Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762150

Identifier: 170762150

GI number: 170762150

Start: 28056

End: 29027

Strand: Reverse

Name: 170762150

Synonym: UPA3_0027

Alternate gene names: NA

Gene position: 29027-28056 (Counterclockwise)

Preceding gene: 170762061

Following gene: 170761852

Centisome position: 3.86

GC content: 23.15

Gene sequence:

>972_bases
GTGAATAAAAAAATTAAAACAGTTTTCATTAGTAGTTTAATTGTTGGACTATTAGGTTTGATAACAACAAGTGGTGTTGC
GTGCAGCTCATCAATAAAATCAAAACAAGAGAATGAAATTTATCCAACCATTAAAGGTTATGATCAACATGATTTTTCAA
AGATTTTAGCTTCAGAATTTATTAAGATTATTAAAACTAATATTCAATTTTTGGCACCAAATAAAGATATTAAATATGAA
TTATATGATGCACGATTGAATGAGTTAGATGAAGATGTAATTGATCTAATAATTCGTTATCATTTTAAAGGTCAAACGCA
CACTTACAAAAAAATCTTAAAAGGTTTTAAGAATGCTAAACAATATCGTTTATTTTTAGAAAATAAAAAATATTTAGAAG
ATGAAAAAAACCATAATACTCTTTATTTAATGCCCATAGTTAATTCAAGTATTAACATTAGTAAAACAACAGTAGATGAA
GCATTAAAATGACAAAATAGTTATTTAAATATTAACAATAGTAATAATGATTTAAAATATGAAATTCTAAAAATTACTAA
AAGTAAAACTGCTAATTCTATTGATATCGAAATTAAAATCAGTAAAGGTAATGGAGAAAATTTAGCAAGCATTACTTATA
ACAAAACACTTAATGGTTTTATTTCTGAAGCTGATAAAAAGATTTATTTAGCTAATTTAGAAGCGATTAAACAAGATAAA
AATCAACTTGAACCACAATTAATTGATGAAAAAACAAAACAAAAAACAATAAAAGAAGTTATTGAAAATTATAAAACATT
ATTTAAATTACCATTCCAAACAGGTTTTATTTATGAAATTCAAAGTGTTGAACCTGATGTTAATAACAAAACAGCGGTGG
TTTTTAAGATTTTGATTAAAAAAGGCAATGGAAGTCAAGAAGCAGTTTTAGAATATTTAAAAACGATTAAAGGATTTAAT
CAAAATAAATAA

Upstream 100 bases:

>100_bases
AATTAGTTGTGGAAATAATGATTAGTAAAGGTAAAAATGAACAACAGGCTCAATTATTTAAAAAAATTAAAATTAATTTA
GACTAAAGGGTAAAGAAACA

Downstream 100 bases:

>100_bases
TTTATTTAAAATAATATATTTTTGTTAAAATTTATAAGTTATTTTATTTTTTTGATTTAAATAACAAACAAATATTTAAA
ATTACGAAAGGTGGATTCCA

Product: putative ABC substrate-binding protein - iron

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNKKIKTVFISSLIVGLLGLITTSGVACSSSIKSKQENEIYPTIKGYDQHDFSKILASEFIKIIKTNIQFLAPNKDIKYE
LYDARLNELDEDVIDLIIRYHFKGQTHTYKKILKGFKNAKQYRLFLENKKYLEDEKNHNTLYLMPIVNSSINISKTTVDE
ALKWQNSYLNINNSNNDLKYEILKITKSKTANSIDIEIKISKGNGENLASITYNKTLNGFISEADKKIYLANLEAIKQDK
NQLEPQLIDEKTKQKTIKEVIENYKTLFKLPFQTGFIYEIQSVEPDVNNKTAVVFKILIKKGNGSQEAVLEYLKTIKGFN
QNK

Sequences:

>Translated_323_residues
MNKKIKTVFISSLIVGLLGLITTSGVACSSSIKSKQENEIYPTIKGYDQHDFSKILASEFIKIIKTNIQFLAPNKDIKYE
LYDARLNELDEDVIDLIIRYHFKGQTHTYKKILKGFKNAKQYRLFLENKKYLEDEKNHNTLYLMPIVNSSINISKTTVDE
ALK*QNSYLNINNSNNDLKYEILKITKSKTANSIDIEIKISKGNGENLASITYNKTLNGFISEADKKIYLANLEAIKQDK
NQLEPQLIDEKTKQKTIKEVIENYKTLFKLPFQTGFIYEIQSVEPDVNNKTAVVFKILIKKGNGSQEAVLEYLKTIKGFN
QNK
>Mature_323_residues
MNKKIKTVFISSLIVGLLGLITTSGVACSSSIKSKQENEIYPTIKGYDQHDFSKILASEFIKIIKTNIQFLAPNKDIKYE
LYDARLNELDEDVIDLIIRYHFKGQTHTYKKILKGFKNAKQYRLFLENKKYLEDEKNHNTLYLMPIVNSSINISKTTVDE
ALK*QNSYLNINNSNNDLKYEILKITKSKTANSIDIEIKISKGNGENLASITYNKTLNGFISEADKKIYLANLEAIKQDK
NQLEPQLIDEKTKQKTIKEVIENYKTLFKLPFQTGFIYEIQSVEPDVNNKTAVVFKILIKKGNGSQEAVLEYLKTIKGFN
QNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36926; Mature: 36926

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIKTVFISSLIVGLLGLITTSGVACSSSIKSKQENEIYPTIKGYDQHDFSKILASEF
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IKIIKTNIQFLAPNKDIKYELYDARLNELDEDVIDLIIRYHFKGQTHTYKKILKGFKNAK
HHHHHHCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHH
QYRLFLENKKYLEDEKNHNTLYLMPIVNSSINISKTTVDEALKQNSYLNINNSNNDLKYE
HEEEEECCCHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEE
ILKITKSKTANSIDIEIKISKGNGENLASITYNKTLNGFISEADKKIYLANLEAIKQDKN
EEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCEEEEEHHHHHHHHHH
QLEPQLIDEKTKQKTIKEVIENYKTLFKLPFQTGFIYEIQSVEPDVNNKTAVVFKILIKK
HCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEEC
GNGSQEAVLEYLKTIKGFNQNK
CCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKKIKTVFISSLIVGLLGLITTSGVACSSSIKSKQENEIYPTIKGYDQHDFSKILASEF
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IKIIKTNIQFLAPNKDIKYELYDARLNELDEDVIDLIIRYHFKGQTHTYKKILKGFKNAK
HHHHHHCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHH
QYRLFLENKKYLEDEKNHNTLYLMPIVNSSINISKTTVDEALKQNSYLNINNSNNDLKYE
HEEEEECCCHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEE
ILKITKSKTANSIDIEIKISKGNGENLASITYNKTLNGFISEADKKIYLANLEAIKQDKN
EEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCEEEEEHHHHHHHHHH
QLEPQLIDEKTKQKTIKEVIENYKTLFKLPFQTGFIYEIQSVEPDVNNKTAVVFKILIKK
HCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEEC
GNGSQEAVLEYLKTIKGFNQNK
CCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA