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The map label for this gene is phaC [H]

Identifier: 170751452

GI number: 170751452

Start: 5387918

End: 5389759

Strand: Reverse

Name: phaC [H]

Synonym: Mrad2831_5071

Alternate gene names: 170751452

Gene position: 5389759-5387918 (Counterclockwise)

Preceding gene: 170751457

Following gene: 170751450

Centisome position: 88.68

GC content: 68.51

Gene sequence:

>1842_bases
TTGACGAGCCCGCAGGCGCCGGATCGGACCGCCCCTCCGAAGTCGGTCTCGAACGGCGCGATGCCGGACGGCACGGTCGC
CCCGATGCCGGATTTCGAGGCGCTCTCCCGAAATGCCGGGCAGTTCGTCGAGGCGATGGGGCGCAACGTCGCCCGCCTCC
TCGGGCCCGAGGGCCAAGCGGGCGCGCCCGGCAGCGAGATGAACGAGGCGGCCAAGGTGCTCGGTCAGGTGGCCGAGGCC
TGGCTCGCCGACCCGAACCGCAGCGCCGAGGCGCAGGCCCGCCTGGCGCAGGCCTTCCTGTCGCTCTGGGGCTCCACCTA
CCTGCGCCTGCAGGGCCAGCCCGCCGATCCGGTGGCGCTGCCCGAGCCCCGGGACGCGCGATTCGCCCATGCCGAGTGGT
CGACCAACCCGTATTTCGATTTCATCAAGCAGGCCTACCTGCTCGCAACCCGCTGGGCCGAGAGCCTCGTGGACGAGGCC
GAGGGTCTCGACGCGCATACCCGCCACAAGGCGCAGTTCTACCTGCGCCAGCTCACCAGCATGCTGTCGCCCTCGAACTT
CCTGCCGACCAACCCGGAGCTGATCCGCCACACCCTGCAGGAGAACGGCGCCAACCTCGTCCGCGGCCTCAAGATGTACG
AGGAGGATCTGCAGGCCGGCGGCGGGCAGCTGCGGGTACGCCAGACCGACCCGAGCGGGTTCGAGGTCGGCCGCAACATG
GCGGTCACCCCCGGCGAGGTGGTGTTCCGCAACGACCTGATCGAGCTGATCCAGTACGCGCCGACCACCGAGACCGTGCT
GCGGCGCCCGTTCCTGATGGTCCCGCCCTGGATCAACAAGTTCTACATCCTCGACCTCAACCCCCAGAAGAGCTTCTTCA
AGTGGATGGTCGATCAGGGGCTGACGGTCTTCTGCATCTCCTGGGTGAACCCGGATACGCGCCACGCCGACAAGGACTTC
GAGTCCTACATGCGCGAGGGGATCGAGGCGGCCATCGACGCGATCGGCGTCGCCACCGGCGAGAACGAGGTCACGGCGGC
GGGCTACTGCGTCGGCGGCACGCTGCTCGCCGTGACGCTCGCCATGCAGGCCGCGACCGGCAACCGCCGGATCAAGAGCG
CGACGCTGCTCACCACGCAGGTCGACTTCACCCACGCGGGCGACCTGAAGGTCTTCGCCGACGAGGAGCAGATCCGCCAG
GTCGAGGCGCGCATGGCCGAGCAGGGCTATCTCGAGGGCGCCCGGATGGCGAACGCCTTCAACATGCTCCGGCCGAACGA
CCTGATCTGGCCCTATGTCGTGAACAACTACATCAAGGGTAAGGCGCCCTCGGCCTTCGACCTGCTGTACTGGAATTCCG
ACGCCACCCGGATGCCGGCGGCCAACCATTCCTTCTACCTGCGCAACTGCTACCTCAACAACACGCTGGCGCAGGGCCGA
ATGGTGCTGGGCAACGTCCGCCTCGACCTCCGGAAGGTGCAGGTTCCGATCTTCAACCTCGCCACCCGCGAGGACCACAT
CGCGCCGGCGCTGTCGGTCTTCGAGGGCTCGAAGGTGTTCGGCGGCAAGGTCGATTTCGTGCTCGCGGGCTCGGGCCACA
TCGCCGGCGTGATCAACCCGCCGTCCAAGCCGAAATACGGCTACTGGACCGGCGGCCCCGTGAAGGGGACGCTCGAAGAG
TGGATCAGGGCCGCGGTCGAGACCAAGGGCTCGTGGTGGCCCTACTGGTTCCAGTGGATCGAGGCGCAGGCTCCGGAGCG
GGTGCCCGCCCGTCAGCCGGGCGGCGACGCTCTTCAATCCCTGGGCCCCGCGCCCGGGACCTACGTGCGGATGCGCGCCT
GA

Upstream 100 bases:

>100_bases
CGTCCTGAGCCGGGCTGGCGAAAACTCTGGCTCGCTCCTTATTTTGTCGGAAACGAGGCCCGCGCCATCGGGTCAACAGA
TGAAGCACAGGGAGGCACGT

Downstream 100 bases:

>100_bases
GGCGCGCGGCGCGCGCGGGTCGACGGGTGATCGGCCGCGACGATCACGGAGCCGCCCCGCCATCACGAGCGGAGCGACGT
CACCCAGGGCAGCGCGACAC

Product: poly(R)-hydroxyalkanoic acid synthase, class I

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MTSPQAPDRTAPPKSVSNGAMPDGTVAPMPDFEALSRNAGQFVEAMGRNVARLLGPEGQAGAPGSEMNEAAKVLGQVAEA
WLADPNRSAEAQARLAQAFLSLWGSTYLRLQGQPADPVALPEPRDARFAHAEWSTNPYFDFIKQAYLLATRWAESLVDEA
EGLDAHTRHKAQFYLRQLTSMLSPSNFLPTNPELIRHTLQENGANLVRGLKMYEEDLQAGGGQLRVRQTDPSGFEVGRNM
AVTPGEVVFRNDLIELIQYAPTTETVLRRPFLMVPPWINKFYILDLNPQKSFFKWMVDQGLTVFCISWVNPDTRHADKDF
ESYMREGIEAAIDAIGVATGENEVTAAGYCVGGTLLAVTLAMQAATGNRRIKSATLLTTQVDFTHAGDLKVFADEEQIRQ
VEARMAEQGYLEGARMANAFNMLRPNDLIWPYVVNNYIKGKAPSAFDLLYWNSDATRMPAANHSFYLRNCYLNNTLAQGR
MVLGNVRLDLRKVQVPIFNLATREDHIAPALSVFEGSKVFGGKVDFVLAGSGHIAGVINPPSKPKYGYWTGGPVKGTLEE
WIRAAVETKGSWWPYWFQWIEAQAPERVPARQPGGDALQSLGPAPGTYVRMRA

Sequences:

>Translated_613_residues
MTSPQAPDRTAPPKSVSNGAMPDGTVAPMPDFEALSRNAGQFVEAMGRNVARLLGPEGQAGAPGSEMNEAAKVLGQVAEA
WLADPNRSAEAQARLAQAFLSLWGSTYLRLQGQPADPVALPEPRDARFAHAEWSTNPYFDFIKQAYLLATRWAESLVDEA
EGLDAHTRHKAQFYLRQLTSMLSPSNFLPTNPELIRHTLQENGANLVRGLKMYEEDLQAGGGQLRVRQTDPSGFEVGRNM
AVTPGEVVFRNDLIELIQYAPTTETVLRRPFLMVPPWINKFYILDLNPQKSFFKWMVDQGLTVFCISWVNPDTRHADKDF
ESYMREGIEAAIDAIGVATGENEVTAAGYCVGGTLLAVTLAMQAATGNRRIKSATLLTTQVDFTHAGDLKVFADEEQIRQ
VEARMAEQGYLEGARMANAFNMLRPNDLIWPYVVNNYIKGKAPSAFDLLYWNSDATRMPAANHSFYLRNCYLNNTLAQGR
MVLGNVRLDLRKVQVPIFNLATREDHIAPALSVFEGSKVFGGKVDFVLAGSGHIAGVINPPSKPKYGYWTGGPVKGTLEE
WIRAAVETKGSWWPYWFQWIEAQAPERVPARQPGGDALQSLGPAPGTYVRMRA
>Mature_612_residues
TSPQAPDRTAPPKSVSNGAMPDGTVAPMPDFEALSRNAGQFVEAMGRNVARLLGPEGQAGAPGSEMNEAAKVLGQVAEAW
LADPNRSAEAQARLAQAFLSLWGSTYLRLQGQPADPVALPEPRDARFAHAEWSTNPYFDFIKQAYLLATRWAESLVDEAE
GLDAHTRHKAQFYLRQLTSMLSPSNFLPTNPELIRHTLQENGANLVRGLKMYEEDLQAGGGQLRVRQTDPSGFEVGRNMA
VTPGEVVFRNDLIELIQYAPTTETVLRRPFLMVPPWINKFYILDLNPQKSFFKWMVDQGLTVFCISWVNPDTRHADKDFE
SYMREGIEAAIDAIGVATGENEVTAAGYCVGGTLLAVTLAMQAATGNRRIKSATLLTTQVDFTHAGDLKVFADEEQIRQV
EARMAEQGYLEGARMANAFNMLRPNDLIWPYVVNNYIKGKAPSAFDLLYWNSDATRMPAANHSFYLRNCYLNNTLAQGRM
VLGNVRLDLRKVQVPIFNLATREDHIAPALSVFEGSKVFGGKVDFVLAGSGHIAGVINPPSKPKYGYWTGGPVKGTLEEW
IRAAVETKGSWWPYWFQWIEAQAPERVPARQPGGDALQSLGPAPGTYVRMRA

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 67740; Mature: 67608

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPQAPDRTAPPKSVSNGAMPDGTVAPMPDFEALSRNAGQFVEAMGRNVARLLGPEGQA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
GAPGSEMNEAAKVLGQVAEAWLADPNRSAEAQARLAQAFLSLWGSTYLRLQGQPADPVAL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
PEPRDARFAHAEWSTNPYFDFIKQAYLLATRWAESLVDEAEGLDAHTRHKAQFYLRQLTS
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MLSPSNFLPTNPELIRHTLQENGANLVRGLKMYEEDLQAGGGQLRVRQTDPSGFEVGRNM
HHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCC
AVTPGEVVFRNDLIELIQYAPTTETVLRRPFLMVPPWINKFYILDLNPQKSFFKWMVDQG
CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCEEEEEEECCHHHHHHHHHHCC
LTVFCISWVNPDTRHADKDFESYMREGIEAAIDAIGVATGENEVTAAGYCVGGTLLAVTL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEECEEHHHHHHHHHHH
AMQAATGNRRIKSATLLTTQVDFTHAGDLKVFADEEQIRQVEARMAEQGYLEGARMANAF
HHHHCCCCCEEEEEEEEEEEECCEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
NMLRPNDLIWPYVVNNYIKGKAPSAFDLLYWNSDATRMPAANHSFYLRNCYLNNTLAQGR
HCCCCCCCCCHHHHCCHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCHHHCCC
MVLGNVRLDLRKVQVPIFNLATREDHIAPALSVFEGSKVFGGKVDFVLAGSGHIAGVINP
EEEEECEEEEEEEECCCEEECCCCHHHHHHHHHHCCCCEECCEEEEEEECCCCEEEEECC
PSKPKYGYWTGGPVKGTLEEWIRAAVETKGSWWPYWFQWIEAQAPERVPARQPGGDALQS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
LGPAPGTYVRMRA
CCCCCCCEEEEEC
>Mature Secondary Structure 
TSPQAPDRTAPPKSVSNGAMPDGTVAPMPDFEALSRNAGQFVEAMGRNVARLLGPEGQA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
GAPGSEMNEAAKVLGQVAEAWLADPNRSAEAQARLAQAFLSLWGSTYLRLQGQPADPVAL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
PEPRDARFAHAEWSTNPYFDFIKQAYLLATRWAESLVDEAEGLDAHTRHKAQFYLRQLTS
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MLSPSNFLPTNPELIRHTLQENGANLVRGLKMYEEDLQAGGGQLRVRQTDPSGFEVGRNM
HHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCC
AVTPGEVVFRNDLIELIQYAPTTETVLRRPFLMVPPWINKFYILDLNPQKSFFKWMVDQG
CCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCEEEEEEECCHHHHHHHHHHCC
LTVFCISWVNPDTRHADKDFESYMREGIEAAIDAIGVATGENEVTAAGYCVGGTLLAVTL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEECEEHHHHHHHHHHH
AMQAATGNRRIKSATLLTTQVDFTHAGDLKVFADEEQIRQVEARMAEQGYLEGARMANAF
HHHHCCCCCEEEEEEEEEEEECCEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
NMLRPNDLIWPYVVNNYIKGKAPSAFDLLYWNSDATRMPAANHSFYLRNCYLNNTLAQGR
HCCCCCCCCCHHHHCCHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCHHHCCC
MVLGNVRLDLRKVQVPIFNLATREDHIAPALSVFEGSKVFGGKVDFVLAGSGHIAGVINP
EEEEECEEEEEEEECCCEEECCCCHHHHHHHHHHCCCCEECCEEEEEEECCCCEEEEECC
PSKPKYGYWTGGPVKGTLEEWIRAAVETKGSWWPYWFQWIEAQAPERVPARQPGGDALQS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
LGPAPGTYVRMRA
CCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]