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The map label for this gene is virR [H]

Identifier: 170746887

GI number: 170746887

Start: 489364

End: 489861

Strand: Reverse

Name: virR [H]

Synonym: Mrad2831_0453

Alternate gene names: 170746887

Gene position: 489861-489364 (Counterclockwise)

Preceding gene: 170746909

Following gene: 170746886

Centisome position: 8.06

GC content: 72.49

Gene sequence:

>498_bases
ATGGACGCGGATGAGTTCGGGACCCGTCCCGGTGAAGTGAGGGCCGCGCTGCCCGCGACCTTCGACGCGGGCATCCACTT
CATCGGTCGGCTGCGGACGCCCTGGCTGACGCGGTCCGACTGTCCCAAGAACGGGCTCCAGACGGACACGGTCTGCACCG
TGGAGGTCGATCCGGCCTACGCCCCCGCCCTGCGCAATGTCACGGGCTGCACGCACCTGATCCTGCTCTACTGGATGGAC
CGGGCGACGCGCGGCCTCGTGGTCCAGCGTCCGCGCCACGCCGACGGCCCTCGCGGCACCTTCTCGTTGCGCTCGCCCGC
GCGTCCCAACCCGATCGCCCTGTCCGTCGTGGAACTGCTCGGCCGCGACGGCGACGCGCTCCGCGTGCGCGGGCTCGACT
GCCTCGACGGCACGCCGCTCCTCGACATCAAGCCCTACTACGCCACCACGGACGCGCGGCCGGACGCCCAGGTCGACCGA
GCCGGGGCCGAGCCGTGA

Upstream 100 bases:

>100_bases
CTGCTGCCGGATCTACACCCCGCGCCATCCGGGGGCGAGATGCGGGGTTGCGGGCCGCGAACACATGGCCGACAAGCCGG
CCGGCGCGGAGCGAGGCGGC

Downstream 100 bases:

>100_bases
AGCGCGCCGTCCTCCTCGGTCTCGGCGGGCTCGCCCTGCTGGCGATCGGCGGGTTCGCCGGGTGGCGCCTGCATCGGCCA
GGGGCCGACGCGCGGGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDADEFGTRPGEVRAALPATFDAGIHFIGRLRTPWLTRSDCPKNGLQTDTVCTVEVDPAYAPALRNVTGCTHLILLYWMD
RATRGLVVQRPRHADGPRGTFSLRSPARPNPIALSVVELLGRDGDALRVRGLDCLDGTPLLDIKPYYATTDARPDAQVDR
AGAEP

Sequences:

>Translated_165_residues
MDADEFGTRPGEVRAALPATFDAGIHFIGRLRTPWLTRSDCPKNGLQTDTVCTVEVDPAYAPALRNVTGCTHLILLYWMD
RATRGLVVQRPRHADGPRGTFSLRSPARPNPIALSVVELLGRDGDALRVRGLDCLDGTPLLDIKPYYATTDARPDAQVDR
AGAEP
>Mature_165_residues
MDADEFGTRPGEVRAALPATFDAGIHFIGRLRTPWLTRSDCPKNGLQTDTVCTVEVDPAYAPALRNVTGCTHLILLYWMD
RATRGLVVQRPRHADGPRGTFSLRSPARPNPIALSVVELLGRDGDALRVRGLDCLDGTPLLDIKPYYATTDARPDAQVDR
AGAEP

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Escherichia coli, GI1786393, Length=149, Percent_Identity=33.5570469798658, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 17992; Mature: 17992

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADEFGTRPGEVRAALPATFDAGIHFIGRLRTPWLTRSDCPKNGLQTDTVCTVEVDPAY
CCCCHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
APALRNVTGCTHLILLYWMDRATRGLVVQRPRHADGPRGTFSLRSPARPNPIALSVVELL
CHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
GRDGDALRVRGLDCLDGTPLLDIKPYYATTDARPDAQVDRAGAEP
CCCCCEEEEECCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDADEFGTRPGEVRAALPATFDAGIHFIGRLRTPWLTRSDCPKNGLQTDTVCTVEVDPAY
CCCCHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
APALRNVTGCTHLILLYWMDRATRGLVVQRPRHADGPRGTFSLRSPARPNPIALSVVELL
CHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
GRDGDALRVRGLDCLDGTPLLDIKPYYATTDARPDAQVDRAGAEP
CCCCCEEEEECCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA