| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747018
Identifier: 170747018
GI number: 170747018
Start: 630024
End: 631463
Strand: Reverse
Name: 170747018
Synonym: Mrad2831_0584
Alternate gene names: NA
Gene position: 631463-630024 (Counterclockwise)
Preceding gene: 170747019
Following gene: 170747017
Centisome position: 10.39
GC content: 67.57
Gene sequence:
>1440_bases ATGGCGGTGACGGCCTTCGACGAGATGAACGGACTCGGCACCGGCGCCGCCGATCCGGCCGCCGTTCGCGACGCCTACGG CCAGCTCAAGGCGTGGCTGGACTCGACGCCGCCGGAGCACTTCAACACCCGCCGCAGCCAGGCCGAGCTGCTGTTCCGCC GGATCGGCATCACCTTCGCGGTCTACGGCGACAACGAATCGACCGAGCGGCTGATCCCGTTCGACATCATCCCCCGGGTG ATCACCAAGCCGGAATGGGCCTTCCTGGAGCGCGGGCTGACGCAGCGGGTCACGGCCATCAACCTGTTCCTGAAGGACAT CTACGGCGCCCAGGAATGCATCAAGGCCGGCATCATCCCGGCCGACCTCGTCTACCGCAACGCCCATTACCGCATGGAGA TGCGGTCCTTCCGCGTGCCGCACGACCTCTACGTCCACATCGCGGGCATCGACATCGTCCGGACCGGCGAGAACGACTTC TTCGTGCTGGAGGACAACGCCCGCATCCCTTCGGGAGTCTCCTACATGCTGGAGAACCGGGAGGTGATGCTGCGCCTGTT CCCGGACCTGTTCTCGAAGCACCGGGTCGCGCCGGTGGAGAACTACCCGGACGCCCTGCTCGCCACGCTGCGCAGCCTCG CGCCGGGCTCGGCGACCCGCGACCCGACCGTCGTGCTCCTGACCCCCGGGCGCTACAATTCCGCGTTCTACGAGCACTCG TTCCTGGCCGACAAGCTCGGCGTCGAGCTGGTGGAGGCGTCCGACCTCTTCACCAAGGACGACGTCGTCTACATGCGCAC CACCGAGGGGCCGCGGAAGGTCGACGTGATCTACCGCCGCCTCGACGACGACTTCCTCGACCCGCTGGTCTTCCGCCCGG ATTCGGTCCTCGGCGTGCCGGGGCTGATGAACGCCTACGAGCGCGGCTCGGTGACCCTCGCCAACGCGGTCGGGACCGGC ATCTCGGACGATAAGGCGGTCTACAGCTACATGCCCGAGATCGTGAAGTTCTTCACCGGCGAGGAGTCGATCCTGCACAA CGTGCCGACCTACCGCTGCCGCGAGAAGGACGCCTTCGCGTACGTGATGGACAACCTGTCCGACCTGGTGGTGAAGGAGG TCAACGGCTCGGGCGGCTACGGGATGCTGGTCGGGCCGCACGCCAGCAAGCGCGAGCTCGACGACTTCGCCAAGAAGCTC AAGCACGCCCCGGACGGGTTCATCGCCCAGCCGACCCTGTCGCTCTCCACCTGCCCGACCTTCGTGGCCTCGGGCGTCGC GCCCCGCCACGTCGACCTGCGGCCCTTCGTGCTGTGCGGGGCCGACAAGATCCGCATCGTCCCGGGCGGCCTGACCCGGG TGGCGCTGAAGGAAGGCTCCCTGGTGGTCAATTCCAGCCAGGGCGGTGGCACGAAGGACACCTGGGTGCTCGACGCCTGA
Upstream 100 bases:
>100_bases CTGATCCTCCGGCCGCCTTGAGCGTTATCGCCCGCGGATATAGCCATGAACAGGTGGCGCGCCTCTTGCCTCAAGAGCGG GAGCGTACGGGAGGAGCGAG
Downstream 100 bases:
>100_bases GGTCCAGGCCGTCCCGACGTTCCGAGGCGCGGACATTGTGGTCCGCACGACTTGGCTGAAGACCGATGCTCTCCAGGACT GCCGACAACCTCTTCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAVTAFDEMNGLGTGAADPAAVRDAYGQLKAWLDSTPPEHFNTRRSQAELLFRRIGITFAVYGDNESTERLIPFDIIPRV ITKPEWAFLERGLTQRVTAINLFLKDIYGAQECIKAGIIPADLVYRNAHYRMEMRSFRVPHDLYVHIAGIDIVRTGENDF FVLEDNARIPSGVSYMLENREVMLRLFPDLFSKHRVAPVENYPDALLATLRSLAPGSATRDPTVVLLTPGRYNSAFYEHS FLADKLGVELVEASDLFTKDDVVYMRTTEGPRKVDVIYRRLDDDFLDPLVFRPDSVLGVPGLMNAYERGSVTLANAVGTG ISDDKAVYSYMPEIVKFFTGEESILHNVPTYRCREKDAFAYVMDNLSDLVVKEVNGSGGYGMLVGPHASKRELDDFAKKL KHAPDGFIAQPTLSLSTCPTFVASGVAPRHVDLRPFVLCGADKIRIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDA
Sequences:
>Translated_479_residues MAVTAFDEMNGLGTGAADPAAVRDAYGQLKAWLDSTPPEHFNTRRSQAELLFRRIGITFAVYGDNESTERLIPFDIIPRV ITKPEWAFLERGLTQRVTAINLFLKDIYGAQECIKAGIIPADLVYRNAHYRMEMRSFRVPHDLYVHIAGIDIVRTGENDF FVLEDNARIPSGVSYMLENREVMLRLFPDLFSKHRVAPVENYPDALLATLRSLAPGSATRDPTVVLLTPGRYNSAFYEHS FLADKLGVELVEASDLFTKDDVVYMRTTEGPRKVDVIYRRLDDDFLDPLVFRPDSVLGVPGLMNAYERGSVTLANAVGTG ISDDKAVYSYMPEIVKFFTGEESILHNVPTYRCREKDAFAYVMDNLSDLVVKEVNGSGGYGMLVGPHASKRELDDFAKKL KHAPDGFIAQPTLSLSTCPTFVASGVAPRHVDLRPFVLCGADKIRIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDA >Mature_478_residues AVTAFDEMNGLGTGAADPAAVRDAYGQLKAWLDSTPPEHFNTRRSQAELLFRRIGITFAVYGDNESTERLIPFDIIPRVI TKPEWAFLERGLTQRVTAINLFLKDIYGAQECIKAGIIPADLVYRNAHYRMEMRSFRVPHDLYVHIAGIDIVRTGENDFF VLEDNARIPSGVSYMLENREVMLRLFPDLFSKHRVAPVENYPDALLATLRSLAPGSATRDPTVVLLTPGRYNSAFYEHSF LADKLGVELVEASDLFTKDDVVYMRTTEGPRKVDVIYRRLDDDFLDPLVFRPDSVLGVPGLMNAYERGSVTLANAVGTGI SDDKAVYSYMPEIVKFFTGEESILHNVPTYRCREKDAFAYVMDNLSDLVVKEVNGSGGYGMLVGPHASKRELDDFAKKLK HAPDGFIAQPTLSLSTCPTFVASGVAPRHVDLRPFVLCGADKIRIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDA
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 53080; Mature: 52949
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTAFDEMNGLGTGAADPAAVRDAYGQLKAWLDSTPPEHFNTRRSQAELLFRRIGITFA CEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCEEEE VYGDNESTERLIPFDIIPRVITKPEWAFLERGLTQRVTAINLFLKDIYGAQECIKAGIIP EECCCCCCCEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCC ADLVYRNAHYRMEMRSFRVPHDLYVHIAGIDIVRTGENDFFVLEDNARIPSGVSYMLENR HHHHEECCHHEEHHHHHCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCCH EVMLRLFPDLFSKHRVAPVENYPDALLATLRSLAPGSATRDPTVVLLTPGRYNSAFYEHS HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHH FLADKLGVELVEASDLFTKDDVVYMRTTEGPRKVDVIYRRLDDDFLDPLVFRPDSVLGVP HHHHHHCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCHHHHCCEEECCCCCCCCC GLMNAYERGSVTLANAVGTGISDDKAVYSYMPEIVKFFTGEESILHNVPTYRCREKDAFA HHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCHHH YVMDNLSDLVVKEVNGSGGYGMLVGPHASKRELDDFAKKLKHAPDGFIAQPTLSLSTCPT HHHHCHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHCHH FVASGVAPRHVDLRPFVLCGADKIRIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDA HHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC >Mature Secondary Structure AVTAFDEMNGLGTGAADPAAVRDAYGQLKAWLDSTPPEHFNTRRSQAELLFRRIGITFA EEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCEEEE VYGDNESTERLIPFDIIPRVITKPEWAFLERGLTQRVTAINLFLKDIYGAQECIKAGIIP EECCCCCCCEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCC ADLVYRNAHYRMEMRSFRVPHDLYVHIAGIDIVRTGENDFFVLEDNARIPSGVSYMLENR HHHHEECCHHEEHHHHHCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCCH EVMLRLFPDLFSKHRVAPVENYPDALLATLRSLAPGSATRDPTVVLLTPGRYNSAFYEHS HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHH FLADKLGVELVEASDLFTKDDVVYMRTTEGPRKVDVIYRRLDDDFLDPLVFRPDSVLGVP HHHHHHCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCHHHHCCEEECCCCCCCCC GLMNAYERGSVTLANAVGTGISDDKAVYSYMPEIVKFFTGEESILHNVPTYRCREKDAFA HHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCHHH YVMDNLSDLVVKEVNGSGGYGMLVGPHASKRELDDFAKKLKHAPDGFIAQPTLSLSTCPT HHHHCHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHCHH FVASGVAPRHVDLRPFVLCGADKIRIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDA HHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]