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The map label for this gene is atpH

Identifier: 170747040

GI number: 170747040

Start: 649700

End: 650272

Strand: Reverse

Name: atpH

Synonym: Mrad2831_0606

Alternate gene names: 170747040

Gene position: 650272-649700 (Counterclockwise)

Preceding gene: 170747041

Following gene: 170747039

Centisome position: 10.7

GC content: 69.81

Gene sequence:

>573_bases
GTGGCGCAGAACGGTTCCGAGGCTGGTCCCCTGGTCGCAGGCGTGGCGGGCCGGTACGCTTCCGCCCTGTTCGAACTCGC
GCGCGACGAGCGCCAGGTCGACGCGGTCGCCGAGTCCCTCAATCAATTCGATGGGCTGCTGAAGGAGAGCGCGGATCTCC
GCCGCCTCGTCCGCAGCCCGGTCTTCAGCGCCGAGGAGCAGGAGGCCGCGATCGGCGCCGTGCTCGACAAGGCCGGGATC
GGCGGCCTGGCCGGAAACTTCATCCGCCTCGCGGCCTCGAACCGCCGGCTCTTCGCGCTCCCCGACATGATCGACGCGTT
CCGGGCCCTGGTCCAGGACTCGAAGGGCATCGTCCGGGCCCAGGTGCGCGTGGCCGAGAGGCCGTCCGACGCGGTGATCG
AGGAGATCAAGGCGTCGCTGCGCGACATCGCCAAGGCCGACGTCGACGTCGACCTCGTGGTCGACCCGAGCCTGATCGGC
GGCCTCGTCGTGAAGATGGGCTCGCGCATGGTCGACGCCTCTCTCAAGACCAAGCTCAACGGTATCCGCCTCGCGATGCG
GGCCGCGCGATAA

Upstream 100 bases:

>100_bases
CCTGTCCGCTGTCGGCGCGATCCCACGTCCCGAACGGTCTCGCACCGCGCTCCAGCCGGAGCGCGCGGAGCGGGCGGGCA
ACCAGAGAAGAGAGCGACGG

Downstream 100 bases:

>100_bases
GCGCCCCCATCCGAACCGAACACGCATAGACGCATCAGCGACAGAGGCCCGAGTATGGACATCCGCGCCGCCGAGATCTC
CGCGATCCTGAAAGACCAGA

Product: ATP synthase F1 subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MAQNGSEAGPLVAGVAGRYASALFELARDERQVDAVAESLNQFDGLLKESADLRRLVRSPVFSAEEQEAAIGAVLDKAGI
GGLAGNFIRLAASNRRLFALPDMIDAFRALVQDSKGIVRAQVRVAERPSDAVIEEIKASLRDIAKADVDVDLVVDPSLIG
GLVVKMGSRMVDASLKTKLNGIRLAMRAAR

Sequences:

>Translated_190_residues
MAQNGSEAGPLVAGVAGRYASALFELARDERQVDAVAESLNQFDGLLKESADLRRLVRSPVFSAEEQEAAIGAVLDKAGI
GGLAGNFIRLAASNRRLFALPDMIDAFRALVQDSKGIVRAQVRVAERPSDAVIEEIKASLRDIAKADVDVDLVVDPSLIG
GLVVKMGSRMVDASLKTKLNGIRLAMRAAR
>Mature_189_residues
AQNGSEAGPLVAGVAGRYASALFELARDERQVDAVAESLNQFDGLLKESADLRRLVRSPVFSAEEQEAAIGAVLDKAGIG
GLAGNFIRLAASNRRLFALPDMIDAFRALVQDSKGIVRAQVRVAERPSDAVIEEIKASLRDIAKADVDVDLVVDPSLIGG
LVVKMGSRMVDASLKTKLNGIRLAMRAAR

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Homo sapiens, GI4502303, Length=178, Percent_Identity=29.2134831460674, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71984710, Length=180, Percent_Identity=30.5555555555556, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71984717, Length=180, Percent_Identity=30.5555555555556, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320504, Length=178, Percent_Identity=27.5280898876405, Blast_Score=71, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24647054, Length=171, Percent_Identity=30.9941520467836, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_METRJ (B1LVH2)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001753300.1
- ProteinModelPortal:   B1LVH2
- SMR:   B1LVH2
- GeneID:   6136620
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_0606
- HOGENOM:   HBG668108
- OMA:   SIGDKYV
- ProtClustDB:   CLSK2330689
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20213; Mature: 20081

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNGSEAGPLVAGVAGRYASALFELARDERQVDAVAESLNQFDGLLKESADLRRLVRSP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
VFSAEEQEAAIGAVLDKAGIGGLAGNFIRLAASNRRLFALPDMIDAFRALVQDSKGIVRA
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEEEECHHHHHHHHHHHHCCCCHHHH
QVRVAERPSDAVIEEIKASLRDIAKADVDVDLVVDPSLIGGLVVKMGSRMVDASLKTKLN
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHH
GIRLAMRAAR
HHHHHHHHCC
>Mature Secondary Structure 
AQNGSEAGPLVAGVAGRYASALFELARDERQVDAVAESLNQFDGLLKESADLRRLVRSP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
VFSAEEQEAAIGAVLDKAGIGGLAGNFIRLAASNRRLFALPDMIDAFRALVQDSKGIVRA
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEEEECHHHHHHHHHHHHCCCCHHHH
QVRVAERPSDAVIEEIKASLRDIAKADVDVDLVVDPSLIGGLVVKMGSRMVDASLKTKLN
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHH
GIRLAMRAAR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA