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The map label for this gene is recO [H]

Identifier: 170748446

GI number: 170748446

Start: 2157367

End: 2158086

Strand: Reverse

Name: recO [H]

Synonym: Mrad2831_2028

Alternate gene names: 170748446

Gene position: 2158086-2157367 (Counterclockwise)

Preceding gene: 170748449

Following gene: 170748445

Centisome position: 35.51

GC content: 74.03

Gene sequence:

>720_bases
ATGCAGTGGACCGACGACGCCCTGGTGCTCGGCCTGCGCCGGCACGGGGAGACCGGCGTCATCCTCGAGGCCATGACCGA
GGCCCACGGGCGCCACCTCGGCCTCGTGCACGGCGGACGCTCGCGCCGGATGCAGCCCGTTCTGCAGGCCGGGAACCGCG
TCCGCCTGACGTGGCGGGCGCGCCTCGACGAGGGTCTCGGCTCCTACGCGGTGGAGCCCCTGGACTCGCAGGTCTCGCGG
CTGATCGGGTCGAGCCTCGCCCTCTACGGCATGAACCACATGGCCGCCCTGCTGCGTCTCCTCCCCGAGCGCGACCCGCA
TCCGGCGCTCTACGAGGCGGCGGGAATCCTCGTCGAGCACCTCGACGACCCCGCCGTCGCCCCGCCTCTGATGGTGCGGT
TCGAGCTGGCGATCCTGTCGGAGCTCGGCTTCGGCCTCGACCTCACCGCCTGCGCGGCCACCGGCGGCAACGACGCCCTG
GCCTACGTGTCGCCGAAGAGCGGCCGGGCGGTCAGCGCCTCGGCGGGCGAGCCCTACCGGGACCGCCTGCTGGCGCTCCC
GACCTTCCTGCACGCGGGCGGGTCCCCCGGTCCCGACGGCGTTGCCCAAGGGTTTACCTTGACGGGATACTTCCTCGACC
GGCACGTCTGGGGTCCGCGCGGCCTCGGGCCGCCCGAGGAGCGGGCGCGATTCGTTGCGCTCGGCCGCGAGGCCGGGTAA

Upstream 100 bases:

>100_bases
GCACCGCGCGGGGCAGCGCCGACCGCCGCGGCTCCCTATATGAGAGGCAGGCGCGGAGCGCACCGCTCACCCGATCTCTC
ACACGAAGACGCGACGTTCG

Downstream 100 bases:

>100_bases
TGTTCGCGTTCTGTTCCGAACACGTCCGGGCTTGAGCGCCGCTCGAGCCGGAACGACCAAACCCGTCATTCCGGGGCCGC
GGAGCGGAGCCCGGAATCCA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRARLDEGLGSYAVEPLDSQVSR
LIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEHLDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDAL
AYVSPKSGRAVSASAGEPYRDRLLALPTFLHAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVALGREAG

Sequences:

>Translated_239_residues
MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRARLDEGLGSYAVEPLDSQVSR
LIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEHLDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDAL
AYVSPKSGRAVSASAGEPYRDRLLALPTFLHAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVALGREAG
>Mature_239_residues
MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRARLDEGLGSYAVEPLDSQVSR
LIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEHLDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDAL
AYVSPKSGRAVSASAGEPYRDRLLALPTFLHAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVALGREAG

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 25595; Mature: 25595

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRA
CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEE
RLDEGLGSYAVEPLDSQVSRLIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEH
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDALAYVSPKSGRAVSASAGEPYR
CCCCCCCCHHHHHHHHHHHHHCCCCCEEHEEECCCCCCEEEEECCCCCCEEECCCCCCHH
DRLLALPTFLHAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVALGREAG
HHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHEEEEECCCCC
>Mature Secondary Structure
MQWTDDALVLGLRRHGETGVILEAMTEAHGRHLGLVHGGRSRRMQPVLQAGNRVRLTWRA
CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCEEEEEEEE
RLDEGLGSYAVEPLDSQVSRLIGSSLALYGMNHMAALLRLLPERDPHPALYEAAGILVEH
CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LDDPAVAPPLMVRFELAILSELGFGLDLTACAATGGNDALAYVSPKSGRAVSASAGEPYR
CCCCCCCCHHHHHHHHHHHHHCCCCCEEHEEECCCCCCEEEEECCCCCCEEECCCCCCHH
DRLLALPTFLHAGGSPGPDGVAQGFTLTGYFLDRHVWGPRGLGPPEERARFVALGREAG
HHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA