Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
---|---|
Accession | NC_010505 |
Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170748556
Identifier: 170748556
GI number: 170748556
Start: 2278411
End: 2279538
Strand: Reverse
Name: 170748556
Synonym: Mrad2831_2138
Alternate gene names: NA
Gene position: 2279538-2278411 (Counterclockwise)
Preceding gene: 170748557
Following gene: 170748555
Centisome position: 37.51
GC content: 79.61
Gene sequence:
>1128_bases GTGCTGCTGAACGCGCTGATCCTGGTCACGGCCCTGGTGCCGCACGCCGAGGCCGGCGCGGACGCCCTCGCGCGCGCCCT GCCGCTTCCGGCGGCGGCCACCGCCCCGGCGGACGGACGGCCCCCGCGCTTCGATCCCGCGACCCGCTCCGTGTCCAACT GGCACGCCCAGACCGGCGCGCAGCTGACGCCGCGGGCGCTGGCGGTCACGGCCTCGCTGGCCGACGACCCGCCCTACGTC GCCCGCTGCGTGCGGCTCAACAACGGCTGGTGCATCAAGTCCGCCCGCTGGCCCGGTGAGATCGGCGCCGACGGGGAGGG CCACACCGCCTTCGCCACCCTCGACGACGGCGCCGACGCCGCCGCGAGCCTGCTGCGGCGCTACTACCGGGATTACGGCC GCCGCACGGCGCTGGCCATCGTGCGCCGCTGGGCGCCGGCCGAGTGCCGCGTCGGCGCCGCGCCCGCGCGGCCGGGCCGG GCGGTGGCGACGCCCGCCGTCTCGGCGGCCCTCGCGCCCCGGGGGCTCGGGCGGACCCTGCGCGCCCGCTACCTCGCCGC GCACCGCCCCGGCGGCGCGCCGCGCGGCCGGGCAGCCCTGCGGGTGCAGCCCTGGTCGCCGCTCGCCCGGATGGCCGGCC GCCCGAGCAGGCGCCCGGCCGCCATACCGCGGGTGGCGATGCTGCAGCCGGTTCCCGACATCGCCGCCGGGATCTCCGCC TCCAGCGGCCGCCCGGCCGGGAGCGTCGCCGACCCGTCCGCACTCCTCGACCGGAAGCCGGGCCGCGTCCCGAGCGCCGA GCGGATGGTGGCCGAATCCGCGCTTCTGCCCGCGATCGCGGCCGGCCTGCCGGTGCTCGACCTGCGCCTGCCGGCCCCGC TCTGCACCGGCGACGAGGTCCGGATCCAGGCCTACGCCAACCGGATCAGCGCCAGCGTCGGCCTGAAGCCCGGCGACGAC CTCGACCTGTTCGGGCCGGACGGCGCGCCGCGCGCCAACTTGGCGCCCGTGATGCTGGCGATGTCGGCGGTGGAACTCGG CACGCTGCGGGCCGGCCCGGACCTCGTGGCCGGGGCGATCGCCCGGCTGAGGCCGCTCACGCCGGCCGCCAGCACCGCGC CGCCCTAG
Upstream 100 bases:
>100_bases ATCGCGGCCGGCGACCCGCGGCTGCACGAGGCCGCGCTCAAGGTTCTGAACCCGTGACGCGCGGCCGTCTCCAGTCCGTC CGCCGCGAAGGTTCGTCCGC
Downstream 100 bases:
>100_bases GGGAGCCTTCCCGAGCGGCAAGCCTTGCGGTTCGGCCCCGGCCGCGCCACCTCTGCCCGGCCCGTTCCCCTCACCCCGAG CCCGCCCGTGCCCCTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLLNALILVTALVPHAEAGADALARALPLPAAATAPADGRPPRFDPATRSVSNWHAQTGAQLTPRALAVTASLADDPPYV ARCVRLNNGWCIKSARWPGEIGADGEGHTAFATLDDGADAAASLLRRYYRDYGRRTALAIVRRWAPAECRVGAAPARPGR AVATPAVSAALAPRGLGRTLRARYLAAHRPGGAPRGRAALRVQPWSPLARMAGRPSRRPAAIPRVAMLQPVPDIAAGISA SSGRPAGSVADPSALLDRKPGRVPSAERMVAESALLPAIAAGLPVLDLRLPAPLCTGDEVRIQAYANRISASVGLKPGDD LDLFGPDGAPRANLAPVMLAMSAVELGTLRAGPDLVAGAIARLRPLTPAASTAPP
Sequences:
>Translated_375_residues MLLNALILVTALVPHAEAGADALARALPLPAAATAPADGRPPRFDPATRSVSNWHAQTGAQLTPRALAVTASLADDPPYV ARCVRLNNGWCIKSARWPGEIGADGEGHTAFATLDDGADAAASLLRRYYRDYGRRTALAIVRRWAPAECRVGAAPARPGR AVATPAVSAALAPRGLGRTLRARYLAAHRPGGAPRGRAALRVQPWSPLARMAGRPSRRPAAIPRVAMLQPVPDIAAGISA SSGRPAGSVADPSALLDRKPGRVPSAERMVAESALLPAIAAGLPVLDLRLPAPLCTGDEVRIQAYANRISASVGLKPGDD LDLFGPDGAPRANLAPVMLAMSAVELGTLRAGPDLVAGAIARLRPLTPAASTAPP >Mature_375_residues MLLNALILVTALVPHAEAGADALARALPLPAAATAPADGRPPRFDPATRSVSNWHAQTGAQLTPRALAVTASLADDPPYV ARCVRLNNGWCIKSARWPGEIGADGEGHTAFATLDDGADAAASLLRRYYRDYGRRTALAIVRRWAPAECRVGAAPARPGR AVATPAVSAALAPRGLGRTLRARYLAAHRPGGAPRGRAALRVQPWSPLARMAGRPSRRPAAIPRVAMLQPVPDIAAGISA SSGRPAGSVADPSALLDRKPGRVPSAERMVAESALLPAIAAGLPVLDLRLPAPLCTGDEVRIQAYANRISASVGLKPGDD LDLFGPDGAPRANLAPVMLAMSAVELGTLRAGPDLVAGAIARLRPLTPAASTAPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38677; Mature: 38677
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNALILVTALVPHAEAGADALARALPLPAAATAPADGRPPRFDPATRSVSNWHAQTGA CHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCC QLTPRALAVTASLADDPPYVARCVRLNNGWCIKSARWPGEIGADGEGHTAFATLDDGADA CCCCCEEEEEECCCCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHH AASLLRRYYRDYGRRTALAIVRRWAPAECRVGAAPARPGRAVATPAVSAALAPRGLGRTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHH RARYLAAHRPGGAPRGRAALRVQPWSPLARMAGRPSRRPAAIPRVAMLQPVPDIAAGISA HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHCCCC SSGRPAGSVADPSALLDRKPGRVPSAERMVAESALLPAIAAGLPVLDLRLPAPLCTGDEV CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE RIQAYANRISASVGLKPGDDLDLFGPDGAPRANLAPVMLAMSAVELGTLRAGPDLVAGAI EHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH ARLRPLTPAASTAPP HHHCCCCCCCCCCCC >Mature Secondary Structure MLLNALILVTALVPHAEAGADALARALPLPAAATAPADGRPPRFDPATRSVSNWHAQTGA CHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCC QLTPRALAVTASLADDPPYVARCVRLNNGWCIKSARWPGEIGADGEGHTAFATLDDGADA CCCCCEEEEEECCCCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHH AASLLRRYYRDYGRRTALAIVRRWAPAECRVGAAPARPGRAVATPAVSAALAPRGLGRTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHH RARYLAAHRPGGAPRGRAALRVQPWSPLARMAGRPSRRPAAIPRVAMLQPVPDIAAGISA HHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHCCCC SSGRPAGSVADPSALLDRKPGRVPSAERMVAESALLPAIAAGLPVLDLRLPAPLCTGDEV CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE RIQAYANRISASVGLKPGDDLDLFGPDGAPRANLAPVMLAMSAVELGTLRAGPDLVAGAI EHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH ARLRPLTPAASTAPP HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA