Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is recG [H]

Identifier: 170762241

GI number: 170762241

Start: 40361

End: 41749

Strand: Direct

Name: recG [H]

Synonym: UPA3_0037

Alternate gene names: 170762241

Gene position: 40361-41749 (Clockwise)

Preceding gene: 170762402

Following gene: 170762033

Centisome position: 5.37

GC content: 24.98

Gene sequence:

>1389_bases
TTGAATTTAAAACAATATTTAGGTGAAACTAATTTTTATGATAAGAAAGAAAAATTAGAAAAGAAAAAAATAAAATCATG
ACTAAAAAGTGTTTGTACATTTGCTAATGGTCAAGGTGGCAAATTAATATTTGGTGTAAATGAAAACAATAATGTTTTAG
GATTAGAAAATTATTTAAATGATTCTGAATTTATTAGTGAAACTATTAAAACAAAAATTGATAATATTCCAGAATTTGAT
ATTGAAATTAATGAATACGAAAATAAAATTATTCTAATACTAACAATTTTTCCAGGAAGAAATCCACCATATTTTCTAGT
TGATAATGGTTCAAAAACTCCATATAAAAGAGTTGGTAATCAAAGTGTAATTGCTTCAATTAATGATTTATTAAATTGAT
GTTTAAGAAGTCAAAATCGCACCTATGATTCATTAGTTTCTAATAAATTACTAAAAGATGTTAGTTTTTTAATGTTAAAA
AATGAATATCAAAAACATACAGAAAATTTATGAGAGGATAAATTTTTAAAATCCTTTGAATTAATTGATAACAATAATTA
CTTAACAAATGCTGGAGCTTTATTTGCTGATGGATATCAAGTTTATCAATCAGGAGTTTTTTGTACTCGTTGAAATGGAA
AGACTAAAACAAATGGTTTAATTGAAGCATTAGATGATGCAGAATTTGAAGGGAATTTACTATTTCTTTTAAATTCAAGT
ATAAACTTTATTAAAAGAAATAGTAAAAACATGTGAAGAAAAGGAGTTTTATATCGTATTCAATATCCTGAATATCCTAT
AAAAGCAGTGCAAGAAGTAATAGTTAATGCTTTGATTCATCGAGATTATTCAATTATTGGTAGTGAAGTACATATTGACA
TGTATGATGATAGATTAGAAGTATATTCTCCTGGTGGTATGTTTGATGGGAATTTTGTCCAAAATATCGACCTTTATAAT
GTATGATCAATTCGCCGTAATCCTATTTTAGCTGATTTATTTGCACGAATGAATTTAATGGAAAGAAGAGGTTCTGGTTT
AAAAAATATTTTAGAAATTTATGCATCTAAAGAAAATTATCGAGAAGATTTAAAACCGGAGTTTCGTTCAACTGAATCTG
CTTTCTTTGTTGTTTTAAAAAATTTAAATTATCAAGAGCAAAATATATCAAAAAATGAAAATCAAAAAATATCCCCTAGC
CAAAGACGTAAAAAAATCATAGAATTTATCGGACAAAATCCAAAAACAACAGCTTATGAATTAACAAAAATATTTTTTGT
TTCAATTAATACCATTGAACGCGATCTAGCTAAATTAGTACATGATGGATATGTTGAATTTGTGGGATCATCAAAAAATG
GTGAATGAAAAATTAAAACTAATCAATAA

Upstream 100 bases:

>100_bases
TTTAAACTTTATTAATCACAATAATTTAGTATTTATCCAAAATTTTAATAACAATATTAGTAGTATAATGACTTGTAAAT
AATACAAGGAGATTTTGGTG

Downstream 100 bases:

>100_bases
ATCACGTTGTTAAAAAATTTTCTCTTCTTTAATCTTGTTATAATTCTTAGTTAGTAATAGTTTAGGTGGTTAAACGTGAA
AAAATATGATGTAATTGTCA

Product: AAA domain-contain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MNLKQYLGETNFYDKKEKLEKKKIKSWLKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEFD
IEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLNWCLRSQNRTYDSLVSNKLLKDVSFLMLK
NEYQKHTENLWEDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTRWNGKTKTNGLIEALDDAEFEGNLLFLLNSS
INFIKRNSKNMWRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLYN
VWSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISPS
QRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGEWKIKTNQ

Sequences:

>Translated_462_residues
MNLKQYLGETNFYDKKEKLEKKKIKS*LKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEFD
IEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLN*CLRSQNRTYDSLVSNKLLKDVSFLMLK
NEYQKHTENL*EDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTR*NGKTKTNGLIEALDDAEFEGNLLFLLNSS
INFIKRNSKNM*RKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLYN
V*SIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISPS
QRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGE*KIKTNQ
>Mature_462_residues
MNLKQYLGETNFYDKKEKLEKKKIKS*LKSVCTFANGQGGKLIFGVNENNNVLGLENYLNDSEFISETIKTKIDNIPEFD
IEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQSVIASINDLLN*CLRSQNRTYDSLVSNKLLKDVSFLMLK
NEYQKHTENL*EDKFLKSFELIDNNNYLTNAGALFADGYQVYQSGVFCTR*NGKTKTNGLIEALDDAEFEGNLLFLLNSS
INFIKRNSKNM*RKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPGGMFDGNFVQNIDLYN
V*SIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKPEFRSTESAFFVVLKNLNYQEQNISKNENQKISPS
QRRKKIIEFIGQNPKTTAYELTKIFFVSINTIERDLAKLVHDGYVEFVGSSKNGE*KIKTNQ

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 52319; Mature: 52319

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKQYLGETNFYDKKEKLEKKKIKSLKSVCTFANGQGGKLIFGVNENNNVLGLENYLND
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCCH
SEFISETIKTKIDNIPEFDIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQ
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHCCCH
SVIASINDLLNCLRSQNRTYDSLVSNKLLKDVSFLMLKNEYQKHTENLEDKFLKSFELID
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEC
NNNYLTNAGALFADGYQVYQSGVFCTRNGKTKTNGLIEALDDAEFEGNLLFLLNSSINFI
CCCEEECCCCHHHCCHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHHH
KRNSKNMRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPG
HCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCEEEECCC
GMFDGNFVQNIDLYNVSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKP
CCCCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCH
EFRSTESAFFVVLKNLNYQEQNISKNENQKISPSQRRKKIIEFIGQNPKTTAYELTKIFF
HHCCCCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEE
VSINTIERDLAKLVHDGYVEFVGSSKNGEKIKTNQ
EEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNLKQYLGETNFYDKKEKLEKKKIKSLKSVCTFANGQGGKLIFGVNENNNVLGLENYLND
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCCH
SEFISETIKTKIDNIPEFDIEINEYENKIILILTIFPGRNPPYFLVDNGSKTPYKRVGNQ
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHCCCH
SVIASINDLLNCLRSQNRTYDSLVSNKLLKDVSFLMLKNEYQKHTENLEDKFLKSFELID
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEC
NNNYLTNAGALFADGYQVYQSGVFCTRNGKTKTNGLIEALDDAEFEGNLLFLLNSSINFI
CCCEEECCCCHHHCCHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCHHH
KRNSKNMRKGVLYRIQYPEYPIKAVQEVIVNALIHRDYSIIGSEVHIDMYDDRLEVYSPG
HCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCEEEECCC
GMFDGNFVQNIDLYNVSIRRNPILADLFARMNLMERRGSGLKNILEIYASKENYREDLKP
CCCCCCEEECEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCH
EFRSTESAFFVVLKNLNYQEQNISKNENQKISPSQRRKKIIEFIGQNPKTTAYELTKIFF
HHCCCCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEEEE
VSINTIERDLAKLVHDGYVEFVGSSKNGEKIKTNQ
EEHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9603897 [H]