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The map label for this gene is 170762056

Identifier: 170762056

GI number: 170762056

Start: 237216

End: 237755

Strand: Direct

Name: 170762056

Synonym: UPA3_0200

Alternate gene names: NA

Gene position: 237216-237755 (Clockwise)

Preceding gene: 170762174

Following gene: 170762351

Centisome position: 31.56

GC content: 21.3

Gene sequence:

>540_bases
ATGAATAAACCAATTATCAAAGAAGTTATTATTGTAGAAGGTAAAACAGATGCACAAAAAATTGATCAATTAGTAAATGC
ACAAATTATTACTACTAATGGATCAGAAATTAATAAAAAGACTTTAGCTTTAATTAAACAAGCACAATTATCAAAAGGAA
TTATTTTATTTTTAGATCCTGATTATCAAGGAGAAAGAATTCGTAAAATAATTACTAATTATTTAAAAGATGGCATTATT
AAACAGTGTTTTATTAGTAAGGACAATATGAAGAATAATTCTAAAAAAATTGGAATTGCTGAAGCTAATAATGATGCTTT
ATTGAAAGCTTTGAAATCTCAAGGAACATTCGTTATTAATTCAATTGAATCTATTACTTGATTAGAATACTTAAGTTTAA
ATTTAAATAACAAAAAAATACGTTTAATGCTTTGTGATTATTTAAATATTAGTTATTGTAATCACAAACAATTATTTAAA
AGATTAAACATGATGCAAAAAACATTTAAAGAAATTAAAATAATTATTGAAGGATTTTAA

Upstream 100 bases:

>100_bases
CAAATGTATTGAAATTTATTCAGAGGGTACAGGTTCGATGTCGTTTGTACATGATGAAAATTCAAAAGTTTTATTTGCTA
AAAAAATATATTAAATAAAA

Downstream 100 bases:

>100_bases
CTTATGAAATTATGTGATAAAGAATATATTTTATCTGTTATTGCTACACCAATTGGCAATCTTGAAGAAGTTAGTGAACG
TGTTATTAAATGTTTAAATG

Product: primase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNKPIIKEVIIVEGKTDAQKIDQLVNAQIITTNGSEINKKTLALIKQAQLSKGIILFLDPDYQGERIRKIITNYLKDGII
KQCFISKDNMKNNSKKIGIAEANNDALLKALKSQGTFVINSIESITWLEYLSLNLNNKKIRLMLCDYLNISYCNHKQLFK
RLNMMQKTFKEIKIIIEGF

Sequences:

>Translated_179_residues
MNKPIIKEVIIVEGKTDAQKIDQLVNAQIITTNGSEINKKTLALIKQAQLSKGIILFLDPDYQGERIRKIITNYLKDGII
KQCFISKDNMKNNSKKIGIAEANNDALLKALKSQGTFVINSIESIT*LEYLSLNLNNKKIRLMLCDYLNISYCNHKQLFK
RLNMMQKTFKEIKIIIEGF
>Mature_179_residues
MNKPIIKEVIIVEGKTDAQKIDQLVNAQIITTNGSEINKKTLALIKQAQLSKGIILFLDPDYQGERIRKIITNYLKDGII
KQCFISKDNMKNNSKKIGIAEANNDALLKALKSQGTFVINSIESIT*LEYLSLNLNNKKIRLMLCDYLNISYCNHKQLFK
RLNMMQKTFKEIKIIIEGF

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004466
- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 20333; Mature: 20333

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPIIKEVIIVEGKTDAQKIDQLVNAQIITTNGSEINKKTLALIKQAQLSKGIILFLDP
CCCCCEEEEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC
DYQGERIRKIITNYLKDGIIKQCFISKDNMKNNSKKIGIAEANNDALLKALKSQGTFVIN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEE
SIESITLEYLSLNLNNKKIRLMLCDYLNISYCNHKQLFKRLNMMQKTFKEIKIIIEGF
CHHHHEEEHEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MNKPIIKEVIIVEGKTDAQKIDQLVNAQIITTNGSEINKKTLALIKQAQLSKGIILFLDP
CCCCCEEEEEEEECCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC
DYQGERIRKIITNYLKDGIIKQCFISKDNMKNNSKKIGIAEANNDALLKALKSQGTFVIN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEE
SIESITLEYLSLNLNNKKIRLMLCDYLNISYCNHKQLFKRLNMMQKTFKEIKIIIEGF
CHHHHEEEHEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]