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The map label for this gene is osmF [H]

Identifier: 170751273

GI number: 170751273

Start: 5219880

End: 5220866

Strand: Reverse

Name: osmF [H]

Synonym: Mrad2831_4890

Alternate gene names: 170751273

Gene position: 5220866-5219880 (Counterclockwise)

Preceding gene: 170751275

Following gene: 170751272

Centisome position: 85.9

GC content: 73.76

Gene sequence:

>987_bases
ATGAAGGCGAGCGCCCGACCGGACCTGACGGGCGCCGGAGCGGACCCGGAGGCCATGGTGAAGCGGATCCGGGCGGGTCT
CGTCGCGGCAGGACTCGCGCTGCTGGTCGCCCAGTGCGCGCCCACGCCCGGCGCGCCGGCGGCCGGGATCGTCGTCGCCT
CCAAGCTCGACACCGAGGGCGGGGTGCTGGGCAACATCATCCTGCAGGCGCTGCAGGCCCGGGGCCTGCCGATCGTCGAC
AAGATCCAGCTCGGCGCGACCGCGATCGTCCGGCAGGCCCTGATCGAGGGGCAGATCGACGTCTACCCGGAATACACCGG
CAACGCGGCGTTCTTCTTCGGGAAGGCCGATCTCCCGGTCTGGAAGGATCCGGAGGCGGCCTACCGCACGGCCCGGGACC
TGGATCGCGCGGCCAACGACCTCGTCTGGCTGACGCCCGCCTCGGCCAACAACACCTGGGCGATCGCCGTGCGCCAGGAG
ATCGCGCGGGCCGCGGGCCTGAGGACCATGAGCGACCTCGGCCGCTACGTGGCGGGCGGCGGCGCGATCAGGCTCGCCGC
CTCGTCGGAATTCGTGACCAGCCCGGGGGCGCTGCCGGCCTTCGGCCGCGCCTACGGCTTCACCCTCCGGCCGGACCAGC
TCGTCATCCTGGCCGGGGGCGACACGGCCGCCACGATCGCGGCGGCGGCGCGGGGCACCTCCGGCACGAACGCCGCCATG
GTGTTCGGCACCGACGGCAGCATGGCGGTCGCGCGCCTCGTGATGCTGGACGACGACAAGGGCGTCCAGCCGGTCTACCA
GCCGGCGCCCGTGGTCCGCGGCGCGGTCCTCAAGGCCCATCCGGAGATCGCCGCGGTGCTGGACCCGATCTTCCGCAGGC
TCGATCTGGCCACGCTCCGGGATCTCAACGGGCGGGTCCAGATCGGCGGCGAGCCGGCCTCCGCGGTCGCGGCGGACTTC
CTCCGGCGGAACGGGTTCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGGACGACGATCCGGGTGGAGAAAGTCGCGCCATGCCCCCTCTCACGTGCGGCACAGGCTCGGCGCGCCTCCGCCTCAAC
TCGATCGGGACCGGCCCTAG

Downstream 100 bases:

>100_bases
GCCGGTCACGCGGACAGCGCCGCGACCCGCGCCTCCGCGGGCGGGGTCGTCGGCCGCCCGCGGGATCACGCGTCGACAAG
CCGGGGCTCCGTCGGCAAGG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKASARPDLTGAGADPEAMVKRIRAGLVAAGLALLVAQCAPTPGAPAAGIVVASKLDTEGGVLGNIILQALQARGLPIVD
KIQLGATAIVRQALIEGQIDVYPEYTGNAAFFFGKADLPVWKDPEAAYRTARDLDRAANDLVWLTPASANNTWAIAVRQE
IARAAGLRTMSDLGRYVAGGGAIRLAASSEFVTSPGALPAFGRAYGFTLRPDQLVILAGGDTAATIAAAARGTSGTNAAM
VFGTDGSMAVARLVMLDDDKGVQPVYQPAPVVRGAVLKAHPEIAAVLDPIFRRLDLATLRDLNGRVQIGGEPASAVAADF
LRRNGFAR

Sequences:

>Translated_328_residues
MKASARPDLTGAGADPEAMVKRIRAGLVAAGLALLVAQCAPTPGAPAAGIVVASKLDTEGGVLGNIILQALQARGLPIVD
KIQLGATAIVRQALIEGQIDVYPEYTGNAAFFFGKADLPVWKDPEAAYRTARDLDRAANDLVWLTPASANNTWAIAVRQE
IARAAGLRTMSDLGRYVAGGGAIRLAASSEFVTSPGALPAFGRAYGFTLRPDQLVILAGGDTAATIAAAARGTSGTNAAM
VFGTDGSMAVARLVMLDDDKGVQPVYQPAPVVRGAVLKAHPEIAAVLDPIFRRLDLATLRDLNGRVQIGGEPASAVAADF
LRRNGFAR
>Mature_328_residues
MKASARPDLTGAGADPEAMVKRIRAGLVAAGLALLVAQCAPTPGAPAAGIVVASKLDTEGGVLGNIILQALQARGLPIVD
KIQLGATAIVRQALIEGQIDVYPEYTGNAAFFFGKADLPVWKDPEAAYRTARDLDRAANDLVWLTPASANNTWAIAVRQE
IARAAGLRTMSDLGRYVAGGGAIRLAASSEFVTSPGALPAFGRAYGFTLRPDQLVILAGGDTAATIAAAARGTSGTNAAM
VFGTDGSMAVARLVMLDDDKGVQPVYQPAPVVRGAVLKAHPEIAAVLDPIFRRLDLATLRDLNGRVQIGGEPASAVAADF
LRRNGFAR

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=302, Percent_Identity=50.9933774834437, Blast_Score=313, Evalue=7e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33932; Mature: 33932

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASARPDLTGAGADPEAMVKRIRAGLVAAGLALLVAQCAPTPGAPAAGIVVASKLDTEG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
GVLGNIILQALQARGLPIVDKIQLGATAIVRQALIEGQIDVYPEYTGNAAFFFGKADLPV
CHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCC
WKDPEAAYRTARDLDRAANDLVWLTPASANNTWAIAVRQEIARAAGLRTMSDLGRYVAGG
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHCCC
GAIRLAASSEFVTSPGALPAFGRAYGFTLRPDQLVILAGGDTAATIAAAARGTSGTNAAM
CEEEEEECCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCHHHHHHHHCCCCCCCEEE
VFGTDGSMAVARLVMLDDDKGVQPVYQPAPVVRGAVLKAHPEIAAVLDPIFRRLDLATLR
EEECCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLNGRVQIGGEPASAVAADFLRRNGFAR
CCCCEEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKASARPDLTGAGADPEAMVKRIRAGLVAAGLALLVAQCAPTPGAPAAGIVVASKLDTEG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
GVLGNIILQALQARGLPIVDKIQLGATAIVRQALIEGQIDVYPEYTGNAAFFFGKADLPV
CHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCC
WKDPEAAYRTARDLDRAANDLVWLTPASANNTWAIAVRQEIARAAGLRTMSDLGRYVAGG
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHCCC
GAIRLAASSEFVTSPGALPAFGRAYGFTLRPDQLVILAGGDTAATIAAAARGTSGTNAAM
CEEEEEECCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCHHHHHHHHCCCCCCCEEE
VFGTDGSMAVARLVMLDDDKGVQPVYQPAPVVRGAVLKAHPEIAAVLDPIFRRLDLATLR
EEECCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DLNGRVQIGGEPASAVAADFLRRNGFAR
CCCCEEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]