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The map label for this gene is ydcJ [H]

Identifier: 170683072

GI number: 170683072

Start: 1754295

End: 1755638

Strand: Reverse

Name: ydcJ [H]

Synonym: EcSMS35_1751

Alternate gene names: 170683072

Gene position: 1755638-1754295 (Counterclockwise)

Preceding gene: 170682410

Following gene: 170679744

Centisome position: 34.64

GC content: 52.6

Gene sequence:

>1344_bases
ATGGCGAACAGCATCACGGCGGATGAGATTCGGGAACAGTTTTCGCAGGCAATGTCAGCCATGTACCAGCAAGAAGTTCC
GCAGTACGGCACGCTGCTGGAACTGGTAGCTGATGTGAATCTGGCTGTGCTGGAAAACAATCCTCAACTGCACGAAAAAA
TGGTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGTGTTGGGACTGCACAAGAGCTTGCT
ACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCGGGAGTGCCGGTACA
TTCCACAGCATTTCGGCCCATTGATGATGCTTCTCTGGCGCGTAATCCCTTCCGCGTTTTTACCTCATTACTCCGCCTTG
AGCTTATCGAGAACGAATTTTTGCGCCAGAAAGCGGCGGAGATTCTGCGTCAGCGCGATATCTTCACCCCACGTTGTCGA
CAACTGTTAGAGGAGTATGAGCAGCGGGGCGGTTTTAACGAAACACAGGCACAGGAGTTTGTGCAGGAAGCCCTGGAAAC
GTTTCGTTGGCACCAGTCAGCAACGGTAGATGAAGAAACCTATCGCGCCTTGCACAACGAACATCGGTTGATTGCTGATG
TGGTCTGTTTTCCTGGATGCCATATCAACCACCTGACGCCACGTACGCTGGATATTGACCGGGTGCAGTCGATGATGCCT
GAATGCGGGATTGAACCCAAAATTCTGATCGAAGGGCCGCCGCGCCGCGAGGTATCTATTTTACTACGCCAGACCAGCTT
TAAAGCACTGGAAGAGACGGTGTTGTTTGCAGGGCAGAAACAGGGCACGCATACCGCGCGCTTTGGTGAAATAGAGCAGC
GTGGCGTGGCATTAACGCCGAAAGGACGACAACTGTATGATGATCTACTGCGGAACGCTGGAACCGGGCAGGATAATCTC
ACTCACCAAATGCATTTACAGGAAACCTTCCGCACTTTTCCTGACAGTGAGTTTTTAATGCGTCAGCAAGGGTTGGCATG
GTTCCGGTACCGTCTGACGCCTTCAGGTGAGGCGCATCGTCAGGCGATTCATCCCGGAGACGATCCACAGCCCTTAATTG
AACGTGGTTGGGTAGTGGCGCAACCCATTACCTATGAAGATTTCTTGCCTGTTAGCGCGGCGGGGATCTTCCAGTCAAAT
CTGGGTAATGAAACGCAGGCACGCAGTCACGGTAATGCCAGTCGCGAAGCATTTGAGCAGGCGTTGGGCTGCCCGGTTTT
GGATGAGTTCCAGCTTTATCAGGAAGCGGAAGAACGCAGTAAACGTCGCTGTGGTTTGCTTTAA

Upstream 100 bases:

>100_bases
ATTGATGTTTTCGCGGCGAGATCACAGTTTGTAAATTCTTCCCGCCGGAGTGAATGCGGTTACCTACACTCCAGATTACT
GACCACTGGAGGCAGACACT

Downstream 100 bases:

>100_bases
ATTCTGACCATCCGCCTTTGCAAAAATTTGCCTGATTTTACAAACGAATCAGGCTCATCCCATCGACATAAAAAAATTGC
CGATTTATGCATATTCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEFLRQKAAEILRQRDIFTPRCR
QLLEEYEQRGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
ECGIEPKILIEGPPRREVSILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNL
THQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSN
LGNETQARSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL

Sequences:

>Translated_447_residues
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELA
TLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEFLRQKAAEILRQRDIFTPRCR
QLLEEYEQRGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
ECGIEPKILIEGPPRREVSILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNL
THQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSN
LGNETQARSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL
>Mature_446_residues
ANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELAT
LRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEFLRQKAAEILRQRDIFTPRCRQ
LLEEYEQRGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPE
CGIEPKILIEGPPRREVSILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLT
HQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNL
GNETQARSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=447, Percent_Identity=99.1051454138702, Blast_Score=917, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 51065; Mature: 50934

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHH
ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHC
RNPFRVFTSLLRLELIENEFLRQKAAEILRQRDIFTPRCRQLLEEYEQRGGFNETQAQEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKILIEGPPRREVSILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP
HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHR
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHH
QAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQARSHGNASREAFEQ
HCCCCCCCCCHHHHCCCEEECCCCHHHCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
ALGCPVLDEFQLYQEAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHH
ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA
HHHCHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCHHHC
RNPFRVFTSLLRLELIENEFLRQKAAEILRQRDIFTPRCRQLLEEYEQRGGFNETQAQEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
ECGIEPKILIEGPPRREVSILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP
HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHCCEEECC
KGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHR
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCCCHHHH
QAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQARSHGNASREAFEQ
HCCCCCCCCCHHHHCCCEEECCCCHHHCCCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHH
ALGCPVLDEFQLYQEAEERSKRRCGLL
HHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]