Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170761854
Identifier: 170761854
GI number: 170761854
Start: 36576
End: 37643
Strand: Reverse
Name: 170761854
Synonym: UPA3_0034
Alternate gene names: NA
Gene position: 37643-36576 (Counterclockwise)
Preceding gene: 170761981
Following gene: 170762084
Centisome position: 5.01
GC content: 25.0
Gene sequence:
>1068_bases ATGCTTATATCAAAACATGAAGAAAGAGTAAAGAGTATATTATCTGCTCGTATGGAAAATGGAAATTTGCGTAGTAGGGA AAATACTCAAGTTGAATTTAAACAATCATTTAATAAAGGCAACATTGCAATATATGCTAAAACTATGGCAGCATTTTCTA ATAACAGTGGTGGATATATTATTTTTGGTATTAAAGATTCACCTCGTTCCATAATTGGGTTACAAAATAGTAATTTTGAA AATATTCAACAAGAAGATTTGACAGATTCTATTAATAATCTATTTTCCCCTTCTATAAATTGAGAATTAGGCTCATTTAT TTTAAAAGAAAAAGAAATTAATTCTAATGGGGATGTTATCATTGTTCAAAAAATTATTGGGTGAATTTATACCGAAGAAT CAAATATAAAACCAGTGATAGCACAAAAGAATAATAGTTCAGAAAAAATTGTTAATGGTGATATATTTTATCGTTATAGA GCGAGAACTGAAAAAATAAAATATGCAGAAATGGAACAAATTATTAATTGTAGAATGAAGCAAGAACGAGATAGCTTATT TAAGGTTTTTGAATTTATTAGAAATAATGGTGCTACTAATTTAGGAATAGTTGATTATAATAACGGAAAATTGTCCACTC CTTATGGAGTTGATGTTGTTTTAGAAAAAAATCTTATAGCAAAATTACTAAAAAAAGCAAAATTTATAAAAGAAGGTAGT TTTAGTGAAAATGAAGGAATACCAGTAATCAAAGTTACTGGAAATATAAATTTGGCAGAAGAAGTTCCAGTTCCATTAGA AAATTTAGATGAAACTTATCCCTATATTCAAAAACAATTAGCCGAAAAACTTAATATAACACCTCAAAAATTATATGCAC TTATTTGATATTTTAAAATGAAGGAATCGAAAAAATATCATTTAGAAATTACAACATCAAAAACCAATAAAACACATAAG TTTTCCAAGTTTGCACTTTTATTTTTAAAAGAAAAAATAATCGAATTAGATGAAAATAAAAATGAACTAAACAATATAAT ATCAAAATTTAATAATAGAAAAAAGTAA
Upstream 100 bases:
>100_bases ATATAAATTCATACTTTTTTAAAACCTTAATGCAAAATTATATAAGTATTATAAAATAACATATTATTTTAAATTTTAAT GGAGGTTAAAGTAAATTAAG
Downstream 100 bases:
>100_bases AACTATTAACTTTTTAAATATAATATTTATAAGGAAAGATGTGCATGAAATGAAAGAAATAACACCATTAATTGTTGCTA ATTGATTTTTAACAAAAGAA
Product: AAA domain-contain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYIIFGIKDSPRSIIGLQNSNFE NIQQEDLTDSINNLFSPSINWELGSFILKEKEINSNGDVIIVQKIIGWIYTEESNIKPVIAQKNNSSEKIVNGDIFYRYR ARTEKIKYAEMEQIINCRMKQERDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGS FSENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALIWYFKMKESKKYHLEITTSKTNKTHK FSKFALLFLKEKIIELDENKNELNNIISKFNNRKK
Sequences:
>Translated_355_residues MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYIIFGIKDSPRSIIGLQNSNFE NIQQEDLTDSINNLFSPSIN*ELGSFILKEKEINSNGDVIIVQKIIG*IYTEESNIKPVIAQKNNSSEKIVNGDIFYRYR ARTEKIKYAEMEQIINCRMKQERDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGS FSENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALI*YFKMKESKKYHLEITTSKTNKTHK FSKFALLFLKEKIIELDENKNELNNIISKFNNRKK >Mature_355_residues MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYIIFGIKDSPRSIIGLQNSNFE NIQQEDLTDSINNLFSPSIN*ELGSFILKEKEINSNGDVIIVQKIIG*IYTEESNIKPVIAQKNNSSEKIVNGDIFYRYR ARTEKIKYAEMEQIINCRMKQERDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGS FSENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALI*YFKMKESKKYHLEITTSKTNKTHK FSKFALLFLKEKIIELDENKNELNNIISKFNNRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007421 [H]
Pfam domain/function: PF04326 AAA_4 [H]
EC number: NA
Molecular weight: Translated: 40336; Mature: 40336
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEHHHCCCCCCEE IFGIKDSPRSIIGLQNSNFENIQQEDLTDSINNLFSPSINELGSFILKEKEINSNGDVII EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEE VQKIIGIYTEESNIKPVIAQKNNSSEKIVNGDIFYRYRARTEKIKYAEMEQIINCRMKQE EEEHHHHEECCCCCCEEEEECCCCCCEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHH RDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGSFS HHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCC ENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALIYFKMKES CCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHEEEECCC KKYHLEITTSKTNKTHKFSKFALLFLKEKIIELDENKNELNNIISKFNNRKK CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEHHHCCCCCCEE IFGIKDSPRSIIGLQNSNFENIQQEDLTDSINNLFSPSINELGSFILKEKEINSNGDVII EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEE VQKIIGIYTEESNIKPVIAQKNNSSEKIVNGDIFYRYRARTEKIKYAEMEQIINCRMKQE EEEHHHHEECCCCCCEEEEECCCCCCEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHH RDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGSFS HHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCC ENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALIYFKMKES CCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHEEEECCC KKYHLEITTSKTNKTHKFSKFALLFLKEKIIELDENKNELNNIISKFNNRKK CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]