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The map label for this gene is mdoD

Identifier: 170679744

GI number: 170679744

Start: 1752415

End: 1754034

Strand: Reverse

Name: mdoD

Synonym: EcSMS35_1750

Alternate gene names: 170679744

Gene position: 1754034-1752415 (Counterclockwise)

Preceding gene: 170683072

Following gene: 170684128

Centisome position: 34.61

GC content: 51.54

Gene sequence:

>1620_bases
ATGGCCGCCGTGTGCGGTACCAGCGGCATTGCTTCTCTTTTTTCTCAGGCGGCATTCGCGGCAGATTCTGATATTGCCGA
CGGGCAAACCCAGCGTTTTGACTTCTCCATTCTACAGTCAATGGCGCACGACTTAGCGCAAACAGCGTGGCGTGGTGCGC
CGCGTCCGTTACCTGACACTCTGGCGACAATGACGCCGCAGGCTTATAACAGTATTCAATACGACGCCGAAAAATCGCTC
TGGCATAACGTTGAGAACCGTCAACTGGACGCTCAGTTCTTCCATATGGGAATGGGATTCCGTCGCCGCGTTCGTATGTT
TTCTGTAGATCCCGCAACACATCTGGCGCGTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCGGGTGTTG
ATACCAAACAATTAGAAGGGCAAAGCGATCTCGGTTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGT
GATGTCGTATCATTCCTCGGTGCGAGTTATTTCCGCGCCGTTGACGACACATATCAATACGGTCTATCGGCTCGCGGCCT
GGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGG
CAACCACCTTTACCGTTTATGCGTTGCTCGATAGCGCCAGCATTACTGGTGCCTATAAGTTCACTATCCATTGCGAGAAA
AGTCAGGTGATTATGGATGTGGAAAATCACCTGTATGCGCGCAAAGACATTAAACAGCTGGGCATTGCGCCGATGACCAG
TATGTTCAGCTGCGGTACTAATGAACGTCGGATGTGCGACACCATTCATCCGCAAATCCATGACTCTGATCGTTTGTCCA
TGTGGCGGGGCAACGGCGAGTGGATTTGTCGTCCGCTGAACAATCCGCAAAAATTGCAGTTCAATGCTTACACCGACAAC
AACCCGAAAGGGTTTGGTTTATTGCAACTGGATCGTGATTTCTCCCATTATCAGGACATTATGGGCTGGTATAACAAACG
CCCAAGTCTGTGGGTGGAACCGCGTAACAAGTGGGGTAAGGGCACCATCGGCCTGATGGAAATCCCAACAACGGGCGAAA
CGCTGGATAACATTGTCTGCTTCTGGCAGCCAGAAAAAGCTGTAAAAGCGGGTGATGAGTTTGCATTCCAGTATCGTCTG
TACTGGAGTGCGCAACCGCCTGTTCATTGCCCATTAGCGCGCGTTATGGCGACGCGTACCGGCATGGGTGGTTTCCCGGA
AGGTTGGGCTCCAGGTGAACACTATCCCGAAAAATGGGCGCGTCGTTTTGCCGTCGATTTCGTTGGTGGTGATCTGAAAG
CTGCCGCGCCAAAAGGCATTGAGCCGGTGATTACGCTTTCCAGTGGGGAAGCGAAGCAAATCGAAATTCTCTATATTGAA
CCCATTGATGGTTATCGTATTCAGTTTGACTGGTATCCGACTTCGGACTCCACTGATCCGGTCGATATGCGGATGTATCT
GCGTTGTCAGGGCGACGCTATCAGTGAAACATGGCTGTATCAGTATTTCCCGCCAGCGCCCGATAAACGTCAGTATGTTG
ACGACCGCGTGATGAGTTAA

Upstream 100 bases:

>100_bases
TTCTTGCCGCTGAAAACGTTCAGCGCGGGACCATTCACAACACCAGAAGGACTCACTTTCAGGTATGGATCGTAGACGAT
TTATTAAAGGTTCAATGGCT

Downstream 100 bases:

>100_bases
TCGTTTTTTCTTCGGCACCTTCTTCGGGAGGTGCCGTCTGGTTAAACACGATCCCGCTCGCATTTTTCCCTAAGTTAAAT
GAGTAATCTGATGGTGTGTA

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSL
WHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARR
DVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK
SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDN
NPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRL
YWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE
PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS

Sequences:

>Translated_539_residues
MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSL
WHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARR
DVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK
SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDN
NPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRL
YWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE
PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS
>Mature_538_residues
AAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLW
HNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRD
VVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEKS
QVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNN
PKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLY
WSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEP
IDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs)

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family

Homologues:

Organism=Escherichia coli, GI145693128, Length=539, Percent_Identity=99.8144712430427, Blast_Score=1128, Evalue=0.0,
Organism=Escherichia coli, GI1787286, Length=505, Percent_Identity=37.4257425742574, Blast_Score=307, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPGD_ECO24 (A7ZLL8)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462697.1
- ProteinModelPortal:   A7ZLL8
- SMR:   A7ZLL8
- STRING:   A7ZLL8
- EnsemblBacteria:   EBESCT00000022952
- GeneID:   5587242
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1603
- eggNOG:   COG3131
- GeneTree:   EBGT00050000010842
- HOGENOM:   HBG349977
- OMA:   MYQVGEN
- ProtClustDB:   PRK13273
- BioCyc:   ECOL331111:ECE24377A_1603-MONOMER
- HAMAP:   MF_01068
- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311
- PIRSF:   PIRSF006281
- TIGRFAMs:   TIGR01409

Pfam domain/function: PF04349 MdoG; SSF74650 Gal_mut_like; SSF81296 Ig_E-set

EC number: NA

Molecular weight: Translated: 61319; Mature: 61187

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS51318 TAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIH
HHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHC
FRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQY
CCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK
CCCCCCEEEEECCCCHHHCCCEEEEEHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEECC
SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGE
CEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECCCC
WICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGK
EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCC
GTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRT
CCEEEEECCCCCCCHHCEEEEECCHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHC
GMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE
CCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEE
PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS
CCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDT
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIH
HHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEECCHHHHHHHHHC
FRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQY
CCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK
CCCCCCEEEEECCCCHHHCCCEEEEEHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEECC
SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGE
CEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECCCC
WICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGK
EEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCC
GTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRT
CCEEEEECCCCCCCHHCEEEEECCHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHC
GMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE
CCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEE
PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS
CCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA