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The map label for this gene is ynbC [H]

Identifier: 170683337

GI number: 170683337

Start: 1770033

End: 1771790

Strand: Reverse

Name: ynbC [H]

Synonym: EcSMS35_1762

Alternate gene names: 170683337

Gene position: 1771790-1770033 (Counterclockwise)

Preceding gene: 170681478

Following gene: 170680460

Centisome position: 34.96

GC content: 50.46

Gene sequence:

>1758_bases
ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCAC
TTTACAGCCAGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGTCATGAACATTCTGGTCGTCTACAACATATCGTTG
ATGAACTGGCGATGCCAGATACTGCTTTTTATGCATGGGATGCCCGAGGGCATGGACAAACTTCGGGGCCGCGTGGTTAT
AGTCCGTCTCTTGCGCGTTCAGTGCAGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTCGGACTGGA
AGAGGTGGTTGTGATCGCGCAAAGCGTCGGCGCAGTGATGGTTGCTACATGGGTTCATGATTATGCGCCTGCTATTCGCG
GGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGT
CTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGTGGCGAGTTTCAA
TAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTTTATAAAACGTCTGAACGTATTGTTAGCG
ATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGTCAACCGCAGATTGAT
TTTTATCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAA
CAGGGCGCAGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGC
ATGAAGACCGCACTGGACCATCAGCGGATCGCTGGCGGCTCCTTTCAGGTGGACCCGTGCCATTATCGCCGGTTGATTTG
GCGTATCGCTTTATGCGTAAAGCGATGAAATTGTTCGAGACGCACTCTGCGGGCCTGCATCTCGGAATGAGCACCGGCTT
TGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAA
TCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATGCTGATTAAACAAGCCGTTGCC
GATCTCCACGCCAAAGGTTTAGCCATCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGA
GTATGAACCTGCCGTATGCGATATTTTGTTACATGATTACAGTGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCCC
AACGGGGAATGTCTGGGCGGGTGCGTTATGAACAGGGCGATGCGTTTAATCCGGCAGAACTCAGCACGTTAACTCCGCGG
CCTACGCTGGCGATTGTCTCTGGCCTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGC
CAATGCCATCGATCCGGGTGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCACAACTGGAGCTGATTGCCGGGGTGT
TAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCTCAAGGGGAGATGGATTCGCTCGTGCATGATGCC
GGATTTGATAAATGCACACAACGGATTGATGAGTGGGGCATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA

Upstream 100 bases:

>100_bases
ACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATTCGCTACTGCTGTT
ACTGAAGGAAAATAGAGAAA

Downstream 100 bases:

>100_bases
ACGCCGGAACGTATTGCTACAAGGAGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACATATGGATTTCTTA
ATCAGTTCACCGCGACTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFETHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQMLIKQAVA
DLHAKGLAIRVVDIAAGHGRYVLDALEYEPAVCDILLHDYSELNVAQGQEMIAQRGMSGRVRYEQGDAFNPAELSTLTPR
PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVHDA
GFDKCTQRIDEWGIFTVSMAVRRDN

Sequences:

>Translated_585_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFETHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQMLIKQAVA
DLHAKGLAIRVVDIAAGHGRYVLDALEYEPAVCDILLHDYSELNVAQGQEMIAQRGMSGRVRYEQGDAFNPAELSTLTPR
PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVHDA
GFDKCTQRIDEWGIFTVSMAVRRDN
>Mature_585_residues
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVMVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFETHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQMLIKQAVA
DLHAKGLAIRVVDIAAGHGRYVLDALEYEPAVCDILLHDYSELNVAQGQEMIAQRGMSGRVRYEQGDAFNPAELSTLTPR
PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVHDA
GFDKCTQRIDEWGIFTVSMAVRRDN

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=585, Percent_Identity=95.5555555555556, Blast_Score=1157, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 65633; Mature: 65633

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPD
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCC
TAFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVM
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR
HHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCCCHH
FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP
HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFETHSAGLHLGMSTGFDSGSSLDYVYQNQ
CHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCC
PQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQMLIKQAVADLHAKGLAIRVVDIAAGHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC
YVLDALEYEPAVCDILLHDYSELNVAQGQEMIAQRGMSGRVRYEQGDAFNPAELSTLTPR
EEHHHHHCCCHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
KPWVMRVRSQGEMDSLVHDAGFDKCTQRIDEWGIFTVSMAVRRDN
CCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCC
>Mature Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPTLQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPD
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCC
TAFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVM
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR
HHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCCCHH
FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP
HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFETHSAGLHLGMSTGFDSGSSLDYVYQNQ
CHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCC
PQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQMLIKQAVADLHAKGLAIRVVDIAAGHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCC
YVLDALEYEPAVCDILLHDYSELNVAQGQEMIAQRGMSGRVRYEQGDAFNPAELSTLTPR
EEHHHHHCCCHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
KPWVMRVRSQGEMDSLVHDAGFDKCTQRIDEWGIFTVSMAVRRDN
CCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]