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The map label for this gene is atpC

Identifier: 170762175

GI number: 170762175

Start: 169557

End: 169967

Strand: Reverse

Name: atpC

Synonym: UPA3_0134

Alternate gene names: 170762175

Gene position: 169967-169557 (Counterclockwise)

Preceding gene: 170762163

Following gene: 170762054

Centisome position: 22.61

GC content: 24.82

Gene sequence:

>411_bases
ATGGCTAATTTAACTAAATTAAAAATTGTTACACCTTATGCACAAATTTTAGAAAAAGATGTGTATAGTGTTGAATTAAA
AACATCAGAAGGACGAATTACCGTTTTACCTGACCATAACCCTTTGATGTCAACAATTGAAAACCATGTTGCTTATATTC
GTGAATTACCAAATACTCCACGTAAACCACTATTATTATTAGATGGTATAGTTTATATTGAACAACATCAAGTTCGTGTT
TTTAGTGACTATTTTAAATTTTTAGATGAAATTCAAATTGATGAAATTAATTCTTCGTTAAATCAATTAAAACATGATTT
AAATAATGAAGAAGATGATAAGAAAAAACTTCAATTAAAATCTAAAATTAAATTAAACGAATCAATTTTAATCGCTTATA
AAGATCGATAA

Upstream 100 bases:

>100_bases
GAAAAATTCTTGATGGTGAATGTGATGATATTCATGAACAACATTTCTTATATGTTGGTAAAATTGATGACGTTTTTGAA
AAAGCAGCAAAAAATAAATA

Downstream 100 bases:

>100_bases
AATAATAAAGACAAGAGGAATTTTCTTCTTGTTTTTTTTATTTTTTTTAAAAAATAAATAGCCCTTAAAATAAATTAATT
ATGTTTTAAATTTATCTAGT

Product: ATP synthase F1, epsilon subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MANLTKLKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTPRKPLLLLDGIVYIEQHQVRV
FSDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQLKSKIKLNESILIAYKDR

Sequences:

>Translated_136_residues
MANLTKLKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTPRKPLLLLDGIVYIEQHQVRV
FSDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQLKSKIKLNESILIAYKDR
>Mature_135_residues
ANLTKLKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTPRKPLLLLDGIVYIEQHQVRVF
SDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQLKSKIKLNESILIAYKDR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_UREP2 (B1AIB7)

Other databases:

- EMBL:   CP000942
- RefSeq:   YP_001752211.1
- ProteinModelPortal:   B1AIB7
- GeneID:   6155240
- GenomeReviews:   CP000942_GR
- KEGG:   upa:UPA3_0134
- HOGENOM:   HBG734358
- OMA:   EVDINET
- ProtClustDB:   CLSK2298779
- BioCyc:   UPAR505682:UPA3_0134-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15891; Mature: 15759

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLTKLKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTP
CCCCEEEEEECHHHHHHHCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
RKPLLLLDGIVYIEQHQVRVFSDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQLK
CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SKIKLNESILIAYKDR
HHEECCCEEEEEEECC
>Mature Secondary Structure 
ANLTKLKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTP
CCCEEEEEECHHHHHHHCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
RKPLLLLDGIVYIEQHQVRVFSDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQLK
CCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SKIKLNESILIAYKDR
HHEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA