| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is lhr [C]
Identifier: 170746973
GI number: 170746973
Start: 577405
End: 579960
Strand: Reverse
Name: lhr [C]
Synonym: Mrad2831_0539
Alternate gene names: 170746973
Gene position: 579960-577405 (Counterclockwise)
Preceding gene: 170746974
Following gene: 170746972
Centisome position: 9.54
GC content: 71.28
Gene sequence:
>2556_bases GTGGCGCCGACCGGGGCCGGCAAGACGCTGGCCGGCTTCCTGCCGAGTCTCGTCGACCTCGCCGAGCGCGGGCCGCAGAA GAAGGCGGCGGGCCTCCACACCCTCTACGTCTCGCCCCTGAAGGCGCTGGCGGTGGACATTGCCCGCAACCTCGACGCGC CGATCGCCGAGATGGCGCTGCCGGTGCGCGTCGAGACCCGCACCGGTGACACGCCGGCCCACAAGCGCACCCGCCAGATC AGCCGGCCGCCGGACATCCTTCTGACCACGCCCGAGCAGCTGGCCCTGCTGATCGCCCACCGCGAGGCGGCTGAGTTTTT TGCCGGGTTGCGCTGCGTGGTGCTCGACGAGCTGCACGCGCTGGTCACCTCGAAGCGCGGCGACCTGCTGGCGCTGGCGC TGGCGCGGTTGCACCGGCTGAGCCCGGGACTGGCGGCGATCGGGCTTTCCGCGACGGTGCGGGAGCCGGACGAGCTGCGG AAGTACCTGGTGCCGCAGGGGCCGCTCCCCCCTCCTCCCTCTGCGAGCGGGCAACCGGGATCGCATCGCGACGAGGGTCA TACGGCTGCCGAACATGACGGGGACCCCCTTGCCGGTGCAGGAGTGGGAAAGGGTGAGGGCCGGAGCCTTCCGGGAGGAG GCTCGGCCTCCTCGCGACTTTCTCCCGCACGGGAGAGGGCCCCCGTCGAGACGCCCATGGCCGAACTCGTCACGGTGGCC GGCGGCGCGAAGGCGGATCTTCGCATGCTCGACCTCGGCCGGGCGCTGCCGATCTCCGGCCACACGGCCTGGCACTCGAT GCCGGCGATCTACGAGCTCATCAAGGAACACCGGACCACGCTTGTCTTCGTGAACACCCGGCTCCAGGCCGAGTACACGT TCCAGGAGCTGTGGCGGCTCAACGAGGACGCGCTGCCGATCGCGATCCACCACGGCTCGCTCGATGCCCAGCAGCGCCGC CGGGTCGAGGCCGCCATGGCGGCAGGGCAGCTCCGCGCGATCGTCTGCACCGCAACCCTCGACCTCGGCATCGACTGGGG CGACGTCGACCTCGTGGTCAATGTCGGCGCGCCGAAGGGGGCGAGCCGGATCATGCAGCGGATCGGCCGCGCCAACCACC GCATGGACGAGCCCTCGAAGGCCTACCTCGTCCCGGGCAACCGCTTCGAGATGCTGGAGTGCCAGGCGGCGCTGGACGCC GTCGAGGAGGCCGCGCAGGACACGCCCGACGCCCGCCAGGGCGCCCTCGACGTCCTCGCCCAGCACGTGCTCGGCATGGC CTGCGCCGACGCCTTCGACCCGCTCGAGCTCTACGACGAGATCGTCTCGGCCGCGCCCTACGCCGGTCTCTCCTGGGAAG CGTTCGAGCAGGTCGTCGACTACGTCGCGACCGGCGGCTACGCGCTGCGCGCCTACGAGCGGTTCGCGAAGATCCTGCGC GGGCCGGACGGGCTCTGGCGCGTCCGCGACGCCCGCACCGCGCAGGCCTACCGGATGAATGTCGGCACCATCGTGGAGGC GGCGCGGGTGAAGGTCCGGCTCGGCCGGACCCTGCGCGGCAAGCCCGGCACGGTGTTGCCGAAGACCGGCCGGGTGCTCG GCGAGATCGAGGACGAGTTCGCCGAGACGCTCACCGTCGGCGACACGTTCCTGTTCGCGGGCGAGACCCTGCGGTTCGAG GGGCTCTCCGAGGACGAGTGCCTCGTCACCCGCGCGCCGGCCGGCACCGATCCGGCGATCCCGTCCTACGCGGGCGCAAA GTTCCCGCTCTCGACCTTCCTGGCCGCGCGGGTCCGGGCGCTCATCGCCGACCCGTTCGCGTGGGACCGGCTGCCGAAGC AGATCGGCGAGTACCTGCTGCAGCAGCGCCGACGCTCGGTCCTGCCGGGCGAGCGCGACCTCCTCGTGGAGACGTTCCCG CGGGGCAAGCGCTTCTACCTGACCGCCTTCCCGTTCGAGGGCCGCCTCGCCCACCAGACGCTGGGCATGCTGCTGACCCG GCGCCTGGAGCGCGCCGGCCTGCGGCCACTCGGCTTCGCGGCCAACGATTACGGCATCGCCATCTGGTCGACCCGCGACG TCTCGGAGCGCGCCGCGATCGATCCGGACTTCATCGGCGACCTGTTCGCGGTCGACATGCTGGGCGACGACCTCGAGGCG TGGCTCGACGAATCCGCCATGATGAAGCGCACGTTCCGCCAGTGCGCGGTGATCGCCGGCCTGATCGAGCGCCACCATCC GGGTCAGAAGAAGTCCGGCCGGCAGGTCACGATCTCGACCGACCTGATCTACGACGTGCTGCGCAAGCACCAGCCCGACC ACCTCCTGCTGCGGGCGGCGCGGCAGGATGCGGCAACCGGACTCCTCGACGTGAGGCGCCTCGGCATGATGCTAGAGCGC ATCCAGGGGCGAATCATCCACAGGTCTCTCGACCGGGTCTCGCCACTCTCCGTGTCCGTGATGCTCGAGATCGGGCGCGA GCGGGTCTACGGCGAGGGCGCCGACGAGATCCTGGCCGAGGCCGAGGCGGAGCTTCTCCAAGAGGCTCTGTCCTGA
Upstream 100 bases:
>100_bases GGAAGGATTCCGCGCCTGGTTCGCGGGCCGCGGCTGGGCGCCCCGGTCGCACCAGCTCGATCTCCTGCGGATCGCCGGCG CCGGCCGCTCGGCGCTGCTG
Downstream 100 bases:
>100_bases CCGCCGATCCGCCCTTCCCCGACGACACCGAGGATGCGATCTTGGCGGCCGGCCTGAGACTCGAGAAGACTCACAAGCAC CCCACCCTGCTTCTCGCGGG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MAPTGAGKTLAGFLPSLVDLAERGPQKKAAGLHTLYVSPLKALAVDIARNLDAPIAEMALPVRVETRTGDTPAHKRTRQI SRPPDILLTTPEQLALLIAHREAAEFFAGLRCVVLDELHALVTSKRGDLLALALARLHRLSPGLAAIGLSATVREPDELR KYLVPQGPLPPPPSASGQPGSHRDEGHTAAEHDGDPLAGAGVGKGEGRSLPGGGSASSRLSPARERAPVETPMAELVTVA GGAKADLRMLDLGRALPISGHTAWHSMPAIYELIKEHRTTLVFVNTRLQAEYTFQELWRLNEDALPIAIHHGSLDAQQRR RVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNVGAPKGASRIMQRIGRANHRMDEPSKAYLVPGNRFEMLECQAALDA VEEAAQDTPDARQGALDVLAQHVLGMACADAFDPLELYDEIVSAAPYAGLSWEAFEQVVDYVATGGYALRAYERFAKILR GPDGLWRVRDARTAQAYRMNVGTIVEAARVKVRLGRTLRGKPGTVLPKTGRVLGEIEDEFAETLTVGDTFLFAGETLRFE GLSEDECLVTRAPAGTDPAIPSYAGAKFPLSTFLAARVRALIADPFAWDRLPKQIGEYLLQQRRRSVLPGERDLLVETFP RGKRFYLTAFPFEGRLAHQTLGMLLTRRLERAGLRPLGFAANDYGIAIWSTRDVSERAAIDPDFIGDLFAVDMLGDDLEA WLDESAMMKRTFRQCAVIAGLIERHHPGQKKSGRQVTISTDLIYDVLRKHQPDHLLLRAARQDAATGLLDVRRLGMMLER IQGRIIHRSLDRVSPLSVSVMLEIGRERVYGEGADEILAEAEAELLQEALS
Sequences:
>Translated_851_residues MAPTGAGKTLAGFLPSLVDLAERGPQKKAAGLHTLYVSPLKALAVDIARNLDAPIAEMALPVRVETRTGDTPAHKRTRQI SRPPDILLTTPEQLALLIAHREAAEFFAGLRCVVLDELHALVTSKRGDLLALALARLHRLSPGLAAIGLSATVREPDELR KYLVPQGPLPPPPSASGQPGSHRDEGHTAAEHDGDPLAGAGVGKGEGRSLPGGGSASSRLSPARERAPVETPMAELVTVA GGAKADLRMLDLGRALPISGHTAWHSMPAIYELIKEHRTTLVFVNTRLQAEYTFQELWRLNEDALPIAIHHGSLDAQQRR RVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNVGAPKGASRIMQRIGRANHRMDEPSKAYLVPGNRFEMLECQAALDA VEEAAQDTPDARQGALDVLAQHVLGMACADAFDPLELYDEIVSAAPYAGLSWEAFEQVVDYVATGGYALRAYERFAKILR GPDGLWRVRDARTAQAYRMNVGTIVEAARVKVRLGRTLRGKPGTVLPKTGRVLGEIEDEFAETLTVGDTFLFAGETLRFE GLSEDECLVTRAPAGTDPAIPSYAGAKFPLSTFLAARVRALIADPFAWDRLPKQIGEYLLQQRRRSVLPGERDLLVETFP RGKRFYLTAFPFEGRLAHQTLGMLLTRRLERAGLRPLGFAANDYGIAIWSTRDVSERAAIDPDFIGDLFAVDMLGDDLEA WLDESAMMKRTFRQCAVIAGLIERHHPGQKKSGRQVTISTDLIYDVLRKHQPDHLLLRAARQDAATGLLDVRRLGMMLER IQGRIIHRSLDRVSPLSVSVMLEIGRERVYGEGADEILAEAEAELLQEALS >Mature_850_residues APTGAGKTLAGFLPSLVDLAERGPQKKAAGLHTLYVSPLKALAVDIARNLDAPIAEMALPVRVETRTGDTPAHKRTRQIS RPPDILLTTPEQLALLIAHREAAEFFAGLRCVVLDELHALVTSKRGDLLALALARLHRLSPGLAAIGLSATVREPDELRK YLVPQGPLPPPPSASGQPGSHRDEGHTAAEHDGDPLAGAGVGKGEGRSLPGGGSASSRLSPARERAPVETPMAELVTVAG GAKADLRMLDLGRALPISGHTAWHSMPAIYELIKEHRTTLVFVNTRLQAEYTFQELWRLNEDALPIAIHHGSLDAQQRRR VEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNVGAPKGASRIMQRIGRANHRMDEPSKAYLVPGNRFEMLECQAALDAV EEAAQDTPDARQGALDVLAQHVLGMACADAFDPLELYDEIVSAAPYAGLSWEAFEQVVDYVATGGYALRAYERFAKILRG PDGLWRVRDARTAQAYRMNVGTIVEAARVKVRLGRTLRGKPGTVLPKTGRVLGEIEDEFAETLTVGDTFLFAGETLRFEG LSEDECLVTRAPAGTDPAIPSYAGAKFPLSTFLAARVRALIADPFAWDRLPKQIGEYLLQQRRRSVLPGERDLLVETFPR GKRFYLTAFPFEGRLAHQTLGMLLTRRLERAGLRPLGFAANDYGIAIWSTRDVSERAAIDPDFIGDLFAVDMLGDDLEAW LDESAMMKRTFRQCAVIAGLIERHHPGQKKSGRQVTISTDLIYDVLRKHQPDHLLLRAARQDAATGLLDVRRLGMMLERI QGRIIHRSLDRVSPLSVSVMLEIGRERVYGEGADEILAEAEAELLQEALS
Specific function: Unknown
COG id: COG1201
COG function: function code R; Lhr-like helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787942, Length=932, Percent_Identity=26.7167381974249, Blast_Score=223, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR013701 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR017170 [H]
Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]
EC number: 3.6.1.-
Molecular weight: Translated: 92809; Mature: 92677
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTGAGKTLAGFLPSLVDLAERGPQKKAAGLHTLYVSPLKALAVDIARNLDAPIAEMAL CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCC PVRVETRTGDTPAHKRTRQISRPPDILLTTPEQLALLIAHREAAEFFAGLRCVVLDELHA CEEEECCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LVTSKRGDLLALALARLHRLSPGLAAIGLSATVREPDELRKYLVPQGPLPPPPSASGQPG HHHCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC SHRDEGHTAAEHDGDPLAGAGVGKGEGRSLPGGGSASSRLSPARERAPVETPMAELVTVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHC GGAKADLRMLDLGRALPISGHTAWHSMPAIYELIKEHRTTLVFVNTRLQAEYTFQELWRL CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCC NEDALPIAIHHGSLDAQQRRRVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNVGAPKG CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCCC ASRIMQRIGRANHRMDEPSKAYLVPGNRFEMLECQAALDAVEEAAQDTPDARQGALDVLA HHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QHVLGMACADAFDPLELYDEIVSAAPYAGLSWEAFEQVVDYVATGGYALRAYERFAKILR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GPDGLWRVRDARTAQAYRMNVGTIVEAARVKVRLGRTLRGKPGTVLPKTGRVLGEIEDEF CCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH AETLTVGDTFLFAGETLRFEGLSEDECLVTRAPAGTDPAIPSYAGAKFPLSTFLAARVRA HHHHHCCCEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH LIADPFAWDRLPKQIGEYLLQQRRRSVLPGERDLLVETFPRGKRFYLTAFPFEGRLAHQT HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCEEEEEECCCCCCHHHHH LGMLLTRRLERAGLRPLGFAANDYGIAIWSTRDVSERAAIDPDFIGDLFAVDMLGDDLEA HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHCCHHHH WLDESAMMKRTFRQCAVIAGLIERHHPGQKKSGRQVTISTDLIYDVLRKHQPDHLLLRAA HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHH RQDAATGLLDVRRLGMMLERIQGRIIHRSLDRVSPLSVSVMLEIGRERVYGEGADEILAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AEAELLQEALS HHHHHHHHHHC >Mature Secondary Structure APTGAGKTLAGFLPSLVDLAERGPQKKAAGLHTLYVSPLKALAVDIARNLDAPIAEMAL CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCC PVRVETRTGDTPAHKRTRQISRPPDILLTTPEQLALLIAHREAAEFFAGLRCVVLDELHA CEEEECCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LVTSKRGDLLALALARLHRLSPGLAAIGLSATVREPDELRKYLVPQGPLPPPPSASGQPG HHHCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC SHRDEGHTAAEHDGDPLAGAGVGKGEGRSLPGGGSASSRLSPARERAPVETPMAELVTVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHC GGAKADLRMLDLGRALPISGHTAWHSMPAIYELIKEHRTTLVFVNTRLQAEYTFQELWRL CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCC NEDALPIAIHHGSLDAQQRRRVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNVGAPKG CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEEEECCCCCC ASRIMQRIGRANHRMDEPSKAYLVPGNRFEMLECQAALDAVEEAAQDTPDARQGALDVLA HHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QHVLGMACADAFDPLELYDEIVSAAPYAGLSWEAFEQVVDYVATGGYALRAYERFAKILR HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GPDGLWRVRDARTAQAYRMNVGTIVEAARVKVRLGRTLRGKPGTVLPKTGRVLGEIEDEF CCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH AETLTVGDTFLFAGETLRFEGLSEDECLVTRAPAGTDPAIPSYAGAKFPLSTFLAARVRA HHHHHCCCEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH LIADPFAWDRLPKQIGEYLLQQRRRSVLPGERDLLVETFPRGKRFYLTAFPFEGRLAHQT HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCEEEEEECCCCCCHHHHH LGMLLTRRLERAGLRPLGFAANDYGIAIWSTRDVSERAAIDPDFIGDLFAVDMLGDDLEA HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHCCHHHH WLDESAMMKRTFRQCAVIAGLIERHHPGQKKSGRQVTISTDLIYDVLRKHQPDHLLLRAA HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHH RQDAATGLLDVRRLGMMLERIQGRIIHRSLDRVSPLSVSVMLEIGRERVYGEGADEILAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AEAELLQEALS HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on acid anhydrides [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8899719; 11427726 [H]