Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
---|---|
Accession | NC_010505 |
Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170748548
Identifier: 170748548
GI number: 170748548
Start: 2270646
End: 2271632
Strand: Reverse
Name: 170748548
Synonym: Mrad2831_2130
Alternate gene names: NA
Gene position: 2271632-2270646 (Counterclockwise)
Preceding gene: 170748549
Following gene: 170748547
Centisome position: 37.38
GC content: 75.99
Gene sequence:
>987_bases ATGAGCACCGTTCGCCGATTTCTGGTCGCACCGTCCCTGGTCCGCCTGATCCGCAAGGAGCGGGGCGGCGCCCGGATCAC CGAGGGTCACTTCGCGCCCCAGGGCGGCCGCGCCTCGTACGTGCGCGTCGACGGCCAGGTCTGCCAGCTGGTCCTGGTGA ACAAGGGGCCGGACGGCATCCCGGTCGAGGAGCGCACCGACGTCCCGCGTGCCCACGGCGACGCCCTGCTGGACGTCTGC CCCGGCAAGGCCGCCTACGACCGCACCACCCTGAATGCCGGCGGGCGCGAGATCGCCATCGACCGCTACGTCACCCCCGG CAGCCTGGACCTGATCAGCGTCGCCTTCGACAATGACGGCGAGGCCGCCGGCTTCCATGCCCCGAGCTGGTTCGGCCGCG AGGTCAGCAACGAGCCGGCCTTCGAGCGGGCGGCGCTGGCCATCCAGGGCGTGCCGGCCGCCGAGGAGGTGGCGCTGAGC AACGCCGCGCTGGACGCGGTGCTGGACCTGATCGAGCCCCGGTTCGGCTTCGGCCGCTACGGCAGCAGCAGCCGGACCAC CGAGTCCGACGAGGGCGCGATGGGCGCCATGCGCCGGGCCGCGGCCCCGGCGGCTCCGGCCGCCGCAGCGCCGGTCGTCG CGGCCCCGCCGCCGGCTCCGGAGCCCGCCGCCTCCGCCCCGCGCCCGCCCGAGCCGGCCCCGGAGCATCACCCCGAGCCC GAGCCGCAGCCGGAGCCCGCGCCGGAAGCGGCCGCGCACGCCGCGCCGGCCGCCGAGACGCCCGCCCCGCAGGGCGGCAC CGGCGACGCCCTGCACGGGGATGCCCGCATCGACGACGTCATCGAGAGCCTGTCGCAGGCGCTCGGCGCGGCGATCCACC AGCAGCCCGATCCCGCCGCCGAGAACAAGGACGGGAAGAGCGATGATCCCGCCTCGATGTTCGAGCGCTGGACCGTCCGC CCCCGCCGGACCCAGCAGCAGACCTGA
Upstream 100 bases:
>100_bases CGGGTCGGCTCCACGTGCCCCCTTCCGTGCGGCCCGGCGGCGCTGAGGGCTGTCCGCCGGATCGGCGCACCGCCGACCAA GCGGGAGGGGTTTTGAGTTC
Downstream 100 bases:
>100_bases CGCGCGGCGCGCCCCGCGGCGCAACGACGCGAGACACGGCCGGGCCGCAGCGCAGACCGCGCTGCGGCCCGTCTGCTTTC GCGGGTCCGCGGCTCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSTVRRFLVAPSLVRLIRKERGGARITEGHFAPQGGRASYVRVDGQVCQLVLVNKGPDGIPVEERTDVPRAHGDALLDVC PGKAAYDRTTLNAGGREIAIDRYVTPGSLDLISVAFDNDGEAAGFHAPSWFGREVSNEPAFERAALAIQGVPAAEEVALS NAALDAVLDLIEPRFGFGRYGSSSRTTESDEGAMGAMRRAAAPAAPAAAAPVVAAPPPAPEPAASAPRPPEPAPEHHPEP EPQPEPAPEAAAHAAPAAETPAPQGGTGDALHGDARIDDVIESLSQALGAAIHQQPDPAAENKDGKSDDPASMFERWTVR PRRTQQQT
Sequences:
>Translated_328_residues MSTVRRFLVAPSLVRLIRKERGGARITEGHFAPQGGRASYVRVDGQVCQLVLVNKGPDGIPVEERTDVPRAHGDALLDVC PGKAAYDRTTLNAGGREIAIDRYVTPGSLDLISVAFDNDGEAAGFHAPSWFGREVSNEPAFERAALAIQGVPAAEEVALS NAALDAVLDLIEPRFGFGRYGSSSRTTESDEGAMGAMRRAAAPAAPAAAAPVVAAPPPAPEPAASAPRPPEPAPEHHPEP EPQPEPAPEAAAHAAPAAETPAPQGGTGDALHGDARIDDVIESLSQALGAAIHQQPDPAAENKDGKSDDPASMFERWTVR PRRTQQQT >Mature_327_residues STVRRFLVAPSLVRLIRKERGGARITEGHFAPQGGRASYVRVDGQVCQLVLVNKGPDGIPVEERTDVPRAHGDALLDVCP GKAAYDRTTLNAGGREIAIDRYVTPGSLDLISVAFDNDGEAAGFHAPSWFGREVSNEPAFERAALAIQGVPAAEEVALSN AALDAVLDLIEPRFGFGRYGSSSRTTESDEGAMGAMRRAAAPAAPAAAAPVVAAPPPAPEPAASAPRPPEPAPEHHPEPE PQPEPAPEAAAHAAPAAETPAPQGGTGDALHGDARIDDVIESLSQALGAAIHQQPDPAAENKDGKSDDPASMFERWTVRP RRTQQQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34307; Mature: 34176
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVRRFLVAPSLVRLIRKERGGARITEGHFAPQGGRASYVRVDGQVCQLVLVNKGPDGI CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCC PVEERTDVPRAHGDALLDVCPGKAAYDRTTLNAGGREIAIDRYVTPGSLDLISVAFDNDG CCCCCCCCCCCCCCEEEEECCCCCHHCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCC EAAGFHAPSWFGREVSNEPAFERAALAIQGVPAAEEVALSNAALDAVLDLIEPRFGFGRY CCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GSSSRTTESDEGAMGAMRRAAAPAAPAAAAPVVAAPPPAPEPAASAPRPPEPAPEHHPEP CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC EPQPEPAPEAAAHAAPAAETPAPQGGTGDALHGDARIDDVIESLSQALGAAIHQQPDPAA CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ENKDGKSDDPASMFERWTVRPRRTQQQT CCCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STVRRFLVAPSLVRLIRKERGGARITEGHFAPQGGRASYVRVDGQVCQLVLVNKGPDGI HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCC PVEERTDVPRAHGDALLDVCPGKAAYDRTTLNAGGREIAIDRYVTPGSLDLISVAFDNDG CCCCCCCCCCCCCCEEEEECCCCCHHCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCC EAAGFHAPSWFGREVSNEPAFERAALAIQGVPAAEEVALSNAALDAVLDLIEPRFGFGRY CCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GSSSRTTESDEGAMGAMRRAAAPAAPAAAAPVVAAPPPAPEPAASAPRPPEPAPEHHPEP CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC EPQPEPAPEAAAHAAPAAETPAPQGGTGDALHGDARIDDVIESLSQALGAAIHQQPDPAA CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC ENKDGKSDDPASMFERWTVRPRRTQQQT CCCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA