| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is comP [H]
Identifier: 170746768
GI number: 170746768
Start: 352110
End: 353540
Strand: Reverse
Name: comP [H]
Synonym: Mrad2831_0321
Alternate gene names: 170746768
Gene position: 353540-352110 (Counterclockwise)
Preceding gene: 170746776
Following gene: 170746767
Centisome position: 5.82
GC content: 71.91
Gene sequence:
>1431_bases GTGACGACCTTCAGCCTCAAGCACGTCCTGGCCGCCTGGGACGCGCGCGAGCTGGATCTCAAATGGGCTCTCGTCGGCCG GATCGCGCTGATCGCCATCCTCTGCGCCGCCGGAGCGGCCGCGTACGCCATGCACGACGTCGCGGCGAAGACCAGGCAGC GAAACGCCGAGACGGCCGGCGAAGTGCACAAGCAACTTCGCCTGCAGCTCCTGCGCATCGAGCGGGCCGCCGACATTCCC GTACGCTTTCCGGACTGGGAGATCGTCACCCGGTACGCCCTGCAACCCGGTCAGTGCGTGCAGCTGATCCCGGCGGAGAC CGGCCCGACACGGTCGAGCTGCGTCGGCGTCGAGCCGCACGCGCTCGCGGCACCCGACTGGTTCGCGACGCTCTACAGGT CCCTCTTCTTCGCCGGATCCACCGTCCGTCTGCCGCTCGAGCATCAGGGCTCGCGGAGAGGGATCGTGGAGGCGGACATC GATCCGCACGCCGTCGTCGGTTCGGCCTGGATCGTGCTGAAGCAGGTCTCCGGCGCGCTCGCGGCCATGACGGTCGTCCT GTGCGTGCTGGTCTACGGCGCGGTCGCGCACGCCCTGCGTCCCGCCAATGAGATCCTTGTCGGTATCGACCGCGTCGCGC AGGGCGACCTCGCGTGGCGTCTGCCGAGCTTCCGCCTGCGCGAGCTCCGGCGCATTGCGACGGTGTTCAACGCGCTTGCC GGCCATCTCCAGCTGGCCACACGGGAGCGCGCCGAGCTCGCCCGCCGGCTGATCGATGCCCAGGAGCAAGAGCGCCGGTG GCTGTCGCTCGAACTGCACGACGACGTGGCGCAGAGGCTGACGGCCCTGAGTCTCCTCGCCCGCTCGATCCAGGACGGCG CGCGCTCCGCGGCGCCTTCGGTCTCGACCGAGAGCGCCGAACTCGCCAGCATGGCATCGGACGCGGTGCGGGCGCTCCGG ATCACCCTGGCCTCGCTGCGGCCGCCGGAGATCGACGATCTCGGGCTGCGGATCGCGCTCCGCAGCCTGATCGCCGCGCA GGCGCAGCGGGCCAGCGGCCGGATCCAAGTCGCGCTGCGGGCCGACGCGCAGGTCGACCGCCTGCCCTCAGAGGCGGCGG CCCATGTCTACCGGATCGTCCAGGAAGGCCTCACCAACGCCGTCCGCCACGCGGCGGCACGCAACGTGGCGATCGCGCTG AACGTCGTGGAGACCGACGGCGGTGCGGACGTCCGGCTGGACTTCGCCGACGACGGGAGCGGCGCGCCCGCGGAGGTGCT GGAGCGCCCGCGTCCCGGTCTCGGCCTGCTCGGCATGCGCGACCGCGTCCACGCGCTCGGCGGGCAGATCGTGACGGAAA CGTCCCCGGGCGGCGGGTTTCGCCTGCGGGTCCGCTTTCGCGCCGCGCTCGCGGCCAGGGAGGTGTCATGA
Upstream 100 bases:
>100_bases AGAACGCCCGCGTTGACCTGGGCAAATCGCACGACTTCAGCGCGGACCCTTCCAAGACGGTCGCAAGCTCGATAACCCTC GGCCTCTCGGGAGGACACGG
Downstream 100 bases:
>100_bases CCGGACGGCGCATACGGGTGATGCTCGTCGACGATCACGCCGTCGTACGGGAGGGATACCGGCGGCTCCTGGAACGACAG CCCGATATGGAGGTCGCCGC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTTFSLKHVLAAWDARELDLKWALVGRIALIAILCAAGAAAYAMHDVAAKTRQRNAETAGEVHKQLRLQLLRIERAADIP VRFPDWEIVTRYALQPGQCVQLIPAETGPTRSSCVGVEPHALAAPDWFATLYRSLFFAGSTVRLPLEHQGSRRGIVEADI DPHAVVGSAWIVLKQVSGALAAMTVVLCVLVYGAVAHALRPANEILVGIDRVAQGDLAWRLPSFRLRELRRIATVFNALA GHLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALSLLARSIQDGARSAAPSVSTESAELASMASDAVRALR ITLASLRPPEIDDLGLRIALRSLIAAQAQRASGRIQVALRADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAIAL NVVETDGGADVRLDFADDGSGAPAEVLERPRPGLGLLGMRDRVHALGGQIVTETSPGGGFRLRVRFRAALAAREVS
Sequences:
>Translated_476_residues MTTFSLKHVLAAWDARELDLKWALVGRIALIAILCAAGAAAYAMHDVAAKTRQRNAETAGEVHKQLRLQLLRIERAADIP VRFPDWEIVTRYALQPGQCVQLIPAETGPTRSSCVGVEPHALAAPDWFATLYRSLFFAGSTVRLPLEHQGSRRGIVEADI DPHAVVGSAWIVLKQVSGALAAMTVVLCVLVYGAVAHALRPANEILVGIDRVAQGDLAWRLPSFRLRELRRIATVFNALA GHLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALSLLARSIQDGARSAAPSVSTESAELASMASDAVRALR ITLASLRPPEIDDLGLRIALRSLIAAQAQRASGRIQVALRADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAIAL NVVETDGGADVRLDFADDGSGAPAEVLERPRPGLGLLGMRDRVHALGGQIVTETSPGGGFRLRVRFRAALAAREVS >Mature_475_residues TTFSLKHVLAAWDARELDLKWALVGRIALIAILCAAGAAAYAMHDVAAKTRQRNAETAGEVHKQLRLQLLRIERAADIPV RFPDWEIVTRYALQPGQCVQLIPAETGPTRSSCVGVEPHALAAPDWFATLYRSLFFAGSTVRLPLEHQGSRRGIVEADID PHAVVGSAWIVLKQVSGALAAMTVVLCVLVYGAVAHALRPANEILVGIDRVAQGDLAWRLPSFRLRELRRIATVFNALAG HLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALSLLARSIQDGARSAAPSVSTESAELASMASDAVRALRI TLASLRPPEIDDLGLRIALRSLIAAQAQRASGRIQVALRADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAIALN VVETDGGADVRLDFADDGSGAPAEVLERPRPGLGLLGMRDRVHALGGQIVTETSPGGGFRLRVRFRAALAAREVS
Specific function: Sensor in the two-component regulatory system ComP/ComA involved in a major quorum response pathway that regulates the development of genetic competence. Plays a role in sporulation, at least partly interchangeable with that of SpoIIJ. Probably activates
COG id: COG4564
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=229, Percent_Identity=35.8078602620087, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788812, Length=283, Percent_Identity=27.5618374558304, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1787474, Length=210, Percent_Identity=29.0476190476191, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51466; Mature: 51335
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFSLKHVLAAWDARELDLKWALVGRIALIAILCAAGAAAYAMHDVAAKTRQRNAETAG CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH EVHKQLRLQLLRIERAADIPVRFPDWEIVTRYALQPGQCVQLIPAETGPTRSSCVGVEPH HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC ALAAPDWFATLYRSLFFAGSTVRLPLEHQGSRRGIVEADIDPHAVVGSAWIVLKQVSGAL CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH AAMTVVLCVLVYGAVAHALRPANEILVGIDRVAQGDLAWRLPSFRLRELRRIATVFNALA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHH GHLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALSLLARSIQDGARSAAPS HHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC VSTESAELASMASDAVRALRITLASLRPPEIDDLGLRIALRSLIAAQAQRASGRIQVALR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE ADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAIALNVVETDGGADVRLDFADDGS CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCC GAPAEVLERPRPGLGLLGMRDRVHALGGQIVTETSPGGGFRLRVRFRAALAAREVS CCCHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEEEEEEHHHHHHHCCC >Mature Secondary Structure TTFSLKHVLAAWDARELDLKWALVGRIALIAILCAAGAAAYAMHDVAAKTRQRNAETAG CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHH EVHKQLRLQLLRIERAADIPVRFPDWEIVTRYALQPGQCVQLIPAETGPTRSSCVGVEPH HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC ALAAPDWFATLYRSLFFAGSTVRLPLEHQGSRRGIVEADIDPHAVVGSAWIVLKQVSGAL CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH AAMTVVLCVLVYGAVAHALRPANEILVGIDRVAQGDLAWRLPSFRLRELRRIATVFNALA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHH GHLQLATRERAELARRLIDAQEQERRWLSLELHDDVAQRLTALSLLARSIQDGARSAAPS HHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC VSTESAELASMASDAVRALRITLASLRPPEIDDLGLRIALRSLIAAQAQRASGRIQVALR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE ADAQVDRLPSEAAAHVYRIVQEGLTNAVRHAAARNVAIALNVVETDGGADVRLDFADDGS CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCC GAPAEVLERPRPGLGLLGMRDRVHALGGQIVTETSPGGGFRLRVRFRAALAAREVS CCCHHHHCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCEEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2116363; 9274030; 9384377; 1715859 [H]