Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is phbA [H]
Identifier: 170751498
GI number: 170751498
Start: 5440748
End: 5441932
Strand: Direct
Name: phbA [H]
Synonym: Mrad2831_5118
Alternate gene names: 170751498
Gene position: 5440748-5441932 (Clockwise)
Preceding gene: 170751495
Following gene: 170751499
Centisome position: 89.52
GC content: 70.72
Gene sequence:
>1185_bases ATGGCAGGCAGCGAAGAGATCGTCATCGTCGGGGCGGCGCGCACGCCGGTCGGCTCGTTCGGCGGCGCCTTCGGGGCGGT GCCGGCCCACGAGCTCGGCGCGACGGCGATCAAGGCCGCCCTGGAGCGGGCCAAGGTCTCGCCCGATGAGGTGGACGAGG TGATCTTCGGGCAGGTCCTCACCGCGGGCGCCGGCCAGAACCCCGCCCGGCAGGCCGCCATCAAGGCCGGCATCCCCGAG AAGGCCACCGCATGGGGCCTCAACCAGGTCTGCGGCTCGGGTCTGCGCACGGTCGCGATCGGCATGCAGCAGATCGCCAA TGGCGACGCCAAGGTCATCGTGGCCGGCGGTCAGGAATCGATGTCCCTGTCGCCCCACGCGCAGTACCTGCGCGGCGGCC AGAAGATGGGCGACGTGAAGCTCGTCGACACCATGATCAAGGACGGGCTCTGGGACGCCTTCAACGGCTACCACATGGGT CAGACCGCCGAGAACGTCGCCCAGGCCTTCCAGCTCACCCGCGAGCAGCAGGACCAGTTCGCGACCCGCTCGCAGAACAA GGCCGAGGCCGCCCGCAAGGAGGGCCGGTTCAAGGACGAGATCGTCCCCGTCACCGTGCCGGGCAAGAAGGGCGACACGG TCGTCGACACCGACGAGTACATCCGCGACGGCGCCACCATCGAGGCGATGGCCAAGCTGAAGCCGGCCTTCACCAAGGAC GGCACCGTCACGGCCGCCAACGCCTCGGGCCTCAACGACGGCGCCGCCGCCCTGGTGCTGATGTCGGCCTCGGAGGCCGA GCGCCGCGGCCTGACCCCGCTCGCCCGGATCAAGTCCTGGGCGACCGCCGGCGTCGATCCGAAGGTCATGGGCACCGGCC CGATCCCGGCCTCCCGCAAGGCCCTGGAGAAGGCCGGCTGGAAGCCGTCCGACCTCGACCTGATCGAGGCCAACGAGGCC TTCGCGGCCCAGGCGCTGGCCGTGAACAAGGACATGGGCTGGGACGACGCGAAGGTGAACGTCAACGGCGGCGCCATCGC CATCGGTCACCCGATCGGCGCCTCGGGCGCCCGCGTGCTCGTCACCCTGCTGCACGAGATGAAGCGCCGCGACGCCAAGA AGGGCCTCGCCACGCTCTGCATCGGCGGTGGCATGGGCGTGGCGATGTGCGTCGAGCGGACCTGA
Upstream 100 bases:
>100_bases AACCTTGACTTCGCCGACCTCAAGCCCTTCATCCCAGAGCCGGCACAGAGCGCGCCCCGGGACGTGGAGGCGCGCCGGCT CGCGAGAGGAGAACGTTCAC
Downstream 100 bases:
>100_bases TCGGTCTGTCACGACAGTATCGGCTCACAACATAGACTTAAGGCCGAAGTCAGAAAAAATCGCGTGCGGACGCCATCCGC ACGCGGCATCAAGTGATGCG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MAGSEEIVIVGAARTPVGSFGGAFGAVPAHELGATAIKAALERAKVSPDEVDEVIFGQVLTAGAGQNPARQAAIKAGIPE KATAWGLNQVCGSGLRTVAIGMQQIANGDAKVIVAGGQESMSLSPHAQYLRGGQKMGDVKLVDTMIKDGLWDAFNGYHMG QTAENVAQAFQLTREQQDQFATRSQNKAEAARKEGRFKDEIVPVTVPGKKGDTVVDTDEYIRDGATIEAMAKLKPAFTKD GTVTAANASGLNDGAAALVLMSASEAERRGLTPLARIKSWATAGVDPKVMGTGPIPASRKALEKAGWKPSDLDLIEANEA FAAQALAVNKDMGWDDAKVNVNGGAIAIGHPIGASGARVLVTLLHEMKRRDAKKGLATLCIGGGMGVAMCVERT
Sequences:
>Translated_394_residues MAGSEEIVIVGAARTPVGSFGGAFGAVPAHELGATAIKAALERAKVSPDEVDEVIFGQVLTAGAGQNPARQAAIKAGIPE KATAWGLNQVCGSGLRTVAIGMQQIANGDAKVIVAGGQESMSLSPHAQYLRGGQKMGDVKLVDTMIKDGLWDAFNGYHMG QTAENVAQAFQLTREQQDQFATRSQNKAEAARKEGRFKDEIVPVTVPGKKGDTVVDTDEYIRDGATIEAMAKLKPAFTKD GTVTAANASGLNDGAAALVLMSASEAERRGLTPLARIKSWATAGVDPKVMGTGPIPASRKALEKAGWKPSDLDLIEANEA FAAQALAVNKDMGWDDAKVNVNGGAIAIGHPIGASGARVLVTLLHEMKRRDAKKGLATLCIGGGMGVAMCVERT >Mature_393_residues AGSEEIVIVGAARTPVGSFGGAFGAVPAHELGATAIKAALERAKVSPDEVDEVIFGQVLTAGAGQNPARQAAIKAGIPEK ATAWGLNQVCGSGLRTVAIGMQQIANGDAKVIVAGGQESMSLSPHAQYLRGGQKMGDVKLVDTMIKDGLWDAFNGYHMGQ TAENVAQAFQLTREQQDQFATRSQNKAEAARKEGRFKDEIVPVTVPGKKGDTVVDTDEYIRDGATIEAMAKLKPAFTKDG TVTAANASGLNDGAAALVLMSASEAERRGLTPLARIKSWATAGVDPKVMGTGPIPASRKALEKAGWKPSDLDLIEANEAF AAQALAVNKDMGWDDAKVNVNGGAIAIGHPIGASGARVLVTLLHEMKRRDAKKGLATLCIGGGMGVAMCVERT
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=394, Percent_Identity=57.8680203045685, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI167614485, Length=400, Percent_Identity=43, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI4557237, Length=392, Percent_Identity=45.1530612244898, Blast_Score=317, Evalue=1e-86, Organism=Homo sapiens, GI4501853, Length=398, Percent_Identity=41.4572864321608, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI4504327, Length=424, Percent_Identity=35.377358490566, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI194353979, Length=394, Percent_Identity=30.7106598984772, Blast_Score=147, Evalue=1e-35, Organism=Escherichia coli, GI87082165, Length=390, Percent_Identity=55.6410256410256, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI1788554, Length=394, Percent_Identity=58.1218274111675, Blast_Score=435, Evalue=1e-123, Organism=Escherichia coli, GI1787663, Length=399, Percent_Identity=43.3583959899749, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI48994986, Length=402, Percent_Identity=42.7860696517413, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1788683, Length=424, Percent_Identity=34.9056603773585, Blast_Score=220, Evalue=1e-58, Organism=Caenorhabditis elegans, GI133906874, Length=396, Percent_Identity=44.1919191919192, Blast_Score=335, Evalue=2e-92, Organism=Caenorhabditis elegans, GI25147385, Length=386, Percent_Identity=43.5233160621762, Blast_Score=301, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17535921, Length=393, Percent_Identity=38.9312977099237, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI17551802, Length=423, Percent_Identity=35.6973995271868, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17535917, Length=392, Percent_Identity=33.6734693877551, Blast_Score=189, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6325229, Length=401, Percent_Identity=44.6384039900249, Blast_Score=300, Evalue=3e-82, Organism=Saccharomyces cerevisiae, GI6322031, Length=390, Percent_Identity=37.6923076923077, Blast_Score=227, Evalue=2e-60, Organism=Drosophila melanogaster, GI24655093, Length=388, Percent_Identity=56.9587628865979, Blast_Score=463, Evalue=1e-130, Organism=Drosophila melanogaster, GI24640423, Length=392, Percent_Identity=45.4081632653061, Blast_Score=318, Evalue=4e-87, Organism=Drosophila melanogaster, GI17648125, Length=396, Percent_Identity=42.1717171717172, Blast_Score=291, Evalue=7e-79, Organism=Drosophila melanogaster, GI17137578, Length=430, Percent_Identity=34.8837209302326, Blast_Score=216, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40911; Mature: 40780
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSEEIVIVGAARTPVGSFGGAFGAVPAHELGATAIKAALERAKVSPDEVDEVIFGQVL CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TAGAGQNPARQAAIKAGIPEKATAWGLNQVCGSGLRTVAIGMQQIANGDAKVIVAGGQES HCCCCCCHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCC MSLSPHAQYLRGGQKMGDVKLVDTMIKDGLWDAFNGYHMGQTAENVAQAFQLTREQQDQF CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ATRSQNKAEAARKEGRFKDEIVPVTVPGKKGDTVVDTDEYIRDGATIEAMAKLKPAFTKD HHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHCCCHHHHHHHHCCCCCCC GTVTAANASGLNDGAAALVLMSASEAERRGLTPLARIKSWATAGVDPKVMGTGPIPASRK CEEEECCCCCCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHH ALEKAGWKPSDLDLIEANEAFAAQALAVNKDMGWDDAKVNVNGGAIAIGHPIGASGARVL HHHHCCCCCCCCCEEECCHHHHHHHHEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHH VTLLHEMKRRDAKKGLATLCIGGGMGVAMCVERT HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECC >Mature Secondary Structure AGSEEIVIVGAARTPVGSFGGAFGAVPAHELGATAIKAALERAKVSPDEVDEVIFGQVL CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TAGAGQNPARQAAIKAGIPEKATAWGLNQVCGSGLRTVAIGMQQIANGDAKVIVAGGQES HCCCCCCHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCC MSLSPHAQYLRGGQKMGDVKLVDTMIKDGLWDAFNGYHMGQTAENVAQAFQLTREQQDQF CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ATRSQNKAEAARKEGRFKDEIVPVTVPGKKGDTVVDTDEYIRDGATIEAMAKLKPAFTKD HHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCHHHHHCCCHHHHHHHHCCCCCCC GTVTAANASGLNDGAAALVLMSASEAERRGLTPLARIKSWATAGVDPKVMGTGPIPASRK CEEEECCCCCCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHH ALEKAGWKPSDLDLIEANEAFAAQALAVNKDMGWDDAKVNVNGGAIAIGHPIGASGARVL HHHHCCCCCCCCCEEECCHHHHHHHHEECCCCCCCCCEEEECCCEEEECCCCCCCHHHHH VTLLHEMKRRDAKKGLATLCIGGGMGVAMCVERT HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2878929; 2670935; 1673680; 10764581; 10545327; 12501183 [H]