| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gltT [H]
Identifier: 170748666
GI number: 170748666
Start: 2381447
End: 2382727
Strand: Reverse
Name: gltT [H]
Synonym: Mrad2831_2248
Alternate gene names: 170748666
Gene position: 2382727-2381447 (Counterclockwise)
Preceding gene: 170748677
Following gene: 170748665
Centisome position: 39.2
GC content: 66.43
Gene sequence:
>1281_bases ATGGCAGGGTCGCGACTCACGACGATGATCTTCGTCGGCATGCTCCTCGGAATCGCCGTCGGCTACGCCTGCAGCATCAC CTGGCCCGACCCGCAGACCGCCAAGGAGATCGCCGGCTACATCGCGCTGGTCTCCGACGTGTTCCTGCGGCTGATCAAGA TGATCATCGCGCCGCTGGTCTTCTCCACGCTGGTGGTCGGCATCGCGCATCTCGGGGACACGGCGTCGGTCGGCCGGGTC GGCGGCAAGGCGCTGCTCTGGTTCGTCGGCGCCTCGTTCTGCTCGCTGATGCTCGGCCTCATCATGGTCAACCTGATGCA GCCCGGCCACAACCTGAACCTGCCGCTGCCCGATGCCGGGGCCGGCACCGGGCTCAAGGCGGCCTCGCTCTCGCTCAAGG AGTTCGTGACGCACCTCGTGCCGAAGAGCGCCGTCGAGGCGATGGCCAACAACGAGATCCTGCAGATCGTGGTCTTCTCG ATCTTCTTCGGCGTGGGCCTCGCCGCCCTCGGCGAGAAGGGGCGCCTGCTCGCGCAGGGTATCGAGGGCGTCGCCGACGT GATGCTCAAGGTGACGGGCTACGTGATGATGTTCGCCCCCGTGGCGGTGTTCGCCGCCATCGCGGCGACCATCACCACGC AGGGCATCGGCGTGCTGATCACCTACGGCAAGTTCCTCGTGGAGTTCTACATCGGCCTCGGCGTGCTCTGGGTGCTGCTG ATGGGGGTCGGCTTCCTGATGCTCGGGGCCGGCGGCATCGCGCGGCTGTTCAACCTGATCAAGGAGCCCTTCGTCCTGGC CTTCTCGACCGCGTCGAGCGAGGCGGCCTACCCGAAGATGCTGACGAACCTGGAGAAGTTCGGGGTGCCGAACCGCATCA CGTCGTTCGTTCTGCCGATGGGCTACTCGTTCAACCTCGACGGCTCGATGATGTACTGCACCTTCGCGGTGATGTTCATC GCGCAGGCCTACAACATCCCGCTGAGCTGGGGCCAGCAGCTCACGATGCTGCTCCTGCTGATGGTGACCTCGAAGGGCAT GGCCGGCGTGCCGCGCGCCTCGCTGGTGGTGATCTCGGCGACGCTGTCGCACTTCAACATCCCGGAGGCCGGGCTGCTGC TGATCATCGGGATCGACCAGTTCCTCGACATGGGCCGGTCGGCCACCAACGTGCTGGGCAACAGCGTCGCCACCGTGGCG GTCGCCAAGTGGGAGGGCCAGCTCAGCACCACCGACCAGCGCCTCGACCATGTCGGCACGGTGGCCTCGCCCGCGGAGTA G
Upstream 100 bases:
>100_bases GTAACGCCCCCTGGTCGGGCTTGCGTGTGGCGCAGTTCCTGCGACACGTTAACGAATTGAAATGCTCGATCATCCCGGGC CCGTGCGAGGAGCAGTACCG
Downstream 100 bases:
>100_bases GGGCCGGTCCCGGGAAATCTGCGCGCGCCGGGATGGCGGGCGCAAGAAGGCCGCTCTCATGAGCGCTCTCACGGGTGCCC GGAATCGCGGCGTGGCTTGT
Product: sodium:dicarboxylate symporter
Products: orotate [Cytoplasm]; fumarate [Cytoplasm]; malate [Cytoplasm]; Na (I) [Cytoplasm]; succinate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MAGSRLTTMIFVGMLLGIAVGYACSITWPDPQTAKEIAGYIALVSDVFLRLIKMIIAPLVFSTLVVGIAHLGDTASVGRV GGKALLWFVGASFCSLMLGLIMVNLMQPGHNLNLPLPDAGAGTGLKAASLSLKEFVTHLVPKSAVEAMANNEILQIVVFS IFFGVGLAALGEKGRLLAQGIEGVADVMLKVTGYVMMFAPVAVFAAIAATITTQGIGVLITYGKFLVEFYIGLGVLWVLL MGVGFLMLGAGGIARLFNLIKEPFVLAFSTASSEAAYPKMLTNLEKFGVPNRITSFVLPMGYSFNLDGSMMYCTFAVMFI AQAYNIPLSWGQQLTMLLLLMVTSKGMAGVPRASLVVISATLSHFNIPEAGLLLIIGIDQFLDMGRSATNVLGNSVATVA VAKWEGQLSTTDQRLDHVGTVASPAE
Sequences:
>Translated_426_residues MAGSRLTTMIFVGMLLGIAVGYACSITWPDPQTAKEIAGYIALVSDVFLRLIKMIIAPLVFSTLVVGIAHLGDTASVGRV GGKALLWFVGASFCSLMLGLIMVNLMQPGHNLNLPLPDAGAGTGLKAASLSLKEFVTHLVPKSAVEAMANNEILQIVVFS IFFGVGLAALGEKGRLLAQGIEGVADVMLKVTGYVMMFAPVAVFAAIAATITTQGIGVLITYGKFLVEFYIGLGVLWVLL MGVGFLMLGAGGIARLFNLIKEPFVLAFSTASSEAAYPKMLTNLEKFGVPNRITSFVLPMGYSFNLDGSMMYCTFAVMFI AQAYNIPLSWGQQLTMLLLLMVTSKGMAGVPRASLVVISATLSHFNIPEAGLLLIIGIDQFLDMGRSATNVLGNSVATVA VAKWEGQLSTTDQRLDHVGTVASPAE >Mature_425_residues AGSRLTTMIFVGMLLGIAVGYACSITWPDPQTAKEIAGYIALVSDVFLRLIKMIIAPLVFSTLVVGIAHLGDTASVGRVG GKALLWFVGASFCSLMLGLIMVNLMQPGHNLNLPLPDAGAGTGLKAASLSLKEFVTHLVPKSAVEAMANNEILQIVVFSI FFGVGLAALGEKGRLLAQGIEGVADVMLKVTGYVMMFAPVAVFAAIAATITTQGIGVLITYGKFLVEFYIGLGVLWVLLM GVGFLMLGAGGIARLFNLIKEPFVLAFSTASSEAAYPKMLTNLEKFGVPNRITSFVLPMGYSFNLDGSMMYCTFAVMFIA QAYNIPLSWGQQLTMLLLLMVTSKGMAGVPRASLVVISATLSHFNIPEAGLLLIIGIDQFLDMGRSATNVLGNSVATVAV AKWEGQLSTTDQRLDHVGTVASPAE
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=443, Percent_Identity=27.0880361173815, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI21314632, Length=397, Percent_Identity=27.2040302267003, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI40254478, Length=467, Percent_Identity=25.6959314775161, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI66773030, Length=415, Percent_Identity=24.3373493975904, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI4827012, Length=272, Percent_Identity=30.5147058823529, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI223468564, Length=248, Percent_Identity=29.0322580645161, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI223468566, Length=257, Percent_Identity=29.1828793774319, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI5032093, Length=376, Percent_Identity=26.8617021276596, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI262359914, Length=391, Percent_Identity=24.8081841432225, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI194239697, Length=251, Percent_Identity=28.6852589641434, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI301601644, Length=165, Percent_Identity=33.9393939393939, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI1789947, Length=425, Percent_Identity=37.6470588235294, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1790514, Length=372, Percent_Identity=39.7849462365591, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1788024, Length=420, Percent_Identity=24.047619047619, Blast_Score=94, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71996953, Length=472, Percent_Identity=25.635593220339, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71983106, Length=430, Percent_Identity=25.5813953488372, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71983099, Length=430, Percent_Identity=25.5813953488372, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17537407, Length=420, Percent_Identity=24.7619047619048, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI193206654, Length=453, Percent_Identity=23.841059602649, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI193206505, Length=432, Percent_Identity=25.2314814814815, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=24.8138957816377, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24583025, Length=465, Percent_Identity=25.3763440860215, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI17137668, Length=465, Percent_Identity=25.3763440860215, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24583023, Length=465, Percent_Identity=25.3763440860215, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI281360483, Length=414, Percent_Identity=26.5700483091787, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17137666, Length=414, Percent_Identity=26.5700483091787, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI281360481, Length=414, Percent_Identity=26.5700483091787, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45016; Mature: 44885
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSRLTTMIFVGMLLGIAVGYACSITWPDPQTAKEIAGYIALVSDVFLRLIKMIIAPLV CCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTLVVGIAHLGDTASVGRVGGKALLWFVGASFCSLMLGLIMVNLMQPGHNLNLPLPDAG HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGTGLKAASLSLKEFVTHLVPKSAVEAMANNEILQIVVFSIFFGVGLAALGEKGRLLAQG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IEGVADVMLKVTGYVMMFAPVAVFAAIAATITTQGIGVLITYGKFLVEFYIGLGVLWVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MGVGFLMLGAGGIARLFNLIKEPFVLAFSTASSEAAYPKMLTNLEKFGVPNRITSFVLPM HHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC GYSFNLDGSMMYCTFAVMFIAQAYNIPLSWGQQLTMLLLLMVTSKGMAGVPRASLVVISA CCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEH TLSHFNIPEAGLLLIIGIDQFLDMGRSATNVLGNSVATVAVAKWEGQLSTTDQRLDHVGT HHHHCCCCCCCEEEEEEHHHHHHCCCHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHHCC VASPAE CCCCCC >Mature Secondary Structure AGSRLTTMIFVGMLLGIAVGYACSITWPDPQTAKEIAGYIALVSDVFLRLIKMIIAPLV CCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTLVVGIAHLGDTASVGRVGGKALLWFVGASFCSLMLGLIMVNLMQPGHNLNLPLPDAG HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AGTGLKAASLSLKEFVTHLVPKSAVEAMANNEILQIVVFSIFFGVGLAALGEKGRLLAQG CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IEGVADVMLKVTGYVMMFAPVAVFAAIAATITTQGIGVLITYGKFLVEFYIGLGVLWVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MGVGFLMLGAGGIARLFNLIKEPFVLAFSTASSEAAYPKMLTNLEKFGVPNRITSFVLPM HHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC GYSFNLDGSMMYCTFAVMFIAQAYNIPLSWGQQLTMLLLLMVTSKGMAGVPRASLVVISA CCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEH TLSHFNIPEAGLLLIIGIDQFLDMGRSATNVLGNSVATVAVAKWEGQLSTTDQRLDHVGT HHHHCCCCCCCEEEEEEHHHHHHCCCHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHHCC VASPAE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotate [Periplasm]; fumarate [Periplasm]; malate [Periplasm]; Na (I) [Periplasm]; succinate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + orotate [Periplasm] = Na (I) [Cytoplasm] + orotate [Cytoplasm] Na (I) [Periplasm] + fumarate [Periplasm] = Na (I) [Cytoplasm] + fumarate [Cytoplasm] Na (I) [Periplasm] + malate [Periplasm] = Na (I) [Cytoplasm] + malate [Cytoplasm] Na
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1359385 [H]