Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is puuB [H]
Identifier: 170746803
GI number: 170746803
Start: 391941
End: 393230
Strand: Reverse
Name: puuB [H]
Synonym: Mrad2831_0357
Alternate gene names: 170746803
Gene position: 393230-391941 (Counterclockwise)
Preceding gene: 170746804
Following gene: 170746800
Centisome position: 6.47
GC content: 73.02
Gene sequence:
>1290_bases GTGGCCGAACCGTTCCCGCTCGCACCCTCGCTCTGGGCCACCACGGCGGCGCCCGCGCCGGACACGCCGCCCCTCGCCAG ATCAGGCTTGGCCGAGGTGGTGATCGTCGGCGGCGGGTTCTGCGGCCTCTCCACCGCCCTGCATCTCGCCGAGCGCGGCA TCCGACCCGTCGTGCTCGAGGCGCAGGAGGTCGGCTACGGCGGGTCCGGTCGCAACGGTGGCCAGGTCATCCCGGGCCTC AAATACGATCCCGCCGACCTCGTCGCGCGGTTCGGTCGGGAGCGCGGCGAGCGGCTCGCGCGCTTCGCCGGCGGGACCGC CGACGTCGTGTTCGATCTCATCGCCCGGCACGGGATGGACGTGCCGCACCGCCGCTCCGGCTGGATCCAGGGCGCCCATA CCGAGGCCGGGCTCGCCGAGGTCGCGAAGCGGGCGGCCCAGTGGGCGGAGCTCGGGGCCCCGACCCGCGTCCTCGACCGG GCCGAGACCGAGCAGCTGCTGGGGACCGACCGCTATCTCGGCGGCTGGCTCGACGGCCGCGGCGGGGCGATCCAGCCCCT GAGCTACGCCCGCGGCCTCGCCCGGGCTGCCCAGAAGGCCGGCGCCATAATCCACGGCGCGTCGCCTGTCACCGCCCTCG AACGGACCGGGTCGGGCTGGACGGTCACGACGGCCCAGGGCGAGCGGGTGACGACCGGCCGGGTCGTTCTGTGCACCAAC GGCTACACGGGCGGGCTCTGGCCGAACCTCGCGCGGACGGTGATCGCGGCGAATTCGTTCCAGGTCGCGACGGTGCCGCT GACGGACAACCTGCGGCGCTCGATCCTGCCCGAAGGTCACGTCTCCTCGGACACGCGGAAGCTCCTGCTCTACTTCCGCC TCGACCATACCGGCCGCCTGCTGATGGGCGGACGCGGGCCGTTCCGGGAGCCGCGCAGCCCCGCCGACTGGGCGCATCTC GAGCGGATCGTGGCCAAGCTCTTCCCGCAGCTGGACGGGATCGCCTTCGACCATCGCTGGTGCGGCCGGGTCGCGATCAC CCGGGACTACCTGCCCCATCTCCACGAGCCGGCGCCCGGGCTGCTCATCGATATCGGCTGCCAGGGTCGGGGCGTCGGCC TGCAGTCGGCGATGGGCCGGGCGATGGCCACCTACATCGCCACCGGGGATGCCGGCAGCCTGCCTTTGCCGCTCACGCCG ATCGAGCCGCTTCCGCTTCACGGTCTCAATCGGCTGTACGTCTCGGCGATCATCGCGTGGTACCGCCTGCGTGACGGAGG CATTCGCTGA
Upstream 100 bases:
>100_bases TCGTCGAGCAGGGACCGGCCGCCGAAGTCCTCAACCGGCCGCAGAACCCGCGCACCCGGGACTTCCTGCAGCGCGTGCTG CACCCGCTCTAGGACAAGCC
Downstream 100 bases:
>100_bases TCGGTCCGGCGCGCCGTCGAACGCGCCGTCACCGCGGGTGCCACAGCGCCGCGCTGAGGCCCAGAGCGGCGGGGCCAGAG CGACGGCGCCAGGGCGAGGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MAEPFPLAPSLWATTAAPAPDTPPLARSGLAEVVIVGGGFCGLSTALHLAERGIRPVVLEAQEVGYGGSGRNGGQVIPGL KYDPADLVARFGRERGERLARFAGGTADVVFDLIARHGMDVPHRRSGWIQGAHTEAGLAEVAKRAAQWAELGAPTRVLDR AETEQLLGTDRYLGGWLDGRGGAIQPLSYARGLARAAQKAGAIIHGASPVTALERTGSGWTVTTAQGERVTTGRVVLCTN GYTGGLWPNLARTVIAANSFQVATVPLTDNLRRSILPEGHVSSDTRKLLLYFRLDHTGRLLMGGRGPFREPRSPADWAHL ERIVAKLFPQLDGIAFDHRWCGRVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQSAMGRAMATYIATGDAGSLPLPLTP IEPLPLHGLNRLYVSAIIAWYRLRDGGIR
Sequences:
>Translated_429_residues MAEPFPLAPSLWATTAAPAPDTPPLARSGLAEVVIVGGGFCGLSTALHLAERGIRPVVLEAQEVGYGGSGRNGGQVIPGL KYDPADLVARFGRERGERLARFAGGTADVVFDLIARHGMDVPHRRSGWIQGAHTEAGLAEVAKRAAQWAELGAPTRVLDR AETEQLLGTDRYLGGWLDGRGGAIQPLSYARGLARAAQKAGAIIHGASPVTALERTGSGWTVTTAQGERVTTGRVVLCTN GYTGGLWPNLARTVIAANSFQVATVPLTDNLRRSILPEGHVSSDTRKLLLYFRLDHTGRLLMGGRGPFREPRSPADWAHL ERIVAKLFPQLDGIAFDHRWCGRVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQSAMGRAMATYIATGDAGSLPLPLTP IEPLPLHGLNRLYVSAIIAWYRLRDGGIR >Mature_428_residues AEPFPLAPSLWATTAAPAPDTPPLARSGLAEVVIVGGGFCGLSTALHLAERGIRPVVLEAQEVGYGGSGRNGGQVIPGLK YDPADLVARFGRERGERLARFAGGTADVVFDLIARHGMDVPHRRSGWIQGAHTEAGLAEVAKRAAQWAELGAPTRVLDRA ETEQLLGTDRYLGGWLDGRGGAIQPLSYARGLARAAQKAGAIIHGASPVTALERTGSGWTVTTAQGERVTTGRVVLCTNG YTGGLWPNLARTVIAANSFQVATVPLTDNLRRSILPEGHVSSDTRKLLLYFRLDHTGRLLMGGRGPFREPRSPADWAHLE RIVAKLFPQLDGIAFDHRWCGRVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQSAMGRAMATYIATGDAGSLPLPLTPI EPLPLHGLNRLYVSAIIAWYRLRDGGIR
Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24797151, Length=221, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1787559, Length=424, Percent_Identity=32.5471698113208, Blast_Score=182, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45819; Mature: 45688
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPFPLAPSLWATTAAPAPDTPPLARSGLAEVVIVGGGFCGLSTALHLAERGIRPVVLE CCCCCCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEE AQEVGYGGSGRNGGQVIPGLKYDPADLVARFGRERGERLARFAGGTADVVFDLIARHGMD HHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC VPHRRSGWIQGAHTEAGLAEVAKRAAQWAELGAPTRVLDRAETEQLLGTDRYLGGWLDGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCC GGAIQPLSYARGLARAAQKAGAIIHGASPVTALERTGSGWTVTTAQGERVTTGRVVLCTN CCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEECCCCEEECCEEEEEEC GYTGGLWPNLARTVIAANSFQVATVPLTDNLRRSILPEGHVSSDTRKLLLYFRLDHTGRL CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEE LMGGRGPFREPRSPADWAHLERIVAKLFPQLDGIAFDHRWCGRVAITRDYLPHLHEPAPG EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEHHHHHHCCCCCCC LLIDIGCQGRGVGLQSAMGRAMATYIATGDAGSLPLPLTPIEPLPLHGLNRLYVSAIIAW EEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH YRLRDGGIR HHHCCCCCC >Mature Secondary Structure AEPFPLAPSLWATTAAPAPDTPPLARSGLAEVVIVGGGFCGLSTALHLAERGIRPVVLE CCCCCCCCCHHHCCCCCCCCCCCHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEE AQEVGYGGSGRNGGQVIPGLKYDPADLVARFGRERGERLARFAGGTADVVFDLIARHGMD HHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC VPHRRSGWIQGAHTEAGLAEVAKRAAQWAELGAPTRVLDRAETEQLLGTDRYLGGWLDGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCC GGAIQPLSYARGLARAAQKAGAIIHGASPVTALERTGSGWTVTTAQGERVTTGRVVLCTN CCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEECCCCEEECCEEEEEEC GYTGGLWPNLARTVIAANSFQVATVPLTDNLRRSILPEGHVSSDTRKLLLYFRLDHTGRL CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEE LMGGRGPFREPRSPADWAHLERIVAKLFPQLDGIAFDHRWCGRVAITRDYLPHLHEPAPG EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEHHHHHHCCCCCCC LLIDIGCQGRGVGLQSAMGRAMATYIATGDAGSLPLPLTPIEPLPLHGLNRLYVSAIIAW EEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH YRLRDGGIR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1840553; 7984428 [H]