGCCGGGCGACGCCGGATTTCTTCGCCGCGCACACCGTGACGGAGCTCCTCGGCTGGAGCGACTA
CGCCCTGGAGGAGCAGGGCCGCCTGACCCACCCGATGCGCTACGACCCGGCGACGGACCGCTACCGGCCCGTCGCCTGGG
CGGAGGCCCTCGCGGAGATCGGCCGGGAGCTGAAGGACCTGCGCGCGCAGGATCCGCGATCGGTGGTGTTCTACGCCTCG
GGCCGGGCCTCGCTGGAGACGAGCTACATGTGGGCGCTGCTCGCCCGCCTCTACGGCAACAACAACCTGCCCGACTCCTC
CAACATGTGCCACGAGCCGACCTCGGTGGCTTTGCCGCAATCCATCGGCGCGCCGGTCGGCACGGTGCTCCTGGAGGATT
TCGAGACCACCGACCTGATCTTCTTCTTCGGCCAGAACGTCGGGTCGAACGCGCCGCGGATGCTGCACCCGCTCCAGGAG
GCGCGGCGCCGGGGCGCGCAGATCATCACCTTCAACCCGCTGCGCGAGCGCGGGCTGGAGCGCTTCACCGACCCGCAATC
GCCGGTGGAGATGCTCACCCGCTCGTCCACGAAGATCTCGACGCAGTACCACCAGGTGAAGGCCGGCGGCGACCTCGCGG
CCCTCACCGGCCTGTGCAAGGCCCTGCTCGCCCTGGACCGGGCCGCGGAGGCCGCCGGCCGGCCCCGGGTGCTCGACCAC
GCCTTCATCGCCGAGCACACCCACGGGTTCGAGGCCTTCGTCGCCTTCTGCGACGGGCAGGACTGGGCCGCGCTGGAGCG
GCGCTCCGGCCTCACCCGGACCGCGCTGGAGGCCGCAGCCGGGGTCTACGCCCGCGCGAAGGCGGTGATCGGCATCTACG
GGATGGGCCTGACCCAGCACCGCAAGGGCACCGAGACCGTCCGGATGCTCGTGAACCTGCTGCTCCTGCGCGGCAATATC
GGGAAGCCCGGCGCCGGGATCTGCCCGGTGCGGGGCCACTCGAACGTGCAGGGCCAGCGCACCGTCGGCATCACCGAGAA
GCCCGAGCTGGCGCCGCTGGACAAGCTGCGGGAGCTCTACGGCTTCGAGCCGCCGCGGGAGAAGGGCCTCAACACCGTCG
AGACCTGCGAGGGCGTCCTCGACGGGCGCGTGAAGGCCTTCGTCGGGCTCGGCGGCAACTTCCTGCGCGCCGTGCCCGAC
ACCGCCCGGATGGAGCCGGCCTGGCGGCGGCAGCGCCTCACCGTGCAGATCTCGACCAAGCTCAACCGCTCGCACCTCGT
CAACGGCGCCGTCGCCTACATCCTGCCCTGCCTCGGCCGGATCGAGATCGACGAGCAGGCGAGCGGCCGGCAGGCGGTGT
CGATGGAGGATTCCACCGCGCGCTTCCACGGTTCCCGGGGCGTGGCCGAACCGGTCGGGCCGCACCTGCGCTCCGAGCCC
TGGATCGTGGCGGAGATCGCCAAGGCGACGCTGCCGCCCAATCCCCGGATCGACTGGGATGCCTGGGTGGCCGATTACGG
GCGGGTGCGCGACGCGATCGAGGCGACCTACCCGAGCGTGTTCCACGACCTGAACGGCCGGATGTTCCAGCCCGGCGGCC
TGACGAAGCCGCTCGGCGCCCGCGACCGCAAATGGGAGACCGAGACCGGGAAGGCGAATTTCGCGGTGCCCGAGGGACTC
GAGGCCGACCCGGACCTGCCCGAGCGCGGCCCGGACGTGCTCGACCTGATCACGCTGCGGTCGAACGACCAGTTCAACAC
CACGGTCTACGGCTACGACGACCGTTTCCGCGGGGTGAAGGGCACCCGGGACGTGCTGTTCATGAACCGGCGCGACATCG
CGCGGCTGGGGCTGAGGGACGGGATCAGCGTCGACGTGGCGACCGAGGCGGACGACCATGTGCCGCGGCGCGTGGGCGGC
CTGCGGGTGATCGCCTACGACATCCCGGAGGGCAACTGCGCCGGGTACTACCCGGAGTTGAACGTCCTGCTGCCGCTCTG
GCACCACGACGAGCAGTCCAAGACCCCCGCCGCCAAGGCGATCACCGTGCGGGTGACGGCCGCGACCGCCGCGCCCTGA

Upstream 100 bases:

>100_bases
GAGGAAACCCTTCCCCGGGCGCGGTGACGCGCCCGTGATCCCATTCGCCCGCTCGCGCGTTCCCCCGGTCCGGTGATCGC
TGCGCCGGGTGGAGGGCGCC

Downstream 100 bases:

>100_bases
GCGGAGCGTCTGGCGTCCGGTCGCGCCTTCCGGCAAGGAACGACGATGGACCAGGCGACTCCCCCCGACGCGCGACCGGA
CGCCCCGGCGGACTCGCGGC

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 772; Mature: 771

Protein sequence:

>772_residues
MAEQKTDDVRIEPYDGPAGGWGSARSLVEILTREGVPVTGSAMLLKQNKPDGYMCTSCAWAKPAKPLAFEYCENGAKATA
WEQTRRRATPDFFAAHTVTELLGWSDYALEEQGRLTHPMRYDPATDRYRPVAWAEALAEIGRELKDLRAQDPRSVVFYAS
GRASLETSYMWALLARLYGNNNLPDSSNMCHEPTSVALPQSIGAPVGTVLLEDFETTDLIFFFGQNVGSNAPRMLHPLQE
ARRRGAQIITFNPLRERGLERFTDPQSPVEMLTRSSTKISTQYHQVKAGGDLAALTGLCKALLALDRAAEAAGRPRVLDH
AFIAEHTHGFEAFVAFCDGQDWAALERRSGLTRTALEAAAGVYARAKAVIGIYGMGLTQHRKGTETVRMLVNLLLLRGNI
GKPGAGICPVRGHSNVQGQRTVGITEKPELAPLDKLRELYGFEPPREKGLNTVETCEGVLDGRVKAFVGLGGNFLRAVPD
TARMEPAWRRQRLTVQISTKLNRSHLVNGAVAYILPCLGRIEIDEQASGRQAVSMEDSTARFHGSRGVAEPVGPHLRSEP
WIVAEIAKATLPPNPRIDWDAWVADYGRVRDAIEATYPSVFHDLNGRMFQPGGLTKPLGARDRKWETETGKANFAVPEGL
EADPDLPERGPDVLDLITLRSNDQFNTTVYGYDDRFRGVKGTRDVLFMNRRDIARLGLRDGISVDVATEADDHVPRRVGG
LRVIAYDIPEGNCAGYYPELNVLLPLWHHDEQSKTPAAKAITVRVTAATAAP

Sequences:

>Translated_772_residues
MAEQKTDDVRIEPYDGPAGGWGSARSLVEILTREGVPVTGSAMLLKQNKPDGYMCTSCAWAKPAKPLAFEYCENGAKATA
WEQTRRRATPDFFAAHTVTELLGWSDYALEEQGRLTHPMRYDPATDRYRPVAWAEALAEIGRELKDLRAQDPRSVVFYAS
GRASLETSYMWALLARLYGNNNLPDSSNMCHEPTSVALPQSIGAPVGTVLLEDFETTDLIFFFGQNVGSNAPRMLHPLQE
ARRRGAQIITFNPLRERGLERFTDPQSPVEMLTRSSTKISTQYHQVKAGGDLAALTGLCKALLALDRAAEAAGRPRVLDH
AFIAEHTHGFEAFVAFCDGQDWAALERRSGLTRTALEAAAGVYARAKAVIGIYGMGLTQHRKGTETVRMLVNLLLLRGNI
GKPGAGICPVRGHSNVQGQRTVGITEKPELAPLDKLRELYGFEPPREKGLNTVETCEGVLDGRVKAFVGLGGNFLRAVPD
TARMEPAWRRQRLTVQISTKLNRSHLVNGAVAYILPCLGRIEIDEQASGRQAVSMEDSTARFHGSRGVAEPVGPHLRSEP
WIVAEIAKATLPPNPRIDWDAWVADYGRVRDAIEATYPSVFHDLNGRMFQPGGLTKPLGARDRKWETETGKANFAVPEGL
EADPDLPERGPDVLDLITLRSNDQFNTTVYGYDDRFRGVKGTRDVLFMNRRDIARLGLRDGISVDVATEADDHVPRRVGG
LRVIAYDIPEGNCAGYYPELNVLLPLWHHDEQSKTPAAKAITVRVTAATAAP
>Mature_771_residues
AEQKTDDVRIEPYDGPAGGWGSARSLVEILTREGVPVTGSAMLLKQNKPDGYMCTSCAWAKPAKPLAFEYCENGAKATAW
EQTRRRATPDFFAAHTVTELLGWSDYALEEQGRLTHPMRYDPATDRYRPVAWAEALAEIGRELKDLRAQDPRSVVFYASG
RASLETSYMWALLARLYGNNNLPDSSNMCHEPTSVALPQSIGAPVGTVLLEDFETTDLIFFFGQNVGSNAPRMLHPLQEA
RRRGAQIITFNPLRERGLERFTDPQSPVEMLTRSSTKISTQYHQVKAGGDLAALTGLCKALLALDRAAEAAGRPRVLDHA
FIAEHTHGFEAFVAFCDGQDWAALERRSGLTRTALEAAAGVYARAKAVIGIYGMGLTQHRKGTETVRMLVNLLLLRGNIG
KPGAGICPVRGHSNVQGQRTVGITEKPELAPLDKLRELYGFEPPREKGLNTVETCEGVLDGRVKAFVGLGGNFLRAVPDT
ARMEPAWRRQRLTVQISTKLNRSHLVNGAVAYILPCLGRIEIDEQASGRQAVSMEDSTARFHGSRGVAEPVGPHLRSEPW
IVAEIAKATLPPNPRIDWDAWVADYGRVRDAIEATYPSVFHDLNGRMFQPGGLTKPLGARDRKWETETGKANFAVPEGLE
ADPDLPERGPDVLDLITLRSNDQFNTTVYGYDDRFRGVKGTRDVLFMNRRDIARLGLRDGISVDVATEADDHVPRRVGGL
RVIAYDIPEGNCAGYYPELNVLLPLWHHDEQSKTPAAKAITVRVTAATAAP

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=758, Percent_Identity=46.7018469656992, Blast_Score=684, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=396, Percent_Identity=28.030303030303, Blast_Score=149, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84934; Mature: 84803

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQKTDDVRIEPYDGPAGGWGSARSLVEILTREGVPVTGSAMLLKQNKPDGYMCTSCAW
CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCC
AKPAKPLAFEYCENGAKATAWEQTRRRATPDFFAAHTVTELLGWSDYALEEQGRLTHPMR
CCCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YDPATDRYRPVAWAEALAEIGRELKDLRAQDPRSVVFYASGRASLETSYMWALLARLYGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
NNLPDSSNMCHEPTSVALPQSIGAPVGTVLLEDFETTDLIFFFGQNVGSNAPRMLHPLQE
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
ARRRGAQIITFNPLRERGLERFTDPQSPVEMLTRSSTKISTQYHQVKAGGDLAALTGLCK
HHHCCCEEEEECHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHH
ALLALDRAAEAAGRPRVLDHAFIAEHTHGFEAFVAFCDGQDWAALERRSGLTRTALEAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH
GVYARAKAVIGIYGMGLTQHRKGTETVRMLVNLLLLRGNIGKPGAGICPVRGHSNVQGQR
HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
TVGITEKPELAPLDKLRELYGFEPPREKGLNTVETCEGVLDGRVKAFVGLGGNFLRAVPD
EECCCCCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCC
TARMEPAWRRQRLTVQISTKLNRSHLVNGAVAYILPCLGRIEIDEQASGRQAVSMEDSTA
HHCCCHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHH
RFHGSRGVAEPVGPHLRSEPWIVAEIAKATLPPNPRIDWDAWVADYGRVRDAIEATYPSV
HHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FHDLNGRMFQPGGLTKPLGARDRKWETETGKANFAVPEGLEADPDLPERGPDVLDLITLR
HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
SNDQFNTTVYGYDDRFRGVKGTRDVLFMNRRDIARLGLRDGISVDVATEADDHVPRRVGG
CCCCCCCEEECCCHHHCCCCCCCCEEEECCHHHHHHCCCCCCEEEEECCCCCCCHHHHCC
LRVIAYDIPEGNCAGYYPELNVLLPLWHHDEQSKTPAAKAITVRVTAATAAP
EEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
AEQKTDDVRIEPYDGPAGGWGSARSLVEILTREGVPVTGSAMLLKQNKPDGYMCTSCAW
CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCC
AKPAKPLAFEYCENGAKATAWEQTRRRATPDFFAAHTVTELLGWSDYALEEQGRLTHPMR
CCCCCCHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YDPATDRYRPVAWAEALAEIGRELKDLRAQDPRSVVFYASGRASLETSYMWALLARLYGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
NNLPDSSNMCHEPTSVALPQSIGAPVGTVLLEDFETTDLIFFFGQNVGSNAPRMLHPLQE
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH
ARRRGAQIITFNPLRERGLERFTDPQSPVEMLTRSSTKISTQYHQVKAGGDLAALTGLCK
HHHCCCEEEEECHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHEEECCCCHHHHHHHHH
ALLALDRAAEAAGRPRVLDHAFIAEHTHGFEAFVAFCDGQDWAALERRSGLTRTALEAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH
GVYARAKAVIGIYGMGLTQHRKGTETVRMLVNLLLLRGNIGKPGAGICPVRGHSNVQGQR
HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
TVGITEKPELAPLDKLRELYGFEPPREKGLNTVETCEGVLDGRVKAFVGLGGNFLRAVPD
EECCCCCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCC
TARMEPAWRRQRLTVQISTKLNRSHLVNGAVAYILPCLGRIEIDEQASGRQAVSMEDSTA
HHCCCHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHH
RFHGSRGVAEPVGPHLRSEPWIVAEIAKATLPPNPRIDWDAWVADYGRVRDAIEATYPSV
HHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FHDLNGRMFQPGGLTKPLGARDRKWETETGKANFAVPEGLEADPDLPERGPDVLDLITLR
HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
SNDQFNTTVYGYDDRFRGVKGTRDVLFMNRRDIARLGLRDGISVDVATEADDHVPRRVGG
CCCCCCCEEECCCHHHCCCCCCCCEEEECCHHHHHHCCCCCCEEEEECCCCCCCHHHHCC
LRVIAYDIPEGNCAGYYPELNVLLPLWHHDEQSKTPAAKAITVRVTAATAAP
EEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]