| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ytoA [H]
Identifier: 170748677
GI number: 170748677
Start: 2392277
End: 2393296
Strand: Reverse
Name: ytoA [H]
Synonym: Mrad2831_2259
Alternate gene names: 170748677
Gene position: 2393296-2392277 (Counterclockwise)
Preceding gene: 170748679
Following gene: 170748666
Centisome position: 39.38
GC content: 74.41
Gene sequence:
>1020_bases GTGACCCCCGACCTGATCCTGCCCTACGACGGCGTGCAGCCGGACTTCGCCAGTCGCCCCGTCTGGTGCGGCCGCGGCAG CACGGTGATCGGCGCGGCCCGGATCGGCGCGCAGGCCTGGATCGGCGACGAGGCGGTGATCCGCGCCGACGGCCAGACCG TCACCCTCGGCGACCGCTTCTGGCTCGGCCACCGCTCGACGGTGCACATCGCCACCCGGACGCACGGCACGCGGGTGGGC GACCGGGTCACGGTCGGGCGGAACAGCGTCGTCCACGCCTGCACCCTCGGCTCCGACGTGGTCGTCGAGGACGACGTGGT GATCCTCGACGGGGCCGAGATCGGCGACGGCGCGGTGATCGAGGCCGGCGCGACCGTCTTTCCGCGGTCGACGCTGCCCG GCGGCTTCGCCTACGCGGGCAGCCCGGCCCGCCCCAGCCGCGCGATCGGATCCGACGAGGTCGCCGAGCGTGCCGAGCGG GTGCGCGAGCGGATGGGCGACGGGCCCGCGCTTCCGCCGGGAGACGCGCCGGAGATCGAGGACAGCGTCTTCGTGGCGCG CACCGCCCGCCTGCGCGGGCGGGTCAGCCTCGGCGCCGGCGCGAGCGTGCTGTTCTGCTGCGACCTGAACGCGGAGGTCG GACCGATCGTGGTCGGCGCGGACACCAACATCCAGGACAACACGGTCATCCGCACCCGGGCCGACGGGGTGGTGATCGGG CGCGATACCACCATCGCCCACAATGTCCGGATCGCCGATTGCCGGATCGGGGCGCGGGCGCTGATCGGCATCGGCGCGAC GATCGCGTCGGGGACCCTCATCGCCGACGACGTCATGCTGGCGGCCGGAGCCACCACCGATCCCGGGCAGATCCTGGAGG CCGGCTACCTCTGGGGCGGCCGCCCGGCCCGCATCCTCGCGCCCCTCGACGCCGAGAAGCGCGCCCTGATGATCCGCATC GTCGAGGGCTACTGCCGGCACGGCCGGGAATACCGGGCCGCGCAGGAGGCGCTGGCCTGA
Upstream 100 bases:
>100_bases TATATGACACGGTCCGTCGCGCCCTGCCGGCCCGGCGCGCGGCCCGCCATCGTCCGGATGTCCCCGCGCGCTCCGGACGG CGCTGGAGAAGGATACCCGC
Downstream 100 bases:
>100_bases CGCTCCGCCGTCAGTGCTGCAGGATCTTCGACAGGAAGGTCTGCGCGCGCTCGGAGCGCGGGCTGCCGAAGAACTCGTCC TTCCGGGCATCCTCGACGAT
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTPDLILPYDGVQPDFASRPVWCGRGSTVIGAARIGAQAWIGDEAVIRADGQTVTLGDRFWLGHRSTVHIATRTHGTRVG DRVTVGRNSVVHACTLGSDVVVEDDVVILDGAEIGDGAVIEAGATVFPRSTLPGGFAYAGSPARPSRAIGSDEVAERAER VRERMGDGPALPPGDAPEIEDSVFVARTARLRGRVSLGAGASVLFCCDLNAEVGPIVVGADTNIQDNTVIRTRADGVVIG RDTTIAHNVRIADCRIGARALIGIGATIASGTLIADDVMLAAGATTDPGQILEAGYLWGGRPARILAPLDAEKRALMIRI VEGYCRHGREYRAAQEALA
Sequences:
>Translated_339_residues MTPDLILPYDGVQPDFASRPVWCGRGSTVIGAARIGAQAWIGDEAVIRADGQTVTLGDRFWLGHRSTVHIATRTHGTRVG DRVTVGRNSVVHACTLGSDVVVEDDVVILDGAEIGDGAVIEAGATVFPRSTLPGGFAYAGSPARPSRAIGSDEVAERAER VRERMGDGPALPPGDAPEIEDSVFVARTARLRGRVSLGAGASVLFCCDLNAEVGPIVVGADTNIQDNTVIRTRADGVVIG RDTTIAHNVRIADCRIGARALIGIGATIASGTLIADDVMLAAGATTDPGQILEAGYLWGGRPARILAPLDAEKRALMIRI VEGYCRHGREYRAAQEALA >Mature_338_residues TPDLILPYDGVQPDFASRPVWCGRGSTVIGAARIGAQAWIGDEAVIRADGQTVTLGDRFWLGHRSTVHIATRTHGTRVGD RVTVGRNSVVHACTLGSDVVVEDDVVILDGAEIGDGAVIEAGATVFPRSTLPGGFAYAGSPARPSRAIGSDEVAERAERV RERMGDGPALPPGDAPEIEDSVFVARTARLRGRVSLGAGASVLFCCDLNAEVGPIVVGADTNIQDNTVIRTRADGVVIGR DTTIAHNVRIADCRIGARALIGIGATIASGTLIADDVMLAAGATTDPGQILEAGYLWGGRPARILAPLDAEKRALMIRIV EGYCRHGREYRAAQEALA
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=163, Percent_Identity=30.6748466257669, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787667, Length=143, Percent_Identity=32.8671328671329, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35502; Mature: 35370
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDLILPYDGVQPDFASRPVWCGRGSTVIGAARIGAQAWIGDEAVIRADGQTVTLGDRF CCCCEECCCCCCCCCCCCCCEEECCCCEEEEEEHHCCEEEECCCEEEEECCCEEEECCEE WLGHRSTVHIATRTHGTRVGDRVTVGRNSVVHACTLGSDVVVEDDVVILDGAEIGDGAVI EECCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEECCEEEEECCCCCCCEEE EAGATVFPRSTLPGGFAYAGSPARPSRAIGSDEVAERAERVRERMGDGPALPPGDAPEIE ECCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DSVFVARTARLRGRVSLGAGASVLFCCDLNAEVGPIVVGADTNIQDNTVIRTRADGVVIG CCEEEEEEHHHCEEEEECCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCEEEEE RDTTIAHNVRIADCRIGARALIGIGATIASGTLIADDVMLAAGATTDPGQILEAGYLWGG CCCEEEECEEEEEECCCCEEEEEECHHHHCCEEEECCEEEECCCCCCCHHHHEECEEECC RPARILAPLDAEKRALMIRIVEGYCRHGREYRAAQEALA CCCEEEECCCCCCCEEEEHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TPDLILPYDGVQPDFASRPVWCGRGSTVIGAARIGAQAWIGDEAVIRADGQTVTLGDRF CCCEECCCCCCCCCCCCCCEEECCCCEEEEEEHHCCEEEECCCEEEEECCCEEEECCEE WLGHRSTVHIATRTHGTRVGDRVTVGRNSVVHACTLGSDVVVEDDVVILDGAEIGDGAVI EECCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEECCEEEEECCCCCCCEEE EAGATVFPRSTLPGGFAYAGSPARPSRAIGSDEVAERAERVRERMGDGPALPPGDAPEIE ECCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DSVFVARTARLRGRVSLGAGASVLFCCDLNAEVGPIVVGADTNIQDNTVIRTRADGVVIG CCEEEEEEHHHCEEEEECCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCEEEEE RDTTIAHNVRIADCRIGARALIGIGATIASGTLIADDVMLAAGATTDPGQILEAGYLWGG CCCEEEECEEEEEECCCCEEEEEECHHHHCCEEEECCEEEECCCCCCCHHHHEECEEECC RPARILAPLDAEKRALMIRIVEGYCRHGREYRAAQEALA CCCEEEECCCCCCCEEEEHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]