Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762061
Identifier: 170762061
GI number: 170762061
Start: 29042
End: 29788
Strand: Reverse
Name: 170762061
Synonym: UPA3_0028
Alternate gene names: NA
Gene position: 29788-29042 (Counterclockwise)
Preceding gene: 170762282
Following gene: 170762150
Centisome position: 3.96
GC content: 23.29
Gene sequence:
>747_bases ATGAAAATAAAATTAAAAAAAATAATCATGTCTTTTTTGGGATTGCCAATTTTGGCAATTCCCCTTATCGTTAGCGCTTG TTCGCAATTTAAAATTAACCAGGATGTTATTTTAACTTATCGTCCAACAGTTTCATTAGCAAAAGAATTTGCTAATGATA ACAATACTATTGATGATGTTTTAAAAAAAGTAAAAATCAATAAAGACGGATCAAATAACCTACTAGTTTATGATTTATCA AGAAATCCAAAGAATGTCCAGTATAAAATTGTTGATATTAAAAAGGATTCAGAACAAATTCTTAAAGTTACGATTAATGC TAAAATTCAAAAATATAAAGAATCAATTAATTATGATTTTTATTTTCAACCATTTTTAACTCCTAAACAAAAAGAAGATA AAACAATCCTTCAACAAAATTTAAATATTATTAAAAGTGCTTGGGATTATGATCAAAAACAAAAAATAGGTTTTTTTAAT CTTAGAATAAAACCAGAATATCAAAAAAGAAGTTTGGTTGAAATTAAAACATTAGGTGAAAAAGCTTTTAATTTTGGTGA GGATTTAATTCCTCAATTAAAAGTAGACTCAAAATTTAAAGATATTAATATTAAAATAATAGACATTAACTATTTTGAAC CATTAGATGAAAGACAACGTGAATTAGTTGTGGAAATAATGATTAGTAAAGGTAAAAATGAACAACAGGCTCAATTATTT AAAAAAATTAAAATTAATTTAGACTAA
Upstream 100 bases:
>100_bases AAGAAGATAATTTGCATGTTAATAAAAATATTAATGTTTATATTGATAAAATAGATACAATTACTCAAAAAATTTCATTA AAGTTAAAATTATAGAAATT
Downstream 100 bases:
>100_bases AGGGTAAAGAAACAGTGAATAAAAAAATTAAAACAGTTTTCATTAGTAGTTTAATTGTTGGACTATTAGGTTTGATAACA ACAAGTGGTGTTGCGTGCAG
Product: putative ABC substrate-binding protein - iron
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKIKLKKIIMSFLGLPILAIPLIVSACSQFKINQDVILTYRPTVSLAKEFANDNNTIDDVLKKVKINKDGSNNLLVYDLS RNPKNVQYKIVDIKKDSEQILKVTINAKIQKYKESINYDFYFQPFLTPKQKEDKTILQQNLNIIKSAWDYDQKQKIGFFN LRIKPEYQKRSLVEIKTLGEKAFNFGEDLIPQLKVDSKFKDINIKIIDINYFEPLDERQRELVVEIMISKGKNEQQAQLF KKIKINLD
Sequences:
>Translated_248_residues MKIKLKKIIMSFLGLPILAIPLIVSACSQFKINQDVILTYRPTVSLAKEFANDNNTIDDVLKKVKINKDGSNNLLVYDLS RNPKNVQYKIVDIKKDSEQILKVTINAKIQKYKESINYDFYFQPFLTPKQKEDKTILQQNLNIIKSAWDYDQKQKIGFFN LRIKPEYQKRSLVEIKTLGEKAFNFGEDLIPQLKVDSKFKDINIKIIDINYFEPLDERQRELVVEIMISKGKNEQQAQLF KKIKINLD >Mature_248_residues MKIKLKKIIMSFLGLPILAIPLIVSACSQFKINQDVILTYRPTVSLAKEFANDNNTIDDVLKKVKINKDGSNNLLVYDLS RNPKNVQYKIVDIKKDSEQILKVTINAKIQKYKESINYDFYFQPFLTPKQKEDKTILQQNLNIIKSAWDYDQKQKIGFFN LRIKPEYQKRSLVEIKTLGEKAFNFGEDLIPQLKVDSKFKDINIKIIDINYFEPLDERQRELVVEIMISKGKNEQQAQLF KKIKINLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29022; Mature: 29022
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLKKIIMSFLGLPILAIPLIVSACSQFKINQDVILTYRPTVSLAKEFANDNNTIDDV CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHH LKKVKINKDGSNNLLVYDLSRNPKNVQYKIVDIKKDSEQILKVTINAKIQKYKESINYDF HHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCE YFQPFLTPKQKEDKTILQQNLNIIKSAWDYDQKQKIGFFNLRIKPEYQKRSLVEIKTLGE EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH KAFNFGEDLIPQLKVDSKFKDINIKIIDINYFEPLDERQRELVVEIMISKGKNEQQAQLF HHHCCCHHHCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH KKIKINLD HHHEECCC >Mature Secondary Structure MKIKLKKIIMSFLGLPILAIPLIVSACSQFKINQDVILTYRPTVSLAKEFANDNNTIDDV CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHH LKKVKINKDGSNNLLVYDLSRNPKNVQYKIVDIKKDSEQILKVTINAKIQKYKESINYDF HHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCE YFQPFLTPKQKEDKTILQQNLNIIKSAWDYDQKQKIGFFNLRIKPEYQKRSLVEIKTLGE EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH KAFNFGEDLIPQLKVDSKFKDINIKIIDINYFEPLDERQRELVVEIMISKGKNEQQAQLF HHHCCCHHHCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHH KKIKINLD HHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA