Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762405

Identifier: 170762405

GI number: 170762405

Start: 55189

End: 57792

Strand: Direct

Name: 170762405

Synonym: UPA3_0046

Alternate gene names: NA

Gene position: 55189-57792 (Clockwise)

Preceding gene: 170762092

Following gene: 170761991

Centisome position: 7.34

GC content: 27.04

Gene sequence:

>2604_bases
ATGAAAATTAAAAAACTTATTGCAAGCGTTAGTATAATCACACCAATTGTGTTTGTTTCAGCTTTAGCAGCGTCTTGTGT
TAATAATAAACATGAAGATAAAAATATTGTGCATAATAGTAGTGACCATGGTAATAATAAAAAAAATAATTTTACTAATG
ATTTAAATCAAAATTTAACAACCCACGAATTTAAATCAAATTTAATAAGTACTTCCCAATTAGATAATATAGCCAAATTA
ATTAATTTTACTTATGAAAATAAAGCTAATACTTATTTAAAAAATATACTTATTAATCAATTAAAACATTCACCTATTCA
AAATCAAGATTTTAAACTAGAAATTATAGGTTTATATCCTAAACAAAATTCCTTGCAGGATTTAATTATTTATTATAAGT
TAACTAACCAAAAAACAAAGGAGATTAAAGGTTATTATTTTGAATTAAATGGTTTTAAAAAACCAGATAACACCATTTTT
TCAAATCAATTAACGCCTGAGCTAAAAAAAATTATTGATACTATTCAATTCAAAAAAACTTTTGATCTCGTAATTAATAA
TCAACAAGTATTAAATTATGAAAATGTTTTACCTTCACAAATTAAAAATCAATTATTAATGGGTTTAAAAGTTATTCAAA
AAGAGTATACAGACAAAATTAAACTAAGTGTACTTGATGTTTTATTCATTAACGAGGGTGGGCAAATTAACGCTAATAAG
TTGGGGGCTTTTTCTTTATTATTAGAGGTTTTAGATCTTAAAAGTAAAAAAACTTACCAAATTCTTATTCCTGTTGATAA
ATTTAAAACTAATCCTTATGGTGCTGATGAATATGATTTATTGCCAACGCAAGTTAATAACGGATTTGCACCAACTAGCT
TAGCTCAAATTAATCAATACAATAATGCTGATCAACAAACACGTTATTTATATGATAATGAAAATTATTTAAAATCATTA
AAAGCATATCAAAGAAATGTAAATTGATACCAAATACGCCAAGATTTAATTAATAATAAACAAAAAATTAATGAATTTGA
TCAAAAAGCACCACAAGTTTTTCAAGATAGTTATGAATCTGCTGCTCGTAAAGGTTTTACTTTACCAGTATATGATGAAG
ATGGTAAATACCAAGGTTTATCATTTAACGAAACTGAAATTGGAAAAAGTGTTTCGTGAGTTGATGCAATTGGAAAAGAT
CAATGGAAAATAAATGGTTTGGCTAGAACTTTGCCTAATGATATGTATAAGCAAATTGCTTTACAAACATTTGGCATTCA
AATTCAAACGCCAAATGGTAAACCACGCGAATCTGATGTAGTAGCTGGAACAATGTGAATTATGGATTATCAAAAAAGAA
ATGATAATAAATATCCTACTAAATGGTATTTTGGCACAAATTTACATGTTGCAGAAGCATTAAAGTCAACAACAACAGTT
TTTGGTATTAATAAGATAATGCCAACAGTTAAGACTAAAACTACTTTGGGTTTAGCGAACGCTGATGATAATATTTATCG
TTTTAGTTTAGTTAGTAAAGATAATCAACCAAATATGGATAAACCTATTAGTAATGGTATTAAAACAATCTATGATGGTC
GTGACTTCTTAAAATTAAATCCTAGTGACTTATTAACATCAAAATTAAAAAATAAATACCATAACCTACAAGAATTTGTT
GATTTTGCTGTTTTTGAAATTGATTTTGAAAAAATAAAACTCGGCTCTATAACGAAAAATTTTTATAGTGGATCAGATTG
AAGTGTTGATAAATATAATAATTTAGATCCAAGTGAATTAGCTAAATTAATCACAAACGATTATGCACAAAAACCAAATG
AACAAATAAAATTTTTATCAAAATCTTATTTAAATGATTATGCACGTATTAATGTACCTTTGGATTCAAAATACAATCAG
GCTTTTGACACAAATAAATATGATGAATTATATGCTGTAGGTTGGCCAAGCTCTGCTTCTGATTATTTCTTAGACCCAAT
TAAAGATCAGAAACAATTTGAATCAAGACGTGAAAGTTATAGTTTATGAATTAATTCTAATTATCAATTTTATAATAAAT
TAAATCATAATCCTCCTTTGTTTCCTCTTACACAAATAAATCGTGGTGATTTCTTGTCATATAATATTGGTTATCGTAGT
TTTACTAATAAACCTGGATTGCTTGATGCTTTTATTGCTAGTCCTATTACTGGTAAAACTGTACATAAATCAACTGATAA
TCAAAATTATATTGGGTTTGGTTTAAATTATTTACCGATGCATTATTCTCCAATTGGGGGTTCATCAGGGACAAGTCTAC
GTAATCAAAAAAATGAATTAGTGGGAATTTGGCATGTTGGTAATGGTTTTGCCCAAACAGGTTTGGCTGCTGCTTTTCGA
TCTGAAGGCTATGATTATCATGGATTATATGGTAGTTATAACTTACCACAATATGATTTGATTTATGGTGGTGGAAAAGA
TCAAAAAACTTCCTATCGCCAAGCAATGATGGCGTTATATAAAAATAAAAATATTGCAACCGCTTTATTCCCTAATGGTT
TTGGTGAAGATCAAATCCCCAGTGCTTTTAAATTTAAAAATTAA

Upstream 100 bases:

>100_bases
CTAATAATTCAGAATTAAAGTCACAATTAGAAGGTTTAGGATATAAAGTAAGTGATGCTTCTGACGCTAACTATATTGAT
ATTTAATAGAAGGAATTATT

Downstream 100 bases:

>100_bases
TTAACTTTTATATTGAATTAGAAAATTATATGATGAATACAAAAACATTTACTTCCGTTAATAGAGTAATTTATGATGAT
AACTATTCGCTAAAGCAACA

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein LppD Family; Membrane Lipoprotein; Prolipoprotein

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL
INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF
SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK
LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL
KAYQRNVNWYQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVSWVDAIGKD
QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTMWIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV
FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV
DFAVFEIDFEKIKLGSITKNFYSGSDWSVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ
AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSLWINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS
FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR
SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN

Sequences:

>Translated_867_residues
MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL
INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF
SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK
LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL
KAYQRNVN*YQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVS*VDAIGKD
QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTM*IMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV
FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV
DFAVFEIDFEKIKLGSITKNFYSGSD*SVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ
AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSL*INSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS
FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR
SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN
>Mature_867_residues
MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL
INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF
SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK
LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL
KAYQRNVN*YQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVS*VDAIGKD
QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTM*IMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV
FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV
DFAVFEIDFEKIKLGSITKNFYSGSD*SVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ
AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSL*INSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS
FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR
SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98276; Mature: 98276

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
THEFKSNLISTSQLDNIAKLINFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYP
HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
KQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIFSNQLTPELKKIIDTIQFKKT
CCCCCCEEEEEEEECCCCCHHHCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHE
FDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK
EEEEECCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECHHH
LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQY
HHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
NNADQQTRYLYDNENYLKSLKAYQRNVNYQIRQDLINNKQKINEFDQKAPQVFQDSYESA
CCCCHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARKGFTLPVYDEDGKYQGLSFNETEIGKSVSVDAIGKDQWKINGLARTLPNDMYKQIALQ
HHCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECHHHHHCCHHHHHHHHHH
TFGIQIQTPNGKPRESDVVAGTMIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTVFGI
HEEEEEECCCCCCCCCCEEEEHHEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHHEEEH
NKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSD
HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCEEEECHHH
LLTSKLKNKYHNLQEFVDFAVFEIDFEKIKLGSITKNFYSGSDSVDKYNNLDPSELAKLI
HHHHHHHHHHHHHHHHHHHHHEEEEHHHEEECCHHHHHCCCCCCCHHCCCCCHHHHHHHH
TNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQAFDTNKYDELYAVGWPSSASDYFL
HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
DPIKDQKQFESRRESYSLINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRSFTNKP
CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCC
GLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWH
CCHHHHHCCCCCCCEEECCCCCCCEEEECCEECCEEECCCCCCCCCCCCCCCCCEEEEEE
VGNGFAQTGLAAAFRSEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNI
CCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE
ATALFPNGFGEDQIPSAFKFKN
EEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
THEFKSNLISTSQLDNIAKLINFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYP
HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
KQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIFSNQLTPELKKIIDTIQFKKT
CCCCCCEEEEEEEECCCCCHHHCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHE
FDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK
EEEEECCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECHHH
LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQY
HHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
NNADQQTRYLYDNENYLKSLKAYQRNVNYQIRQDLINNKQKINEFDQKAPQVFQDSYESA
CCCCHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARKGFTLPVYDEDGKYQGLSFNETEIGKSVSVDAIGKDQWKINGLARTLPNDMYKQIALQ
HHCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECHHHHHCCHHHHHHHHHH
TFGIQIQTPNGKPRESDVVAGTMIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTVFGI
HEEEEEECCCCCCCCCCEEEEHHEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHHEEEH
NKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSD
HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCEEEECHHH
LLTSKLKNKYHNLQEFVDFAVFEIDFEKIKLGSITKNFYSGSDSVDKYNNLDPSELAKLI
HHHHHHHHHHHHHHHHHHHHHEEEEHHHEEECCHHHHHCCCCCCCHHCCCCCHHHHHHHH
TNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQAFDTNKYDELYAVGWPSSASDYFL
HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
DPIKDQKQFESRRESYSLINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRSFTNKP
CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCC
GLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWH
CCHHHHHCCCCCCCEEECCCCCCCEEEECCEECCEEECCCCCCCCCCCCCCCCCEEEEEE
VGNGFAQTGLAAAFRSEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNI
CCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE
ATALFPNGFGEDQIPSAFKFKN
EEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA