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The map label for this gene is radC [C]

Identifier: 170747019

GI number: 170747019

Start: 631560

End: 632306

Strand: Reverse

Name: radC [C]

Synonym: Mrad2831_0585

Alternate gene names: 170747019

Gene position: 632306-631560 (Counterclockwise)

Preceding gene: 170747020

Following gene: 170747018

Centisome position: 10.4

GC content: 72.56

Gene sequence:

>747_bases
GTGTCGCCGCGGCCGGACGACGGTGAGGCGGGGCTGTTCGCCGACAGCGCCGCCCCGTCCCCGGTCGAGAAGGAGGCGCC
GCACTACCACGGCCATCGCGACCGCCTGCGGGAGAAGTTCGCGACGGCGGGGGCCGACGCGCTGCCCGATTACGAGCTGC
TGGAGCTGGTCCTGTTCCGGGCGATACCCCGGCGGGACGTCAAGCCCCTCGCCAAGGCGCTGGTCGCCCGGTTCGGCAGC
TTCGCCGAGGTAGTCAGCGCCGAGCCGGCGCGGCTGATGGAAGTGGAGGGCGTGAGCGCCGGGGTCGCGTCCGACCTCAA
GGTGATCGAGGCCGCGGCGCGGCGGCTCGCCCGGGGCGCGATCCGGGAGCGCGCGCTCCTGGGCTCGTGGAGCGCGCTGC
ACGAGTACCTGCGCGCCACCATGGCGTTCGCCCCGCGCGAGGAGTTCCGCGTCCTGTTCCTCGACAAGCGCAACCACCTC
ATCGCCGACGAGGTGCAGGGACGCGGCACCGTCGACCACACGCCTGTCTATCCGCGCGAAGTCGCCCGCCGGGCGCTCGA
ACTGTCGGCCACGGCCATCATCCTGGCCCACAACCACCCGTCCGGCGACCCGGCCCCCTCCGCGGCCGACGTGGCGATGA
CCCGCGAGATCGTGGCGGTCCTGGCGCCGCTCAAGATCGTCGTCCACGACCACGTGATCCTCGGCCGAAACGGTCACGCC
AGCCTGAAAGGCCTCAAGCTGATCTGA

Upstream 100 bases:

>100_bases
GTTCGAGCACACGGTCGGCGTCACCGAGACCGGCGTCGAGATCTTCACGATCTCGCCGAAGGGGCTGCATCAGCCCGTCA
ACCCGGCCGCCTGACCGGCC

Downstream 100 bases:

>100_bases
TCCTCCGGCCGCCTTGAGCGTTATCGCCCGCGGATATAGCCATGAACAGGTGGCGCGCCTCTTGCCTCAAGAGCGGGAGC
GTACGGGAGGAGCGAGATGG

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSPRPDDGEAGLFADSAAPSPVEKEAPHYHGHRDRLREKFATAGADALPDYELLELVLFRAIPRRDVKPLAKALVARFGS
FAEVVSAEPARLMEVEGVSAGVASDLKVIEAAARRLARGAIRERALLGSWSALHEYLRATMAFAPREEFRVLFLDKRNHL
IADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADVAMTREIVAVLAPLKIVVHDHVILGRNGHA
SLKGLKLI

Sequences:

>Translated_248_residues
MSPRPDDGEAGLFADSAAPSPVEKEAPHYHGHRDRLREKFATAGADALPDYELLELVLFRAIPRRDVKPLAKALVARFGS
FAEVVSAEPARLMEVEGVSAGVASDLKVIEAAARRLARGAIRERALLGSWSALHEYLRATMAFAPREEFRVLFLDKRNHL
IADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADVAMTREIVAVLAPLKIVVHDHVILGRNGHA
SLKGLKLI
>Mature_247_residues
SPRPDDGEAGLFADSAAPSPVEKEAPHYHGHRDRLREKFATAGADALPDYELLELVLFRAIPRRDVKPLAKALVARFGSF
AEVVSAEPARLMEVEGVSAGVASDLKVIEAAARRLARGAIRERALLGSWSALHEYLRATMAFAPREEFRVLFLDKRNHLI
ADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADVAMTREIVAVLAPLKIVVHDHVILGRNGHAS
LKGLKLI

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI87082300, Length=206, Percent_Identity=36.4077669902913, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI2367100, Length=132, Percent_Identity=47.7272727272727, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788997, Length=107, Percent_Identity=47.6635514018692, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1788312, Length=109, Percent_Identity=49.5412844036697, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 26949; Mature: 26818

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRPDDGEAGLFADSAAPSPVEKEAPHYHGHRDRLREKFATAGADALPDYELLELVLFR
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AIPRRDVKPLAKALVARFGSFAEVVSAEPARLMEVEGVSAGVASDLKVIEAAARRLARGA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
IRERALLGSWSALHEYLRATMAFAPREEFRVLFLDKRNHLIADEVQGRGTVDHTPVYPRE
HHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHCCCCCCCCCCCCCHHH
VARRALELSATAIILAHNHPSGDPAPSAADVAMTREIVAVLAPLKIVVHDHVILGRNGHA
HHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
SLKGLKLI
CCCCCCCC
>Mature Secondary Structure 
SPRPDDGEAGLFADSAAPSPVEKEAPHYHGHRDRLREKFATAGADALPDYELLELVLFR
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AIPRRDVKPLAKALVARFGSFAEVVSAEPARLMEVEGVSAGVASDLKVIEAAARRLARGA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
IRERALLGSWSALHEYLRATMAFAPREEFRVLFLDKRNHLIADEVQGRGTVDHTPVYPRE
HHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHCCCCCCCCCCCCCHHH
VARRALELSATAIILAHNHPSGDPAPSAADVAMTREIVAVLAPLKIVVHDHVILGRNGHA
HHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC
SLKGLKLI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA