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The map label for this gene is ydiF [H]

Identifier: 170746800

GI number: 170746800

Start: 388817

End: 390799

Strand: Reverse

Name: ydiF [H]

Synonym: Mrad2831_0354

Alternate gene names: 170746800

Gene position: 390799-388817 (Counterclockwise)

Preceding gene: 170746803

Following gene: 170746798

Centisome position: 6.43

GC content: 66.97

Gene sequence:

>1983_bases
ATGAGGAAGAACAAGGTCATCTCGGCGGAAGAGGCGATCGCGCTGATCCGCAAGAACGACGTCGTGACCACCACGGGGTT
TGTCCAGAGCTGCATCCCGGAGGCCCTGCACGCCGCCCTCGAGAAGCGGTTCGTCGAGACCGGATCGCCGCGCGGCCTCA
CCCTGATCATGACGGCGGGCGCCGGCGACAGCAAAGGGCTCGGCACCGGCCGCCTGCACCATGACGGCCTCCTTTCGCGG
GTCATCGCGGCCAATTTCGGCCGCATGCCGAAGGTGGCCAAGGCCGCCCAGGACAATCTGATCCGCGGCTACAACCTGCC
CCAGGGCGTGATCTCCCAGCTCTATCGGGCCTGCGCGGCGGGGCAGCCGGGCCTGTTCTCGAAGGTCGGCCTGAAGACCT
ATGTCGACCCGCGACACGGGGGCGCCAAGGTCAACGAGCTGACCACCGAGGACATCGTCAAACTCGTCGAGGTCGATGGC
GAGGAGTGGCTGTTCTACACGGCGACCAAGATCGACGTCGCCTTCATCCGCGCCACCTCGGCCGACCCGTCGGGCAATCT
CTCCTACGAGAAGGAGGCGCTGACCCTGGACTGCCTCGCCCAGGCCATGGCGGCCCGAAACAACGGCGGCATCGTCATCG
CCCAAGTCGAGCGCATCGTCGACGACGGCTACCTCCTGCCGAAGGACGTGCGTGTCCCCGGCATTCTCGTCGACTGCGTT
GTGGTGGCCGAGCCCGAGATGCACCGGATGAACTACGGCGTGATGCACGACGCCGCGCTGGCCGGCGAGATCCGGGTCCC
GGTCACCGGCATCAAGCGGATGGCGCTGAACGAGCGCAAGATCATCGCGCGCCGCGCTGCCTTCGAGCTGCCGCCGAACG
GCGTAGTCAATCTCGGCGTCGGCGCGCCCGAGGGGATCTCATCGGTCGCCAACGAGGAGAAGATCACCCCCTACATCACG
CTCACCACCGAGGCGGGCGCGGTGGGCGGAGTGCTGGCCTCCGGTTCGAGCTTCGGCGCCGCCACCAACGCCGATTGCAT
CATCGACCAGAACCAGATGTTCGACTTCTACGACGGCGGCGGCCTCGACATGACCTGCCTGGGCATGGCCGAGTGCGATG
CGGCCGGCAACGTCAACACCTCGCGGTTCGGCGGCAAGCTGAACGGCTGCGGCGGCTTCATCAACATCTCGCAGAACGCC
CGCACCGTCGTGTTCGCCGGGACGTTCACGGCCGGCGGCCTGGAGATCGCGGTGAGCGACGGTCAGGTGCGCATCGTGCG
GGAGGGCAAGGCCCGCAAGTTCGTGACCCAGGTCCAGCAGAACACGTTCTCCGGTCCCTACGCGGTCGAGCGCTCGCAGC
CGGTCCTCTACGTGACCGAGCGCTGCGTCTTCCAGCTGACGCCGGAGGGGCTGGAACTGGTCGAGGTCGCGCCCGGGATC
GATATCGAGCGCGACATCCTCGCCCACATGGACTTCGCCCCCGTGGTGCGCAATCCGGTGCCGATGGACCCGCGGATCTT
CCGCGACGAGCCGATGGAGCTGATCTCGGACCTGCTCAACCTCGATCTCAAGTCCCGCGTCAGCTACGACGGCGAGCGCA
ACATCCTCTTCGTCAACCTGGAGGGCTGGTACTGCCGGGTGAAGGGCGACATGGACGAGCTGCGCATGACCATCGTCGAG
GCCTGCCGGAAGGCGGGTCAGCGGGTCAACGCCGTGATCAACCACGACGGCTTCCGGCTCAACGAGAACTTGGTCGACGA
CTACGCCGGCATGGTCCAGTACCTGCAGGCGAACTACTACGCGACCACCACCCGGTACGCGACGAGCGCCTTCCTGCGCC
TCAAGATGGAGGAAGCCCTGAACAAGCGCGGGGTCGCGCCGCACGTCTTCGAGCGCAAGGAGGAGGCGCAGGCGTTCGTG
AGCAGCACCGCGGACAAGAAGGCCCGCAAGCGCATCTCCCCGGCGGTCGCGTCTGCGGCCTGA

Upstream 100 bases:

>100_bases
GAGACGTCCCGGCACCACGGGGGCGGCGCATGGCACAGTCGGAGGCGGCGGGCATCACGGCCGGCCGCTCCCGGAGGTGC
CGGGGAGGATCACGGGCTCC

Downstream 100 bases:

>100_bases
CGACCGGCCGGTCTCACACACTCCAGGAGCGCGGGATGCCGGTCGCGCCCGCCGCGTGGCCGGTGCCGTAGTCGGATTCA
GGCGATCGGCAAGCCGAGGA

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MRKNKVISAEEAIALIRKNDVVTTTGFVQSCIPEALHAALEKRFVETGSPRGLTLIMTAGAGDSKGLGTGRLHHDGLLSR
VIAANFGRMPKVAKAAQDNLIRGYNLPQGVISQLYRACAAGQPGLFSKVGLKTYVDPRHGGAKVNELTTEDIVKLVEVDG
EEWLFYTATKIDVAFIRATSADPSGNLSYEKEALTLDCLAQAMAARNNGGIVIAQVERIVDDGYLLPKDVRVPGILVDCV
VVAEPEMHRMNYGVMHDAALAGEIRVPVTGIKRMALNERKIIARRAAFELPPNGVVNLGVGAPEGISSVANEEKITPYIT
LTTEAGAVGGVLASGSSFGAATNADCIIDQNQMFDFYDGGGLDMTCLGMAECDAAGNVNTSRFGGKLNGCGGFINISQNA
RTVVFAGTFTAGGLEIAVSDGQVRIVREGKARKFVTQVQQNTFSGPYAVERSQPVLYVTERCVFQLTPEGLELVEVAPGI
DIERDILAHMDFAPVVRNPVPMDPRIFRDEPMELISDLLNLDLKSRVSYDGERNILFVNLEGWYCRVKGDMDELRMTIVE
ACRKAGQRVNAVINHDGFRLNENLVDDYAGMVQYLQANYYATTTRYATSAFLRLKMEEALNKRGVAPHVFERKEEAQAFV
SSTADKKARKRISPAVASAA

Sequences:

>Translated_660_residues
MRKNKVISAEEAIALIRKNDVVTTTGFVQSCIPEALHAALEKRFVETGSPRGLTLIMTAGAGDSKGLGTGRLHHDGLLSR
VIAANFGRMPKVAKAAQDNLIRGYNLPQGVISQLYRACAAGQPGLFSKVGLKTYVDPRHGGAKVNELTTEDIVKLVEVDG
EEWLFYTATKIDVAFIRATSADPSGNLSYEKEALTLDCLAQAMAARNNGGIVIAQVERIVDDGYLLPKDVRVPGILVDCV
VVAEPEMHRMNYGVMHDAALAGEIRVPVTGIKRMALNERKIIARRAAFELPPNGVVNLGVGAPEGISSVANEEKITPYIT
LTTEAGAVGGVLASGSSFGAATNADCIIDQNQMFDFYDGGGLDMTCLGMAECDAAGNVNTSRFGGKLNGCGGFINISQNA
RTVVFAGTFTAGGLEIAVSDGQVRIVREGKARKFVTQVQQNTFSGPYAVERSQPVLYVTERCVFQLTPEGLELVEVAPGI
DIERDILAHMDFAPVVRNPVPMDPRIFRDEPMELISDLLNLDLKSRVSYDGERNILFVNLEGWYCRVKGDMDELRMTIVE
ACRKAGQRVNAVINHDGFRLNENLVDDYAGMVQYLQANYYATTTRYATSAFLRLKMEEALNKRGVAPHVFERKEEAQAFV
SSTADKKARKRISPAVASAA
>Mature_660_residues
MRKNKVISAEEAIALIRKNDVVTTTGFVQSCIPEALHAALEKRFVETGSPRGLTLIMTAGAGDSKGLGTGRLHHDGLLSR
VIAANFGRMPKVAKAAQDNLIRGYNLPQGVISQLYRACAAGQPGLFSKVGLKTYVDPRHGGAKVNELTTEDIVKLVEVDG
EEWLFYTATKIDVAFIRATSADPSGNLSYEKEALTLDCLAQAMAARNNGGIVIAQVERIVDDGYLLPKDVRVPGILVDCV
VVAEPEMHRMNYGVMHDAALAGEIRVPVTGIKRMALNERKIIARRAAFELPPNGVVNLGVGAPEGISSVANEEKITPYIT
LTTEAGAVGGVLASGSSFGAATNADCIIDQNQMFDFYDGGGLDMTCLGMAECDAAGNVNTSRFGGKLNGCGGFINISQNA
RTVVFAGTFTAGGLEIAVSDGQVRIVREGKARKFVTQVQQNTFSGPYAVERSQPVLYVTERCVFQLTPEGLELVEVAPGI
DIERDILAHMDFAPVVRNPVPMDPRIFRDEPMELISDLLNLDLKSRVSYDGERNILFVNLEGWYCRVKGDMDELRMTIVE
ACRKAGQRVNAVINHDGFRLNENLVDDYAGMVQYLQANYYATTTRYATSAFLRLKMEEALNKRGVAPHVFERKEEAQAFV
SSTADKKARKRISPAVASAA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=494, Percent_Identity=24.8987854251012, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI11545841, Length=328, Percent_Identity=26.5243902439024, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1787985, Length=513, Percent_Identity=42.8849902534113, Blast_Score=423, Evalue=1e-119,
Organism=Escherichia coli, GI1788551, Length=242, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17531517, Length=506, Percent_Identity=24.703557312253, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21358325, Length=514, Percent_Identity=25.2918287937743, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24655794, Length=514, Percent_Identity=25.2918287937743, Blast_Score=97, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 71534; Mature: 71534

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00606 B_KETOACYL_SYNTHASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNKVISAEEAIALIRKNDVVTTTGFVQSCIPEALHAALEKRFVETGSPRGLTLIMTAG
CCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
AGDSKGLGTGRLHHDGLLSRVIAANFGRMPKVAKAAQDNLIRGYNLPQGVISQLYRACAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHC
GQPGLFSKVGLKTYVDPRHGGAKVNELTTEDIVKLVEVDGEEWLFYTATKIDVAFIRATS
CCCCCHHHCCCCEECCCCCCCCCCHHCCHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEC
ADPSGNLSYEKEALTLDCLAQAMAARNNGGIVIAQVERIVDDGYLLPKDVRVPGILVDCV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCEEEEEE
VVAEPEMHRMNYGVMHDAALAGEIRVPVTGIKRMALNERKIIARRAAFELPPNGVVNLGV
EECCCCHHHCCCCCEECHHHCCCEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECC
GAPEGISSVANEEKITPYITLTTEAGAVGGVLASGSSFGAATNADCIIDQNQMFDFYDGG
CCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCEEEEECCC
GLDMTCLGMAECDAAGNVNTSRFGGKLNGCGGFINISQNARTVVFAGTFTAGGLEIAVSD
CCCEEEEEHHHCCCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEEC
GQVRIVREGKARKFVTQVQQNTFSGPYAVERSQPVLYVTERCVFQLTPEGLELVEVAPGI
CEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEECCCC
DIERDILAHMDFAPVVRNPVPMDPRIFRDEPMELISDLLNLDLKSRVSYDGERNILFVNL
CCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEEEE
EGWYCRVKGDMDELRMTIVEACRKAGQRVNAVINHDGFRLNENLVDDYAGMVQYLQANYY
CCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCEE
ATTTRYATSAFLRLKMEEALNKRGVAPHVFERKEEAQAFVSSTADKKARKRISPAVASAA
EEHHHHHHHHHHHEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MRKNKVISAEEAIALIRKNDVVTTTGFVQSCIPEALHAALEKRFVETGSPRGLTLIMTAG
CCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
AGDSKGLGTGRLHHDGLLSRVIAANFGRMPKVAKAAQDNLIRGYNLPQGVISQLYRACAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHC
GQPGLFSKVGLKTYVDPRHGGAKVNELTTEDIVKLVEVDGEEWLFYTATKIDVAFIRATS
CCCCCHHHCCCCEECCCCCCCCCCHHCCHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEC
ADPSGNLSYEKEALTLDCLAQAMAARNNGGIVIAQVERIVDDGYLLPKDVRVPGILVDCV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCEEEEEE
VVAEPEMHRMNYGVMHDAALAGEIRVPVTGIKRMALNERKIIARRAAFELPPNGVVNLGV
EECCCCHHHCCCCCEECHHHCCCEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECC
GAPEGISSVANEEKITPYITLTTEAGAVGGVLASGSSFGAATNADCIIDQNQMFDFYDGG
CCCHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCEEEEECCC
GLDMTCLGMAECDAAGNVNTSRFGGKLNGCGGFINISQNARTVVFAGTFTAGGLEIAVSD
CCCEEEEEHHHCCCCCCCCHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEEC
GQVRIVREGKARKFVTQVQQNTFSGPYAVERSQPVLYVTERCVFQLTPEGLELVEVAPGI
CEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCEEEEECCCCCEEEEECCCC
DIERDILAHMDFAPVVRNPVPMDPRIFRDEPMELISDLLNLDLKSRVSYDGERNILFVNL
CCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEEEE
EGWYCRVKGDMDELRMTIVEACRKAGQRVNAVINHDGFRLNENLVDDYAGMVQYLQANYY
CCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHCCEE
ATTTRYATSAFLRLKMEEALNKRGVAPHVFERKEEAQAFVSSTADKKARKRISPAVASAA
EEHHHHHHHHHHHEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]