Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170761981

Identifier: 170761981

GI number: 170761981

Start: 37747

End: 38487

Strand: Reverse

Name: 170761981

Synonym: UPA3_0035

Alternate gene names: NA

Gene position: 38487-37747 (Counterclockwise)

Preceding gene: 170762438

Following gene: 170761854

Centisome position: 5.12

GC content: 23.08

Gene sequence:

>741_bases
ATGTTGAGTAACAAAAAATTTTTAGATTTAGATATTATAAAGGAATCTTTTGATAATTATTTGAGTGTTGGAACGTCTAG
AAGTACTAAAAAATTAAAAACATTACATGGGAGTATAGCAAAAGATTTAGAAGAATTGTTAGGCAAAGAATACAATATTA
AATCCCAAGGTTATAGAGATGATAAAGAAGAATGTATTGATGGTAGATATTACAACAAAAAAGTTGATATAACAATTAAA
AATAATGGAAAATCAATTGCTGGACTAGCAATTAAATTTGTTATGAGTAATTATTCTCAAAATAGTAATAATTATTTTGA
GAATATGTTAGGCGAAACAGCTAATTTACGATCTAATTCAGTTCCTTATTTTCAAATTTTTATAATTTTTGATAAAGTTC
CATACTATAAAAGTGATGGTGTATTACAAAAATATGATAATATTTCAAACCACAATTTGGAAAAATATTTAAAATTATCA
GATGATGACCCTAAAGTTTATTTTCATACACCAGATAAAACGCTCTTCATTTTACTTAGTTTGAAAGAAATTAGTGAGGA
AATTAAAAATAAAAAAGATTACATAAGATGTTATAAAGAAATTATGAATGATGAAGACTTACTAAGTTATTCAAACAAAA
TCGATGATTTATTTGGTAATTCTATAATATTAAATAATTATGAAGATTTTATCAAAAGAATGTGCGCTCTTATTATAGGC
TATCAAAAAATAAAAACATAA

Upstream 100 bases:

>100_bases
TTATTAGGAAAATATAAAAATGGTGGTTATTATACTTTTTCATCGAAAGATGTAAAAAAATACTTGGATTACAAATTAAA
AAATGAGGAAATTTAATAAA

Downstream 100 bases:

>100_bases
TCAATATAAATTCATACTTTTTTAAAACCTTAATGCAAAATTATATAAGTATTATAAAATAACATATTATTTTAAATTTT
AATGGAGGTTAAAGTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK
NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS
DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG
YQKIKT

Sequences:

>Translated_246_residues
MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK
NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS
DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG
YQKIKT
>Mature_246_residues
MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK
NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS
DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG
YQKIKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y035_UREPA (Q9PRB0)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_077865.1
- GeneID:   876395
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU035
- HOGENOM:   HBG568733
- OMA:   KEIMNDE
- ProtClustDB:   CLSK395236
- BioCyc:   UURE95667:UU035-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28727; Mature: 28727

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRD
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNS
CHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
VPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKTLFILLS
CCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCCEEEEEEE
LKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG
HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
YQKIKT
HHHHCC
>Mature Secondary Structure
MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRD
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNS
CHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
VPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKTLFILLS
CCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCCEEEEEEE
LKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG
HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
YQKIKT
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724