Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762405
Identifier: 170762405
GI number: 170762405
Start: 55189
End: 57792
Strand: Direct
Name: 170762405
Synonym: UPA3_0046
Alternate gene names: NA
Gene position: 55189-57792 (Clockwise)
Preceding gene: 170762092
Following gene: 170761991
Centisome position: 7.34
GC content: 27.04
Gene sequence:
>2604_bases ATGAAAATTAAAAAACTTATTGCAAGCGTTAGTATAATCACACCAATTGTGTTTGTTTCAGCTTTAGCAGCGTCTTGTGT TAATAATAAACATGAAGATAAAAATATTGTGCATAATAGTAGTGACCATGGTAATAATAAAAAAAATAATTTTACTAATG ATTTAAATCAAAATTTAACAACCCACGAATTTAAATCAAATTTAATAAGTACTTCCCAATTAGATAATATAGCCAAATTA ATTAATTTTACTTATGAAAATAAAGCTAATACTTATTTAAAAAATATACTTATTAATCAATTAAAACATTCACCTATTCA AAATCAAGATTTTAAACTAGAAATTATAGGTTTATATCCTAAACAAAATTCCTTGCAGGATTTAATTATTTATTATAAGT TAACTAACCAAAAAACAAAGGAGATTAAAGGTTATTATTTTGAATTAAATGGTTTTAAAAAACCAGATAACACCATTTTT TCAAATCAATTAACGCCTGAGCTAAAAAAAATTATTGATACTATTCAATTCAAAAAAACTTTTGATCTCGTAATTAATAA TCAACAAGTATTAAATTATGAAAATGTTTTACCTTCACAAATTAAAAATCAATTATTAATGGGTTTAAAAGTTATTCAAA AAGAGTATACAGACAAAATTAAACTAAGTGTACTTGATGTTTTATTCATTAACGAGGGTGGGCAAATTAACGCTAATAAG TTGGGGGCTTTTTCTTTATTATTAGAGGTTTTAGATCTTAAAAGTAAAAAAACTTACCAAATTCTTATTCCTGTTGATAA ATTTAAAACTAATCCTTATGGTGCTGATGAATATGATTTATTGCCAACGCAAGTTAATAACGGATTTGCACCAACTAGCT TAGCTCAAATTAATCAATACAATAATGCTGATCAACAAACACGTTATTTATATGATAATGAAAATTATTTAAAATCATTA AAAGCATATCAAAGAAATGTAAATTGATACCAAATACGCCAAGATTTAATTAATAATAAACAAAAAATTAATGAATTTGA TCAAAAAGCACCACAAGTTTTTCAAGATAGTTATGAATCTGCTGCTCGTAAAGGTTTTACTTTACCAGTATATGATGAAG ATGGTAAATACCAAGGTTTATCATTTAACGAAACTGAAATTGGAAAAAGTGTTTCGTGAGTTGATGCAATTGGAAAAGAT CAATGGAAAATAAATGGTTTGGCTAGAACTTTGCCTAATGATATGTATAAGCAAATTGCTTTACAAACATTTGGCATTCA AATTCAAACGCCAAATGGTAAACCACGCGAATCTGATGTAGTAGCTGGAACAATGTGAATTATGGATTATCAAAAAAGAA ATGATAATAAATATCCTACTAAATGGTATTTTGGCACAAATTTACATGTTGCAGAAGCATTAAAGTCAACAACAACAGTT TTTGGTATTAATAAGATAATGCCAACAGTTAAGACTAAAACTACTTTGGGTTTAGCGAACGCTGATGATAATATTTATCG TTTTAGTTTAGTTAGTAAAGATAATCAACCAAATATGGATAAACCTATTAGTAATGGTATTAAAACAATCTATGATGGTC GTGACTTCTTAAAATTAAATCCTAGTGACTTATTAACATCAAAATTAAAAAATAAATACCATAACCTACAAGAATTTGTT GATTTTGCTGTTTTTGAAATTGATTTTGAAAAAATAAAACTCGGCTCTATAACGAAAAATTTTTATAGTGGATCAGATTG AAGTGTTGATAAATATAATAATTTAGATCCAAGTGAATTAGCTAAATTAATCACAAACGATTATGCACAAAAACCAAATG AACAAATAAAATTTTTATCAAAATCTTATTTAAATGATTATGCACGTATTAATGTACCTTTGGATTCAAAATACAATCAG GCTTTTGACACAAATAAATATGATGAATTATATGCTGTAGGTTGGCCAAGCTCTGCTTCTGATTATTTCTTAGACCCAAT TAAAGATCAGAAACAATTTGAATCAAGACGTGAAAGTTATAGTTTATGAATTAATTCTAATTATCAATTTTATAATAAAT TAAATCATAATCCTCCTTTGTTTCCTCTTACACAAATAAATCGTGGTGATTTCTTGTCATATAATATTGGTTATCGTAGT TTTACTAATAAACCTGGATTGCTTGATGCTTTTATTGCTAGTCCTATTACTGGTAAAACTGTACATAAATCAACTGATAA TCAAAATTATATTGGGTTTGGTTTAAATTATTTACCGATGCATTATTCTCCAATTGGGGGTTCATCAGGGACAAGTCTAC GTAATCAAAAAAATGAATTAGTGGGAATTTGGCATGTTGGTAATGGTTTTGCCCAAACAGGTTTGGCTGCTGCTTTTCGA TCTGAAGGCTATGATTATCATGGATTATATGGTAGTTATAACTTACCACAATATGATTTGATTTATGGTGGTGGAAAAGA TCAAAAAACTTCCTATCGCCAAGCAATGATGGCGTTATATAAAAATAAAAATATTGCAACCGCTTTATTCCCTAATGGTT TTGGTGAAGATCAAATCCCCAGTGCTTTTAAATTTAAAAATTAA
Upstream 100 bases:
>100_bases CTAATAATTCAGAATTAAAGTCACAATTAGAAGGTTTAGGATATAAAGTAAGTGATGCTTCTGACGCTAACTATATTGAT ATTTAATAGAAGGAATTATT
Downstream 100 bases:
>100_bases TTAACTTTTATATTGAATTAGAAAATTATATGATGAATACAAAAACATTTACTTCCGTTAATAGAGTAATTTATGATGAT AACTATTCGCTAAAGCAACA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein LppD Family; Membrane Lipoprotein; Prolipoprotein
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL KAYQRNVNWYQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVSWVDAIGKD QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTMWIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV DFAVFEIDFEKIKLGSITKNFYSGSDWSVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSLWINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN
Sequences:
>Translated_867_residues MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL KAYQRNVN*YQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVS*VDAIGKD QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTM*IMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV DFAVFEIDFEKIKLGSITKNFYSGSD*SVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSL*INSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN >Mature_867_residues MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLTTHEFKSNLISTSQLDNIAKL INFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYPKQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIF SNQLTPELKKIIDTIQFKKTFDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQYNNADQQTRYLYDNENYLKSL KAYQRNVN*YQIRQDLINNKQKINEFDQKAPQVFQDSYESAARKGFTLPVYDEDGKYQGLSFNETEIGKSVS*VDAIGKD QWKINGLARTLPNDMYKQIALQTFGIQIQTPNGKPRESDVVAGTM*IMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTV FGINKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSDLLTSKLKNKYHNLQEFV DFAVFEIDFEKIKLGSITKNFYSGSD*SVDKYNNLDPSELAKLITNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQ AFDTNKYDELYAVGWPSSASDYFLDPIKDQKQFESRRESYSL*INSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRS FTNKPGLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWHVGNGFAQTGLAAAFR SEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNIATALFPNGFGEDQIPSAFKFKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98276; Mature: 98276
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC THEFKSNLISTSQLDNIAKLINFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYP HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC KQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIFSNQLTPELKKIIDTIQFKKT CCCCCCEEEEEEEECCCCCHHHCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHE FDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK EEEEECCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECHHH LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQY HHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC NNADQQTRYLYDNENYLKSLKAYQRNVNYQIRQDLINNKQKINEFDQKAPQVFQDSYESA CCCCHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARKGFTLPVYDEDGKYQGLSFNETEIGKSVSVDAIGKDQWKINGLARTLPNDMYKQIALQ HHCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECHHHHHCCHHHHHHHHHH TFGIQIQTPNGKPRESDVVAGTMIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTVFGI HEEEEEECCCCCCCCCCEEEEHHEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHHEEEH NKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSD HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCEEEECHHH LLTSKLKNKYHNLQEFVDFAVFEIDFEKIKLGSITKNFYSGSDSVDKYNNLDPSELAKLI HHHHHHHHHHHHHHHHHHHHHEEEEHHHEEECCHHHHHCCCCCCCHHCCCCCHHHHHHHH TNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQAFDTNKYDELYAVGWPSSASDYFL HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC DPIKDQKQFESRRESYSLINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRSFTNKP CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCC GLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWH CCHHHHHCCCCCCCEEECCCCCCCEEEECCEECCEEECCCCCCCCCCCCCCCCCEEEEEE VGNGFAQTGLAAAFRSEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNI CCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE ATALFPNGFGEDQIPSAFKFKN EEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIKKLIASVSIITPIVFVSALAASCVNNKHEDKNIVHNSSDHGNNKKNNFTNDLNQNLT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC THEFKSNLISTSQLDNIAKLINFTYENKANTYLKNILINQLKHSPIQNQDFKLEIIGLYP HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC KQNSLQDLIIYYKLTNQKTKEIKGYYFELNGFKKPDNTIFSNQLTPELKKIIDTIQFKKT CCCCCCEEEEEEEECCCCCHHHCCEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHE FDLVINNQQVLNYENVLPSQIKNQLLMGLKVIQKEYTDKIKLSVLDVLFINEGGQINANK EEEEECCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECHHH LGAFSLLLEVLDLKSKKTYQILIPVDKFKTNPYGADEYDLLPTQVNNGFAPTSLAQINQY HHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC NNADQQTRYLYDNENYLKSLKAYQRNVNYQIRQDLINNKQKINEFDQKAPQVFQDSYESA CCCCHHHEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARKGFTLPVYDEDGKYQGLSFNETEIGKSVSVDAIGKDQWKINGLARTLPNDMYKQIALQ HHCCCEEEEECCCCCCCCCCCCHHHCCCEEEEEECCCCCEEECHHHHHCCHHHHHHHHHH TFGIQIQTPNGKPRESDVVAGTMIMDYQKRNDNKYPTKWYFGTNLHVAEALKSTTTVFGI HEEEEEECCCCCCCCCCEEEEHHEEEHHHCCCCCCCCEEEECCCCHHHHHHHHHHHEEEH NKIMPTVKTKTTLGLANADDNIYRFSLVSKDNQPNMDKPISNGIKTIYDGRDFLKLNPSD HHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCEEEECHHH LLTSKLKNKYHNLQEFVDFAVFEIDFEKIKLGSITKNFYSGSDSVDKYNNLDPSELAKLI HHHHHHHHHHHHHHHHHHHHHEEEEHHHEEECCHHHHHCCCCCCCHHCCCCCHHHHHHHH TNDYAQKPNEQIKFLSKSYLNDYARINVPLDSKYNQAFDTNKYDELYAVGWPSSASDYFL HHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC DPIKDQKQFESRRESYSLINSNYQFYNKLNHNPPLFPLTQINRGDFLSYNIGYRSFTNKP CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCC GLLDAFIASPITGKTVHKSTDNQNYIGFGLNYLPMHYSPIGGSSGTSLRNQKNELVGIWH CCHHHHHCCCCCCCEEECCCCCCCEEEECCEECCEEECCCCCCCCCCCCCCCCCEEEEEE VGNGFAQTGLAAAFRSEGYDYHGLYGSYNLPQYDLIYGGGKDQKTSYRQAMMALYKNKNI CCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE ATALFPNGFGEDQIPSAFKFKN EEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA