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The map label for this gene is rsmI [H]

Identifier: 170762351

GI number: 170762351

Start: 237759

End: 238598

Strand: Direct

Name: rsmI [H]

Synonym: UPA3_0201

Alternate gene names: 170762351

Gene position: 237759-238598 (Clockwise)

Preceding gene: 170762056

Following gene: 170762441

Centisome position: 31.63

GC content: 25.0

Gene sequence:

>840_bases
ATGAAATTATGTGATAAAGAATATATTTTATCTGTTATTGCTACACCAATTGGCAATCTTGAAGAAGTTAGTGAACGTGT
TATTAAATGTTTAAATGAAGCTTATGTTATTTTATGTGAAGACACTCGAGTTACAGCTAAGCTGTTGCATCTATTAAATA
TTTATGATTACAAAAAATTAATTAGTTATCATAATTTTAATGAAATTCAAAAATTGAATGAAGCGATTAATTATATTAAA
AAATATCCAACAGCTTTAGTTAGTGATGCAGGCTATCCAACAATTTCAGATCCTGGTTATAAATTAATTAATGAATGTCA
TCAACAAAATATTGGAATTCAAGTTATTAATGGTCCCTCAAGTTTGATGCATGCTCTAGTTGCTAGTGGAATGTGTTCGC
AAGATTTTATGTTTTTAGGTTTTTTAGGTAAAACGCAAAAACAACGTGTTGAAAAACTAAAATTATATAAAAACTTGCAA
ACAACTTTTGTTATTTATGAAGCTGTGCACCGAATAGAAAAGACTTTAATGGATATATATGAAATATGAGGAGATATTTT
AATTTTTATCGGGCGCGAACTAACAAAAAAAAATGAAAGTCATTATTATGGTTATCTTTCACAACTACCCCCAATTACTG
AAAAAGGAGAGTTTGTAATTGTTATTGATAATAAGATCAATCAAGATGTTATTAAGAATAATAATATTAATGAATGTCTA
ATTAAAATTAGAGATTTAATGAAACAAAATTTTAAATTAAAAGATGCTTGTAAAGAAGTTAGTAAATCTTCTAATTTTGA
TAGTAAAGAATTATATAAATTAATAATTAATCAAAAATAA

Upstream 100 bases:

>100_bases
AAATATTAGTTATTGTAATCACAAACAATTATTTAAAAGATTAAACATGATGCAAAAAACATTTAAAGAAATTAAAATAA
TTATTGAAGGATTTTAACTT

Downstream 100 bases:

>100_bases
TATGTTAGATAAATTAATTAAAACTCTAAAAAATCCTCATAGTATTGATGACATTGTTGGTCAAAAATATTTATTAGATG
AAATTGGTATAATTAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKLCDKEYILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLLNIYDYKKLISYHNFNEIQKLNEAINYIK
KYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVINGPSSLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNLQ
TTFVIYEAVHRIEKTLMDIYEIWGDILIFIGRELTKKNESHYYGYLSQLPPITEKGEFVIVIDNKINQDVIKNNNINECL
IKIRDLMKQNFKLKDACKEVSKSSNFDSKELYKLIINQK

Sequences:

>Translated_279_residues
MKLCDKEYILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLLNIYDYKKLISYHNFNEIQKLNEAINYIK
KYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVINGPSSLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNLQ
TTFVIYEAVHRIEKTLMDIYEI*GDILIFIGRELTKKNESHYYGYLSQLPPITEKGEFVIVIDNKINQDVIKNNNINECL
IKIRDLMKQNFKLKDACKEVSKSSNFDSKELYKLIINQK
>Mature_279_residues
MKLCDKEYILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLLNIYDYKKLISYHNFNEIQKLNEAINYIK
KYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVINGPSSLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNLQ
TTFVIYEAVHRIEKTLMDIYEI*GDILIFIGRELTKKNESHYYGYLSQLPPITEKGEFVIVIDNKINQDVIKNNNINECL
IKIRDLMKQNFKLKDACKEVSKSSNFDSKELYKLIINQK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32059; Mature: 32059

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLCDKEYILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLLNIYDYKKL
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
ISYHNFNEIQKLNEAINYIKKYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVINGPS
HHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHH
SLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNLQTTFVIYEAVHRIEKTLMDIY
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGDILIFIGRELTKKNESHYYGYLSQLPPITEKGEFVIVIDNKINQDVIKNNNINECLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHH
KIRDLMKQNFKLKDACKEVSKSSNFDSKELYKLIINQK
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKLCDKEYILSVIATPIGNLEEVSERVIKCLNEAYVILCEDTRVTAKLLHLLNIYDYKKL
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
ISYHNFNEIQKLNEAINYIKKYPTALVSDAGYPTISDPGYKLINECHQQNIGIQVINGPS
HHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHH
SLMHALVASGMCSQDFMFLGFLGKTQKQRVEKLKLYKNLQTTFVIYEAVHRIEKTLMDIY
HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGDILIFIGRELTKKNESHYYGYLSQLPPITEKGEFVIVIDNKINQDVIKNNNINECLI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHH
KIRDLMKQNFKLKDACKEVSKSSNFDSKELYKLIINQK
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]