Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is ycjX [H]
Identifier: 170748555
GI number: 170748555
Start: 2276878
End: 2278386
Strand: Reverse
Name: ycjX [H]
Synonym: Mrad2831_2137
Alternate gene names: 170748555
Gene position: 2278386-2276878 (Counterclockwise)
Preceding gene: 170748556
Following gene: 170748554
Centisome position: 37.49
GC content: 75.22
Gene sequence:
>1509_bases TTGCGGTTCGGCCCCGGCCGCGCCACCTCTGCCCGGCCCGTTCCCCTCACCCCGAGCCCGCCCGTGCCCCTGATCGACCT TGCCGCGCGTGCCGGCTCGGCCGTCAAAGCCTTCGCCGAAGCCTCGCACGACCTGCTGGTCCAGCCGACGCTGCGACTGG GCGTGACCGGGCTCGCGCGGTCGGGCAAGACCGTGTTCACCACGGCGCTGATCCACCACCTCGTGGAGACGCACGCACTG CCGGCCTTCGCGCCCGCGCAGGAGGGCCGCCTGCGCCGGGCCAAGCTGGTGCCCCAGCCCGACGACGACGTGCCGCGCTT CCCGTTCGAGGAGCATTTCGCGACCCTCACCGAGGCGCGGCGGTGGCCGCGCTCCACCGACCGGATCAGCCAGTTCCGCC TGGAGATCGCCTACGAGCGCGCCGCCGGCTGGCGCTCCGGCCCCGCGACCCTGATGCTCGACGTGGTCGACTACCCGGGC GAGTGGCTCCTCGACCTCGCGCTGATCGAGACCAGCTACACCGCGTGGTCCCGGGCCACGATCGGCGGCACGCGCCGACC CGGCCGCGCCGCCGTGGCGGCGCCCTGGCTCGAGGCGCTCAAGGGCTTCGACCCGAACGGCCCCCTCGACGAGGTCGCGG CCGAGCGGGCGAGCGACGCCTTCAAGACCTACCTCGCGGGCCTGCGCGCCGGCCCGGAAGCCGTGGCGACGACGCCCCCG GGCCGGTTCCTGATGCCGGGCGACCTCGCGGGCTCGCCGGCGCTCACCTTCGCGCCCCTCGACCGGCTCACCGAGACGAT CGCCCCCGACAGCCTCGCCGGGCTGATGGAGCGGCGCTTCGAGGCCTACAAGGCCAAGGTCGTGACGCCGTTCTTCCGCG ACCATTTCCAGCGAGTCGACCGGCAGATCGTGCTGGTGGACGTCCTGTCGGCGGTCGATGCCGGCCCGACCGCCCTGGCG GAGCTGGAGGAGGCGCTGGACGCGGTGCTGCTCAGCCTCAACATCGGCCGCAACACGGTGCTGTCGCGGCTGTTCGCCCC CCGGGCCGACCGGGTCCTGTTCGCCGCCACCAAGGCCGACCACCTCCACCAGACGAGCCACGACCGGCTCGACGCGCTGC TGCGGCTGCTCGTGTCGCGGGCCATGCGGCGGACCGAGGCCGCGGGCGCCCGGGTCGGCACCGTGGCGCTGGCCTCCGTG CGCGCCACCCGCGAGACCACCGTCCACGACGGGTCGGAGACGCTGCGGGCGGTGGCCGGCACCCCGGAGGCCGGCGAGGT GGTGGGCGACGAGGTCTTCGACGGCGACAGCGAGGCCGCGATTTTCCCGGGCGAGCTGCCCGCCCGTGCCGAGGCGGTGC TGGAGGGTGCGGTCGAGCCGGGCTCGCTGCGCTTCCCGCGCTTCCGGCCGCCGCTGGTGCGGCCCGACGGGTTCGGCCGC CCCGGGCACCTGCCGCAGATCCGGCTCGACCGGGCGATGCAGTTCCTGATCGGCGACCGGCTGGCGTGA
Upstream 100 bases:
>100_bases CGGCCCGGACCTCGTGGCCGGGGCGATCGCCCGGCTGAGGCCGCTCACGCCGGCCGCCAGCACCGCGCCGCCCTAGGGGA GCCTTCCCGAGCGGCAAGCC
Downstream 100 bases:
>100_bases CGATGTGTGCGATGCGGAGCCCGCGACCATGACCTCCGGCCAGAAACCCCGCGCCTTCCGGATCAATCCCGAGCCGGCCG CCGCGCCGAGCGTGACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MRFGPGRATSARPVPLTPSPPVPLIDLAARAGSAVKAFAEASHDLLVQPTLRLGVTGLARSGKTVFTTALIHHLVETHAL PAFAPAQEGRLRRAKLVPQPDDDVPRFPFEEHFATLTEARRWPRSTDRISQFRLEIAYERAAGWRSGPATLMLDVVDYPG EWLLDLALIETSYTAWSRATIGGTRRPGRAAVAAPWLEALKGFDPNGPLDEVAAERASDAFKTYLAGLRAGPEAVATTPP GRFLMPGDLAGSPALTFAPLDRLTETIAPDSLAGLMERRFEAYKAKVVTPFFRDHFQRVDRQIVLVDVLSAVDAGPTALA ELEEALDAVLLSLNIGRNTVLSRLFAPRADRVLFAATKADHLHQTSHDRLDALLRLLVSRAMRRTEAAGARVGTVALASV RATRETTVHDGSETLRAVAGTPEAGEVVGDEVFDGDSEAAIFPGELPARAEAVLEGAVEPGSLRFPRFRPPLVRPDGFGR PGHLPQIRLDRAMQFLIGDRLA
Sequences:
>Translated_502_residues MRFGPGRATSARPVPLTPSPPVPLIDLAARAGSAVKAFAEASHDLLVQPTLRLGVTGLARSGKTVFTTALIHHLVETHAL PAFAPAQEGRLRRAKLVPQPDDDVPRFPFEEHFATLTEARRWPRSTDRISQFRLEIAYERAAGWRSGPATLMLDVVDYPG EWLLDLALIETSYTAWSRATIGGTRRPGRAAVAAPWLEALKGFDPNGPLDEVAAERASDAFKTYLAGLRAGPEAVATTPP GRFLMPGDLAGSPALTFAPLDRLTETIAPDSLAGLMERRFEAYKAKVVTPFFRDHFQRVDRQIVLVDVLSAVDAGPTALA ELEEALDAVLLSLNIGRNTVLSRLFAPRADRVLFAATKADHLHQTSHDRLDALLRLLVSRAMRRTEAAGARVGTVALASV RATRETTVHDGSETLRAVAGTPEAGEVVGDEVFDGDSEAAIFPGELPARAEAVLEGAVEPGSLRFPRFRPPLVRPDGFGR PGHLPQIRLDRAMQFLIGDRLA >Mature_502_residues MRFGPGRATSARPVPLTPSPPVPLIDLAARAGSAVKAFAEASHDLLVQPTLRLGVTGLARSGKTVFTTALIHHLVETHAL PAFAPAQEGRLRRAKLVPQPDDDVPRFPFEEHFATLTEARRWPRSTDRISQFRLEIAYERAAGWRSGPATLMLDVVDYPG EWLLDLALIETSYTAWSRATIGGTRRPGRAAVAAPWLEALKGFDPNGPLDEVAAERASDAFKTYLAGLRAGPEAVATTPP GRFLMPGDLAGSPALTFAPLDRLTETIAPDSLAGLMERRFEAYKAKVVTPFFRDHFQRVDRQIVLVDVLSAVDAGPTALA ELEEALDAVLLSLNIGRNTVLSRLFAPRADRVLFAATKADHLHQTSHDRLDALLRLLVSRAMRRTEAAGARVGTVALASV RATRETTVHDGSETLRAVAGTPEAGEVVGDEVFDGDSEAAIFPGELPARAEAVLEGAVEPGSLRFPRFRPPLVRPDGFGR PGHLPQIRLDRAMQFLIGDRLA
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=36.7741935483871, Blast_Score=271, Evalue=6e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 54300; Mature: 54300
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGPGRATSARPVPLTPSPPVPLIDLAARAGSAVKAFAEASHDLLVQPTLRLGVTGLAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCEEECCHHHHCCHHHHC SGKTVFTTALIHHLVETHALPAFAPAQEGRLRRAKLVPQPDDDVPRFPFEEHFATLTEAR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHH RWPRSTDRISQFRLEIAYERAAGWRSGPATLMLDVVDYPGEWLLDLALIETSYTAWSRAT HCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC IGGTRRPGRAAVAAPWLEALKGFDPNGPLDEVAAERASDAFKTYLAGLRAGPEAVATTPP CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRFLMPGDLAGSPALTFAPLDRLTETIAPDSLAGLMERRFEAYKAKVVTPFFRDHFQRVD CCEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC RQIVLVDVLSAVDAGPTALAELEEALDAVLLSLNIGRNTVLSRLFAPRADRVLFAATKAD CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHH HLHQTSHDRLDALLRLLVSRAMRRTEAAGARVGTVALASVRATRETTVHDGSETLRAVAG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC TPEAGEVVGDEVFDGDSEAAIFPGELPARAEAVLEGAVEPGSLRFPRFRPPLVRPDGFGR CCCCCHHHCCHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGHLPQIRLDRAMQFLIGDRLA CCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRFGPGRATSARPVPLTPSPPVPLIDLAARAGSAVKAFAEASHDLLVQPTLRLGVTGLAR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCEEECCHHHHCCHHHHC SGKTVFTTALIHHLVETHALPAFAPAQEGRLRRAKLVPQPDDDVPRFPFEEHFATLTEAR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHH RWPRSTDRISQFRLEIAYERAAGWRSGPATLMLDVVDYPGEWLLDLALIETSYTAWSRAT HCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCC IGGTRRPGRAAVAAPWLEALKGFDPNGPLDEVAAERASDAFKTYLAGLRAGPEAVATTPP CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRFLMPGDLAGSPALTFAPLDRLTETIAPDSLAGLMERRFEAYKAKVVTPFFRDHFQRVD CCEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC RQIVLVDVLSAVDAGPTALAELEEALDAVLLSLNIGRNTVLSRLFAPRADRVLFAATKAD CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHH HLHQTSHDRLDALLRLLVSRAMRRTEAAGARVGTVALASVRATRETTVHDGSETLRAVAG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC TPEAGEVVGDEVFDGDSEAAIFPGELPARAEAVLEGAVEPGSLRFPRFRPPLVRPDGFGR CCCCCHHHCCHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGHLPQIRLDRAMQFLIGDRLA CCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]