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The map label for this gene is yqgF [C]

Identifier: 170746909

GI number: 170746909

Start: 511194

End: 511706

Strand: Reverse

Name: yqgF [C]

Synonym: Mrad2831_0475

Alternate gene names: 170746909

Gene position: 511706-511194 (Counterclockwise)

Preceding gene: 170746910

Following gene: 170746887

Centisome position: 8.42

GC content: 71.93

Gene sequence:

>513_bases
ATGAACTTCGACGCGATCCGCGCCTTCGCGGCCGAATCCCGCGGCGGCGCCCGCCTGATCGGCATCGATCTCGGCACCAA
AACGATCGGGCTCGCCCTGTCGGATCTCGGCCGCCAGATCGCGACACCGCTTGAGACCATCCGCCGGGTGAAGTTCACCC
CCGACGCGCAGCGGCTCGCCGCCCTGTGCCGGCAGCACGCGGTCGGCGGCCTCGTGGTCGGACTGCCGCTCAACATGGAC
GGCAGTGAGGGGCCGCGGGTGCAGTCGACCCGCGCCTTCATGCGCAACCTCGCGCCGATCCTCCCCCTGCCCCACGTCTT
CTTCGACGAGCGCCTCTCGACCGCCGTGGTCACCCGCGCGCTGATCGAGGCCGACGCCTCGCGGGCGCGGCGCGGCCAGC
TCGTCGACAAGCTCGCCGCCGCCTACATCCTCCAGGGCTGCCTCGACGTCATGCGCAACCTCGCGGACGCCGACGCGGAC
GACGACACCGAGGACGGGTCCCTCAGCCGCTGA

Upstream 100 bases:

>100_bases
CGTCCGCGGCGCTGGTCCTGGGACCGGGTTCGGAGCCCCTCCCCGCCCGCTTCGAGGGCGTCACCGAGGTCACCCTCGCG
CGCGCCGCGCAGGCGGAGTC

Downstream 100 bases:

>100_bases
TCAGAGAGACGGTGCCACTGCCGTGGCGCTCGATCCGTCCGTCGAGCTCCAATTCCAGCAGCACGCTCTGCACGATCCGG
GCACCGACCCCGGCGCTCCG

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNFDAIRAFAAESRGGARLIGIDLGTKTIGLALSDLGRQIATPLETIRRVKFTPDAQRLAALCRQHAVGGLVVGLPLNMD
GSEGPRVQSTRAFMRNLAPILPLPHVFFDERLSTAVVTRALIEADASRARRGQLVDKLAAAYILQGCLDVMRNLADADAD
DDTEDGSLSR

Sequences:

>Translated_170_residues
MNFDAIRAFAAESRGGARLIGIDLGTKTIGLALSDLGRQIATPLETIRRVKFTPDAQRLAALCRQHAVGGLVVGLPLNMD
GSEGPRVQSTRAFMRNLAPILPLPHVFFDERLSTAVVTRALIEADASRARRGQLVDKLAAAYILQGCLDVMRNLADADAD
DDTEDGSLSR
>Mature_170_residues
MNFDAIRAFAAESRGGARLIGIDLGTKTIGLALSDLGRQIATPLETIRRVKFTPDAQRLAALCRQHAVGGLVVGLPLNMD
GSEGPRVQSTRAFMRNLAPILPLPHVFFDERLSTAVVTRALIEADASRARRGQLVDKLAAAYILQGCLDVMRNLADADAD
DDTEDGSLSR

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=131, Percent_Identity=33.587786259542, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 18282; Mature: 18282

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDAIRAFAAESRGGARLIGIDLGTKTIGLALSDLGRQIATPLETIRRVKFTPDAQRLA
CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALCRQHAVGGLVVGLPLNMDGSEGPRVQSTRAFMRNLAPILPLPHVFFDERLSTAVVTRA
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LIEADASRARRGQLVDKLAAAYILQGCLDVMRNLADADADDDTEDGSLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNFDAIRAFAAESRGGARLIGIDLGTKTIGLALSDLGRQIATPLETIRRVKFTPDAQRLA
CCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALCRQHAVGGLVVGLPLNMDGSEGPRVQSTRAFMRNLAPILPLPHVFFDERLSTAVVTRA
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LIEADASRARRGQLVDKLAAAYILQGCLDVMRNLADADADDDTEDGSLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA