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The map label for this gene is ydiU [C]

Identifier: 170751275

GI number: 170751275

Start: 5221485

End: 5222960

Strand: Reverse

Name: ydiU [C]

Synonym: Mrad2831_4892

Alternate gene names: 170751275

Gene position: 5222960-5221485 (Counterclockwise)

Preceding gene: 170751276

Following gene: 170751273

Centisome position: 85.93

GC content: 75.88

Gene sequence:

>1476_bases
ATGACGGCACTCCCCTTCGACAACAGCTACGCCCGCCTGCCGGAGCGCTTCTACGCGCGCCGGCCGCCGACGCCGGTGGC
GGCGCCGCGCCTCGTCCGGCTCAACCGCCCGCTCGCCGAGGAGCTCGGCCTCGACCCGGACTGGCTCGCCGGCCCGGACG
GCGTCGCGGCGCTCGCGGGCAACACCGTCCCGGACGGCGCCGACCCGATCGCCGCGGCCTATGCCGGGCATCAGTTCGGC
CAGTTCGTGCCGCAGCTCGGCGACGGCCGCGCGGTCCTCCTCGGCGAGGTCGTCGACCGCAACGGGCACCGCCGCGACAT
CCAGCTGAAGGGCGCGGGCCCGACGCCGTTCTCCCGGCGAGGCGACGGGCGGGCGGCGCTCGGCCCGGTCCTGCGCGAGT
ACCTCGTCAGCGAGGCCATGGCGGCGCTCGGCATCCCGACCACCCGGGCCCTCGCCGCCGTGACGACCGGCGAGCGGGTC
GTGCGCGAGACGCTCCTGCCCGGCGCGGTCCTGACCCGCGTGGCGGCGAGCCACATCCGGGTCGGCACCTTCCAGTTCTT
CGCGGCGCGGGGCGACGTCGAGGGCCTGCGGGCGCTCGCCGACCACGTCATCGCCCGGCACCATCCGGACGCCGCCGGGG
CCGCCAACCCCTACCGCGCGCTCCTGGAGGGCGTCGTCGCGGCCCAGGCCGACCTCGTGGCCCGCTGGCTGCACGTCGGC
TTCGTCCACGGGGTGATGAACACCGACAACATGTCGGTCGCCGGCGAGACGATCGATTACGGGCCGTGCGCGTTCCTCGA
CGCCTACGATCCCCGGACGGTCTACAGCTCCATCGACCGCAACGGCCGCTACGCCTACGGCCAGCAGCCGCGGATCGCGC
TCTGGAACCTGACGCGGCTCGCCGAGACCCTGCTGCCGCTCCTCGCCGAGGCCGAGGACGCCTCGGTCGCCGAGGCCGAG
GCGGCGCTGGCCACCTACGCGCCGCGCTTCGAGGCGGCCTATCACGGCGGCCTCGCCCGCAAGCTCGGACTCGCCGAGAC
CCGGGACGGCGACCCGGCCCTGGCGGGCGACCTCCTCAAGCGCATGGCCGAGAACCAGGCCGACTTCACCCTGACGTTCC
GCGCCCTCTGCGCCGCCGCGGAGCGCCCGGACGCCGATGCGACCGTGCGCGACCGGTTCGTCGATCCGACGAGCTACGAT
GCCTGGGCGGCCGACTGGCGCGCGCGGCTGGCGCAGGAGGCCCGCGACCCGGCCGAGACCGCCGCCGCGATGCGCGGGGT
GAACCCGGCCTTCATCCCGCGCAACCACCGGGTCGAGGCGATGATCGAGGCCGCCGTGGAGCGGGACGACTTCGCGCCGT
TCGCGACGCTCCTCGCCGTGCTGGCCCGCCCCTACGACGACCAGCCGGATCACGCCGCCTTCGCCGAGGCGCCCGCGGGC
GGCGGCGTCGGCTACCGGACCTTCTGCGGCACCTGA

Upstream 100 bases:

>100_bases
CGGTATCCGAGGCCCTCACGGGCGTCGACTGCACCGTCTGATCCTGCGCCCCCGACGGGCGCCGCTTGCCCCCCGACCCC
GCTCTCCATAGATCCCGACG

Downstream 100 bases:

>100_bases
GCCCGGGCGCCGCCGGTCAGGGCCGCGGCCAGGTGAAGATCTCGCGCACCCCGCCCGCGTGGCGAAACCAGTGGACGCGG
GTCGCTGGATTGAAACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTALPFDNSYARLPERFYARRPPTPVAAPRLVRLNRPLAEELGLDPDWLAGPDGVAALAGNTVPDGADPIAAAYAGHQFG
QFVPQLGDGRAVLLGEVVDRNGHRRDIQLKGAGPTPFSRRGDGRAALGPVLREYLVSEAMAALGIPTTRALAAVTTGERV
VRETLLPGAVLTRVAASHIRVGTFQFFAARGDVEGLRALADHVIARHHPDAAGAANPYRALLEGVVAAQADLVARWLHVG
FVHGVMNTDNMSVAGETIDYGPCAFLDAYDPRTVYSSIDRNGRYAYGQQPRIALWNLTRLAETLLPLLAEAEDASVAEAE
AALATYAPRFEAAYHGGLARKLGLAETRDGDPALAGDLLKRMAENQADFTLTFRALCAAAERPDADATVRDRFVDPTSYD
AWAADWRARLAQEARDPAETAAAMRGVNPAFIPRNHRVEAMIEAAVERDDFAPFATLLAVLARPYDDQPDHAAFAEAPAG
GGVGYRTFCGT

Sequences:

>Translated_491_residues
MTALPFDNSYARLPERFYARRPPTPVAAPRLVRLNRPLAEELGLDPDWLAGPDGVAALAGNTVPDGADPIAAAYAGHQFG
QFVPQLGDGRAVLLGEVVDRNGHRRDIQLKGAGPTPFSRRGDGRAALGPVLREYLVSEAMAALGIPTTRALAAVTTGERV
VRETLLPGAVLTRVAASHIRVGTFQFFAARGDVEGLRALADHVIARHHPDAAGAANPYRALLEGVVAAQADLVARWLHVG
FVHGVMNTDNMSVAGETIDYGPCAFLDAYDPRTVYSSIDRNGRYAYGQQPRIALWNLTRLAETLLPLLAEAEDASVAEAE
AALATYAPRFEAAYHGGLARKLGLAETRDGDPALAGDLLKRMAENQADFTLTFRALCAAAERPDADATVRDRFVDPTSYD
AWAADWRARLAQEARDPAETAAAMRGVNPAFIPRNHRVEAMIEAAVERDDFAPFATLLAVLARPYDDQPDHAAFAEAPAG
GGVGYRTFCGT
>Mature_490_residues
TALPFDNSYARLPERFYARRPPTPVAAPRLVRLNRPLAEELGLDPDWLAGPDGVAALAGNTVPDGADPIAAAYAGHQFGQ
FVPQLGDGRAVLLGEVVDRNGHRRDIQLKGAGPTPFSRRGDGRAALGPVLREYLVSEAMAALGIPTTRALAAVTTGERVV
RETLLPGAVLTRVAASHIRVGTFQFFAARGDVEGLRALADHVIARHHPDAAGAANPYRALLEGVVAAQADLVARWLHVGF
VHGVMNTDNMSVAGETIDYGPCAFLDAYDPRTVYSSIDRNGRYAYGQQPRIALWNLTRLAETLLPLLAEAEDASVAEAEA
ALATYAPRFEAAYHGGLARKLGLAETRDGDPALAGDLLKRMAENQADFTLTFRALCAAAERPDADATVRDRFVDPTSYDA
WAADWRARLAQEARDPAETAAAMRGVNPAFIPRNHRVEAMIEAAVERDDFAPFATLLAVLARPYDDQPDHAAFAEAPAGG
GVGYRTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=391, Percent_Identity=43.9897698209719, Blast_Score=269, Evalue=4e-72,
Organism=Escherichia coli, GI1787999, Length=479, Percent_Identity=41.7536534446764, Blast_Score=339, Evalue=2e-94,
Organism=Saccharomyces cerevisiae, GI6325034, Length=341, Percent_Identity=35.1906158357771, Blast_Score=187, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 52603; Mature: 52471

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALPFDNSYARLPERFYARRPPTPVAAPRLVRLNRPLAEELGLDPDWLAGPDGVAALAG
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHCC
NTVPDGADPIAAAYAGHQFGQFVPQLGDGRAVLLGEVVDRNGHRRDIQLKGAGPTPFSRR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCC
GDGRAALGPVLREYLVSEAMAALGIPTTRALAAVTTGERVVRETLLPGAVLTRVAASHIR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VGTFQFFAARGDVEGLRALADHVIARHHPDAAGAANPYRALLEGVVAAQADLVARWLHVG
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVHGVMNTDNMSVAGETIDYGPCAFLDAYDPRTVYSSIDRNGRYAYGQQPRIALWNLTRL
HHHHHCCCCCCEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCEECCCCCCEEHHHHHHH
AETLLPLLAEAEDASVAEAEAALATYAPRFEAAYHGGLARKLGLAETRDGDPALAGDLLK
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHH
RMAENQADFTLTFRALCAAAERPDADATVRDRFVDPTSYDAWAADWRARLAQEARDPAET
HHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH
AAAMRGVNPAFIPRNHRVEAMIEAAVERDDFAPFATLLAVLARPYDDQPDHAAFAEAPAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCC
GGVGYRTFCGT
CCCCCCCCCCC
>Mature Secondary Structure 
TALPFDNSYARLPERFYARRPPTPVAAPRLVRLNRPLAEELGLDPDWLAGPDGVAALAG
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHCC
NTVPDGADPIAAAYAGHQFGQFVPQLGDGRAVLLGEVVDRNGHRRDIQLKGAGPTPFSRR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCC
GDGRAALGPVLREYLVSEAMAALGIPTTRALAAVTTGERVVRETLLPGAVLTRVAASHIR
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VGTFQFFAARGDVEGLRALADHVIARHHPDAAGAANPYRALLEGVVAAQADLVARWLHVG
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVHGVMNTDNMSVAGETIDYGPCAFLDAYDPRTVYSSIDRNGRYAYGQQPRIALWNLTRL
HHHHHCCCCCCEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCEECCCCCCEEHHHHHHH
AETLLPLLAEAEDASVAEAEAALATYAPRFEAAYHGGLARKLGLAETRDGDPALAGDLLK
HHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHH
RMAENQADFTLTFRALCAAAERPDADATVRDRFVDPTSYDAWAADWRARLAQEARDPAET
HHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH
AAAMRGVNPAFIPRNHRVEAMIEAAVERDDFAPFATLLAVLARPYDDQPDHAAFAEAPAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCC
GGVGYRTFCGT
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA