| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747098
Identifier: 170747098
GI number: 170747098
Start: 709588
End: 711135
Strand: Reverse
Name: 170747098
Synonym: Mrad2831_0664
Alternate gene names: NA
Gene position: 711135-709588 (Counterclockwise)
Preceding gene: 170747099
Following gene: 170747095
Centisome position: 11.7
GC content: 72.35
Gene sequence:
>1548_bases ATGAACCTCGCGGGGATGCGGACCTACCGCGCGGACGAGGTCGTCGACGCGGTCGTGGTGGGGACCGGCGCGGGCGGCGC GCCGCTCCTCGCGCGCCTCGCCGCTTCGGGGCTGAAGGTCGTGGCCCTGGAGGCCGGACCGAACTTCACGCCGGAGCGCT TCGCCTTCGACGAGACGCTCGCGGACGAGATCTACTGGACCGAGGAGCGGCTGAGCGGCGGCTCGACTCCGGAAGCCTTC GGGGCGAACAACAGCGGCACCGGCGTCGGCGGCTCGACGCTGCACTGGGGCGCTTTCGTGCCCCGGGCCGACGCCCGCGA CCTGCGTCTGCACACGGAGTCGGGGGAAGGTGTCGACTGGCCGCTGACCTACGAGGACCTGCTCCCGTTCTACGAGCGGG TCGAGCGGTTCCTCGGCGTCTCGGGCGCGCAGAGCTACCCGTGGGATGCCGACCGCCGCTATCCCCTGCCCCCGGTCCCG CGCAACGGTCCGGCGCAGATCATGGCCCGGGCCTGCGAGGCCCGCGGCATCCGTTGGGCGGACGCGCCCGCCGCCGTGGT CTCGCGGGACTTCCAGTCCGAGGACGGACCGCGCCGCAACGCCTGCATCAATTGCGGCTTCTGCCACCAGGGCTGCCGCA CGGGCGCCAAGGCCAGCATGGACGTGACCTACCTGCCCTACGCGGTCGCCCGCGGCGCCGAGATCCGGGCCGAGGCCTTC GTCCACGGCCTGGAGCGCGGCGCCGACGGCCGGATCACCGGCGTGGTCTACCGGCAGGACGGCGCGGAGCGGCGGCAGCG CTGCGGCGCGGTCTTCCTCTGCGCCGGGGCCGTGGAGACGCCGCGCCTGTTGCTCCATCTCGGGCTCGCCAATTCCAGCG GCCAGATCGGGCGCAACTACATGGGCCACGTGGCGACGCAGGTCTGGGGTACCTTCGACCACGAGGTGCGCATGAACCGG GGCTACCCGTCCTCGCTGATCACCGAGGACTTCGTCCGCGCCGGCGCCGACTTCGCGGGCGGCTACCTGATCCAGAGCCT CGGCGTGGTGCCGGTGACCTTCGGCAACTCGGCGGCGCGGGGGCGCGGCCTGTGGGGGCAGCCGCTCCTCGACTACCTCG ACCGCTACAACCACCTCGCCGGCATCGGCATCAACGGCGAGACGCTGCCCTGCGACGCCAACGTGCTGACCCTCGCCGAC GAGACCGACGCGCACGGGATGCGCAAGGCCCAGATCAGCTTCGGCTACAGCACCAATGAGAACCGCCTCAACGCGCACGC CACGAAGGTCATGCGCGGACTCTGGGAGGAGGCGGGGGCGGACGACATCTGGGTGCTGGAGCGCGTCGCCCACACCCTCG GAACCTGTCGGATGGGCCGCGACGGCTCGAGCGCCGTGGTCGACCCGCACGGCCGCAGCTTCGACATCGACAACCTGTGG ATCTGCGACGGCTCGACCTTCCCGAGTTCGCTCGCGGCGAACCCGGCCCTGACCATCATGGCGCTCAGCCTGCGCAGCGC GGAGGCGTTCCTGGCCGGCGGCCCCTGA
Upstream 100 bases:
>100_bases GGCCGGGCGAGATCGCCGACGACCTGCCGGGCTTCCGCGCCGTCGGGCTCGACGCGCCGGAACCCTGGGAGCCACGGGCG CTGCGGACGGAGGCGGGACG
Downstream 100 bases:
>100_bases GTCGGCTCAGCCCGCGGCGACGCGCAGGTCCGCGAGCCCGCGCCGCTGGCGACCCGCCCCGTCGAAGTTCGACGGGTCCA GCCACGCCGCGAAGCCGGCG
Product: gluconate 2-dehydrogenase (acceptor)
Products: NA
Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MNLAGMRTYRADEVVDAVVVGTGAGGAPLLARLAASGLKVVALEAGPNFTPERFAFDETLADEIYWTEERLSGGSTPEAF GANNSGTGVGGSTLHWGAFVPRADARDLRLHTESGEGVDWPLTYEDLLPFYERVERFLGVSGAQSYPWDADRRYPLPPVP RNGPAQIMARACEARGIRWADAPAAVVSRDFQSEDGPRRNACINCGFCHQGCRTGAKASMDVTYLPYAVARGAEIRAEAF VHGLERGADGRITGVVYRQDGAERRQRCGAVFLCAGAVETPRLLLHLGLANSSGQIGRNYMGHVATQVWGTFDHEVRMNR GYPSSLITEDFVRAGADFAGGYLIQSLGVVPVTFGNSAARGRGLWGQPLLDYLDRYNHLAGIGINGETLPCDANVLTLAD ETDAHGMRKAQISFGYSTNENRLNAHATKVMRGLWEEAGADDIWVLERVAHTLGTCRMGRDGSSAVVDPHGRSFDIDNLW ICDGSTFPSSLAANPALTIMALSLRSAEAFLAGGP
Sequences:
>Translated_515_residues MNLAGMRTYRADEVVDAVVVGTGAGGAPLLARLAASGLKVVALEAGPNFTPERFAFDETLADEIYWTEERLSGGSTPEAF GANNSGTGVGGSTLHWGAFVPRADARDLRLHTESGEGVDWPLTYEDLLPFYERVERFLGVSGAQSYPWDADRRYPLPPVP RNGPAQIMARACEARGIRWADAPAAVVSRDFQSEDGPRRNACINCGFCHQGCRTGAKASMDVTYLPYAVARGAEIRAEAF VHGLERGADGRITGVVYRQDGAERRQRCGAVFLCAGAVETPRLLLHLGLANSSGQIGRNYMGHVATQVWGTFDHEVRMNR GYPSSLITEDFVRAGADFAGGYLIQSLGVVPVTFGNSAARGRGLWGQPLLDYLDRYNHLAGIGINGETLPCDANVLTLAD ETDAHGMRKAQISFGYSTNENRLNAHATKVMRGLWEEAGADDIWVLERVAHTLGTCRMGRDGSSAVVDPHGRSFDIDNLW ICDGSTFPSSLAANPALTIMALSLRSAEAFLAGGP >Mature_515_residues MNLAGMRTYRADEVVDAVVVGTGAGGAPLLARLAASGLKVVALEAGPNFTPERFAFDETLADEIYWTEERLSGGSTPEAF GANNSGTGVGGSTLHWGAFVPRADARDLRLHTESGEGVDWPLTYEDLLPFYERVERFLGVSGAQSYPWDADRRYPLPPVP RNGPAQIMARACEARGIRWADAPAAVVSRDFQSEDGPRRNACINCGFCHQGCRTGAKASMDVTYLPYAVARGAEIRAEAF VHGLERGADGRITGVVYRQDGAERRQRCGAVFLCAGAVETPRLLLHLGLANSSGQIGRNYMGHVATQVWGTFDHEVRMNR GYPSSLITEDFVRAGADFAGGYLIQSLGVVPVTFGNSAARGRGLWGQPLLDYLDRYNHLAGIGINGETLPCDANVLTLAD ETDAHGMRKAQISFGYSTNENRLNAHATKVMRGLWEEAGADDIWVLERVAHTLGTCRMGRDGSSAVVDPHGRSFDIDNLW ICDGSTFPSSLAANPALTIMALSLRSAEAFLAGGP
Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GMC oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000172 - InterPro: IPR007867 [H]
Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]
EC number: =1.1.99.3 [H]
Molecular weight: Translated: 55370; Mature: 55370
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAGMRTYRADEVVDAVVVGTGAGGAPLLARLAASGLKVVALEAGPNFTPERFAFDETL CCCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH ADEIYWTEERLSGGSTPEAFGANNSGTGVGGSTLHWGAFVPRADARDLRLHTESGEGVDW HHHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCC PLTYEDLLPFYERVERFLGVSGAQSYPWDADRRYPLPPVPRNGPAQIMARACEARGIRWA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC DAPAAVVSRDFQSEDGPRRNACINCGFCHQGCRTGAKASMDVTYLPYAVARGAEIRAEAF CCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCEEEECCHHHHCCCCHHHHHH VHGLERGADGRITGVVYRQDGAERRQRCGAVFLCAGAVETPRLLLHLGLANSSGQIGRNY HHHHHCCCCCCEEEEEECCCCHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHH MGHVATQVWGTFDHEVRMNRGYPSSLITEDFVRAGADFAGGYLIQSLGVVPVTFGNSAAR HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHCHHHHHHCCCEEEECCCCCCC GRGLWGQPLLDYLDRYNHLAGIGINGETLPCDANVLTLADETDAHGMRKAQISFGYSTNE CCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCC NRLNAHATKVMRGLWEEAGADDIWVLERVAHTLGTCRMGRDGSSAVVDPHGRSFDIDNLW CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEECCCEEE ICDGSTFPSSLAANPALTIMALSLRSAEAFLAGGP EECCCCCCHHHCCCCCEEEEEEEHHCCCCEECCCC >Mature Secondary Structure MNLAGMRTYRADEVVDAVVVGTGAGGAPLLARLAASGLKVVALEAGPNFTPERFAFDETL CCCCCCCCCCHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH ADEIYWTEERLSGGSTPEAFGANNSGTGVGGSTLHWGAFVPRADARDLRLHTESGEGVDW HHHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCC PLTYEDLLPFYERVERFLGVSGAQSYPWDADRRYPLPPVPRNGPAQIMARACEARGIRWA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC DAPAAVVSRDFQSEDGPRRNACINCGFCHQGCRTGAKASMDVTYLPYAVARGAEIRAEAF CCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCEEEECCHHHHCCCCHHHHHH VHGLERGADGRITGVVYRQDGAERRQRCGAVFLCAGAVETPRLLLHLGLANSSGQIGRNY HHHHHCCCCCCEEEEEECCCCHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHH MGHVATQVWGTFDHEVRMNRGYPSSLITEDFVRAGADFAGGYLIQSLGVVPVTFGNSAAR HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHCHHHHHHCCCEEEECCCCCCC GRGLWGQPLLDYLDRYNHLAGIGINGETLPCDANVLTLADETDAHGMRKAQISFGYSTNE CCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCC NRLNAHATKVMRGLWEEAGADDIWVLERVAHTLGTCRMGRDGSSAVVDPHGRSFDIDNLW CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEECCCEEE ICDGSTFPSSLAANPALTIMALSLRSAEAFLAGGP EECCCCCCHHHCCCCCEEEEEEEHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9352901 [H]