| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is arnT [H]
Identifier: 170748582
GI number: 170748582
Start: 2305472
End: 2307193
Strand: Reverse
Name: arnT [H]
Synonym: Mrad2831_2164
Alternate gene names: 170748582
Gene position: 2307193-2305472 (Counterclockwise)
Preceding gene: 170748583
Following gene: 170748581
Centisome position: 37.96
GC content: 76.07
Gene sequence:
>1722_bases ATGACCACGAGCCTCTCCGCCGGCGGCGCGCCGCGCCTTGCCCCCGTCGACCGGATCGGCCGCGGGCTCGACGCGCTGAG CCTCACCCATGCCAGGGCCGTCGCCGCCCTGCTGGCGCTGTGCCTGATCCTGTTCCTGCCGGGGCAGATCTCGCTGCAGC CGATGGACCGGGACGAGCCCCGCTTCGCCCAGGCCTCGAAGCAGATGCTGGAGAGCGGCGACCTCGTGGATATCCGCTTC CAGGGGGAGGCGCGGCACAAGAAGCCGGTGGGGATCTACTGGGCGCAGGCCGCCGCCGTGGCGGCCGGCGAGGCGCTGGG CGTGCCCGGGGCCCGCACCCAGATCGCCCTGTACCGCTTCCCGTCGCTGATCGGCGCCGTCGCCTCGGTTCTTCTCGCCT ACTGGGCGGCGCTCGCCTTCCTGCCCCGGCGGTCGGCGCTGCTGGCGGCCGCCCTCTACGGCGCCTGCCTGATGCTCTCG GCCGAGGCCCACCTCGCCAAGACCGACGCGCTGCTCGCCGCCTGCGCCACCGCGAGCCTCGCCGCGCTCGCCCACGCGTG GCTGGCGCCGCGGGACGGTCGGCCGGTCTCGGGACCGACCTTCGCGGCGTTCTGGCTCGGGATGGCGGTCGGGATCCTGG TGAAGGGGCCGATGGTTCCGCTCTTCGCCGCGCTGCCGGCGCTCGGCCTGTCGCTCGCGGCGCGGTCCGGCCGCTGGCTG CTGCCGCTCCGGCCCTGGCCGGGCCTCGCCCTCACGCTCCTGCTGGTGGCGCCCTGGTTCGCGGCGATCGCCTGGAAGAG CGGGGGCGCGTTCTACGCCGAGGCGGTCGGCCACGACATGCTCGGCAAGGTCGGCGGGGCGGCCGAGCGGCACTGGGGAC CGCCCGGCGCCTACGCGCTCGTGTTCTTCGCGACCTTCTGGCCGGCGGCGGCCTTCACCGCCATGAGCCTGCCGTTCGCT TGGCGGGCGCGACGGGAGCCCGCCGTGGCCTTCCTGATCGCCGCGGTGCTGCCGGCCTGGCTGATCTTCGAGGCGGTGCC CACCAAGCTGCCCCACTACGTGCTGCCGCTGATGCCCTGGCTCGCGATCCTGACCGTGCTGGCGCTGAGCCGGGGGGCGC TGGACCCGCGCCTGCGGGGCGCCCGCCTGACGGCCCTGCTGCTGCCGGCGATCCCGGTCGCCCTGACCCTCGGCCTCTGC CTCGCCGGCTGGCGGCTCGACAGCCACACGATCCCGTGGCCGGCCCTGCCGCTGCTCGCCGCCGCCTGCGCGGTCGCGGT CCTGGCCTGGCTCGCCTTCGCGCAGGGATCCGCCGAGCGCGCCCTCGTCCTCGGGGTGCTGGCCTCCGCCCTGCTGGGCC CGGCGGTGCTGGGCGTGGCGCAGCGCTCGCTGCCGGCCCTGAAGGTCTCGCCGCGGCTCGCGGCCCTGCGCGACCGCGCG CCCTGCCCGAACCCGCTTGTGGCGAGCCTCGGATACCGCGAGCCGAGCCTCGTCTTCCTGATCGGCACCGGCCTCGCCCT GCCGCCCGACGGGGCCGCCGCCCGGTCCTTCCTCGAGGGCGGCGGCTGTCGCCTGCTCTTCGTCGAATCCCGTGATCGCG ACGATTTCAACGCGGCCTGGCCGGTCGGCCGCGGCGCGCCCGCGCCCCTGGCGGAGGTCGAGGGCTTCAACCTCAACACC GGCCGCCGGGTCTTCGTGACGGCCTACGCGGTGGCCCCGTGA
Upstream 100 bases:
>100_bases GGTGCCGCATCCGCGCGTCGTGATGGGCCCGCGCCGTCGCGACCGGCGACGGCATCGCTGCATTTGACCTCGCGCCGCGT TCCTGATTGACCGGCCCGGT
Downstream 100 bases:
>100_bases GCGGATCCCCCCATCTCAGCGTCGTCGTGCCGGTCAAGAACGAGGCCGGCAACATCGCGCCCCTGGTGGCCGAGATCGAG GCCGCCTGCGCGGGCCTCGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTTSLSAGGAPRLAPVDRIGRGLDALSLTHARAVAALLALCLILFLPGQISLQPMDRDEPRFAQASKQMLESGDLVDIRF QGEARHKKPVGIYWAQAAAVAAGEALGVPGARTQIALYRFPSLIGAVASVLLAYWAALAFLPRRSALLAAALYGACLMLS AEAHLAKTDALLAACATASLAALAHAWLAPRDGRPVSGPTFAAFWLGMAVGILVKGPMVPLFAALPALGLSLAARSGRWL LPLRPWPGLALTLLLVAPWFAAIAWKSGGAFYAEAVGHDMLGKVGGAAERHWGPPGAYALVFFATFWPAAAFTAMSLPFA WRARREPAVAFLIAAVLPAWLIFEAVPTKLPHYVLPLMPWLAILTVLALSRGALDPRLRGARLTALLLPAIPVALTLGLC LAGWRLDSHTIPWPALPLLAAACAVAVLAWLAFAQGSAERALVLGVLASALLGPAVLGVAQRSLPALKVSPRLAALRDRA PCPNPLVASLGYREPSLVFLIGTGLALPPDGAAARSFLEGGGCRLLFVESRDRDDFNAAWPVGRGAPAPLAEVEGFNLNT GRRVFVTAYAVAP
Sequences:
>Translated_573_residues MTTSLSAGGAPRLAPVDRIGRGLDALSLTHARAVAALLALCLILFLPGQISLQPMDRDEPRFAQASKQMLESGDLVDIRF QGEARHKKPVGIYWAQAAAVAAGEALGVPGARTQIALYRFPSLIGAVASVLLAYWAALAFLPRRSALLAAALYGACLMLS AEAHLAKTDALLAACATASLAALAHAWLAPRDGRPVSGPTFAAFWLGMAVGILVKGPMVPLFAALPALGLSLAARSGRWL LPLRPWPGLALTLLLVAPWFAAIAWKSGGAFYAEAVGHDMLGKVGGAAERHWGPPGAYALVFFATFWPAAAFTAMSLPFA WRARREPAVAFLIAAVLPAWLIFEAVPTKLPHYVLPLMPWLAILTVLALSRGALDPRLRGARLTALLLPAIPVALTLGLC LAGWRLDSHTIPWPALPLLAAACAVAVLAWLAFAQGSAERALVLGVLASALLGPAVLGVAQRSLPALKVSPRLAALRDRA PCPNPLVASLGYREPSLVFLIGTGLALPPDGAAARSFLEGGGCRLLFVESRDRDDFNAAWPVGRGAPAPLAEVEGFNLNT GRRVFVTAYAVAP >Mature_572_residues TTSLSAGGAPRLAPVDRIGRGLDALSLTHARAVAALLALCLILFLPGQISLQPMDRDEPRFAQASKQMLESGDLVDIRFQ GEARHKKPVGIYWAQAAAVAAGEALGVPGARTQIALYRFPSLIGAVASVLLAYWAALAFLPRRSALLAAALYGACLMLSA EAHLAKTDALLAACATASLAALAHAWLAPRDGRPVSGPTFAAFWLGMAVGILVKGPMVPLFAALPALGLSLAARSGRWLL PLRPWPGLALTLLLVAPWFAAIAWKSGGAFYAEAVGHDMLGKVGGAAERHWGPPGAYALVFFATFWPAAAFTAMSLPFAW RARREPAVAFLIAAVLPAWLIFEAVPTKLPHYVLPLMPWLAILTVLALSRGALDPRLRGARLTALLLPAIPVALTLGLCL AGWRLDSHTIPWPALPLLAAACAVAVLAWLAFAQGSAERALVLGVLASALLGPAVLGVAQRSLPALKVSPRLAALRDRAP CPNPLVASLGYREPSLVFLIGTGLALPPDGAAARSFLEGGGCRLLFVESRDRDDFNAAWPVGRGAPAPLAEVEGFNLNTG RRVFVTAYAVAP
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=364, Percent_Identity=25, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 60030; Mature: 59899
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLSAGGAPRLAPVDRIGRGLDALSLTHARAVAALLALCLILFLPGQISLQPMDRDEP CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC RFAQASKQMLESGDLVDIRFQGEARHKKPVGIYWAQAAAVAAGEALGVPGARTQIALYRF HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCEEHHHHH PSLIGAVASVLLAYWAALAFLPRRSALLAAALYGACLMLSAEAHLAKTDALLAACATASL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AALAHAWLAPRDGRPVSGPTFAAFWLGMAVGILVKGPMVPLFAALPALGLSLAARSGRWL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEE LPLRPWPGLALTLLLVAPWFAAIAWKSGGAFYAEAVGHDMLGKVGGAAERHWGPPGAYAL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCHHHHHHHCCCHHHCCCCCHHHHH VFFATFWPAAAFTAMSLPFAWRARREPAVAFLIAAVLPAWLIFEAVPTKLPHYVLPLMPW HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAILTVLALSRGALDPRLRGARLTALLLPAIPVALTLGLCLAGWRLDSHTIPWPALPLLA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHH AACAVAVLAWLAFAQGSAERALVLGVLASALLGPAVLGVAQRSLPALKVSPRLAALRDRA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCC PCPNPLVASLGYREPSLVFLIGTGLALPPDGAAARSFLEGGGCRLLFVESRDRDDFNAAW CCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC PVGRGAPAPLAEVEGFNLNTGRRVFVTAYAVAP CCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TTSLSAGGAPRLAPVDRIGRGLDALSLTHARAVAALLALCLILFLPGQISLQPMDRDEP CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC RFAQASKQMLESGDLVDIRFQGEARHKKPVGIYWAQAAAVAAGEALGVPGARTQIALYRF HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCEEHHHHH PSLIGAVASVLLAYWAALAFLPRRSALLAAALYGACLMLSAEAHLAKTDALLAACATASL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AALAHAWLAPRDGRPVSGPTFAAFWLGMAVGILVKGPMVPLFAALPALGLSLAARSGRWL HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEE LPLRPWPGLALTLLLVAPWFAAIAWKSGGAFYAEAVGHDMLGKVGGAAERHWGPPGAYAL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCHHHHHHHCCCHHHCCCCCHHHHH VFFATFWPAAAFTAMSLPFAWRARREPAVAFLIAAVLPAWLIFEAVPTKLPHYVLPLMPW HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAILTVLALSRGALDPRLRGARLTALLLPAIPVALTLGLCLAGWRLDSHTIPWPALPLLA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHH AACAVAVLAWLAFAQGSAERALVLGVLASALLGPAVLGVAQRSLPALKVSPRLAALRDRA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCC PCPNPLVASLGYREPSLVFLIGTGLALPPDGAAARSFLEGGGCRLLFVESRDRDDFNAAW CCCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCC PVGRGAPAPLAEVEGFNLNTGRRVFVTAYAVAP CCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA