| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170682880
Identifier: 170682880
GI number: 170682880
Start: 4126045
End: 4127340
Strand: Reverse
Name: 170682880
Synonym: EcSMS35_4036
Alternate gene names: NA
Gene position: 4127340-4126045 (Counterclockwise)
Preceding gene: 170684308
Following gene: 170683433
Centisome position: 81.43
GC content: 35.03
Gene sequence:
>1296_bases ATGGCAAGCCCTATAATCAGCGGAACAATGATGTCAAATCCCTGCCCTTCCACTTTTTTGGATAAAAATATAAATATCGC TGCTGAGCTTGATATTACAAAAAACGAGAAAAAATATTCACCTGGCAGTAATTTCGCAAAATGGATGTTACAGGAAATAA AGCGCTTAATACTAAATATCATGTCCGGTTCTCGCAGTGTTAATACCGAAATTCTTGACTATTTCCACCCTATGCCAGGC ACGGAAAATAATGGTAATCGTACCTGGATGGCGGCAACTGGAGAGAACGAATATACCGTGATTGAACAAACAGGTGACAA ATCCTTTAATGTTATACAGTTTGGCGCAGGTGAAAAAAATAAAAAAATAATACTCGAAGAAACATCATATTCTGGAGTGG CTGTAGCGACTATTATCAAATCGCTATCTGAAAAAACGGCTGTGTTAGAAACACATTCTGCTGACACGGTTTTGAGGAAA AAATTAGTTAATAGTATTGTTATGATGAATACGGATTGTAATTACGAAATGCCTGCGGAAATTTTGAGTAATACATATGA TTTATTAAACCTGCGAATTCAAAAAGATGAGGGGCATTTACCTGTTCATGAAAAAATTGATATTACTGAGGATTATTTAC ACTCTATGACTATGGATGCTCATAGATGTATAAAAGAACAAACTAAACCAAGTGGTGCTGCAAAAATAACTTGCTGTGGT GTTGAGTTAAGTAAAGATATTCTTAAAATATTTGCAGGCAAAATTGAAATAATTGAAAAAGACACAAACTATAGTCAAAA TACACCTGAACAATTGGTTGCACAGGTTTGCTTTAATGATGATGATTGTGCTCGGGTAAGAGAATTATTAAAACAATCAA ACGGTAATATTACGGATGATAAGATTGATGAAATAATCGCTTGCTTAGCCAGTCCTCAGGGGATTACATGTTTTTATTAT TCTTCCGCACAAGGCTATCAGAGTCGCTTACAACACACATCTCAAGATGTTCGCGAGTTACTCTCAAAGAGTTTTGATAG TTTCATTTCATTTACAACGGATTTAAAAAAATCAGGAAATTCTTTTTTTGGGTCTGGAAAGTATCTTAATGAAATGGATT TTACTATAAATGGGTTTAGTCAGAAGATGTATTTGATGGCGGTTAATAATGTTGGAAATGAAGTTAAGCTTCAGTGTTCT CGTTATTTTACTACCGGTAGGGTCGACGAACAAAACTCCAAAAACGATAAAGTCGCTTTTACATTTTTCGGTGCCGCAAC AACTGCTGATTTATGA
Upstream 100 bases:
>100_bases GGGCTAAAATTTCCAGCGATGGTGTTAAATTCTGATTGCTGTCTATACCAATAGTCATGACCAGCATTCTATTAATTAAT GGTTCATCGTGAGGTATATT
Downstream 100 bases:
>100_bases TTTTTGTCTGATAAATCGCGTTTATCATTAAGGTGAACGCTTATTCTTAACCGTCTGTGTGTAAACACTCTTTTTGAAAA AAATGAGCGATTTTTGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MASPIISGTMMSNPCPSTFLDKNINIAAELDITKNEKKYSPGSNFAKWMLQEIKRLILNIMSGSRSVNTEILDYFHPMPG TENNGNRTWMAATGENEYTVIEQTGDKSFNVIQFGAGEKNKKIILEETSYSGVAVATIIKSLSEKTAVLETHSADTVLRK KLVNSIVMMNTDCNYEMPAEILSNTYDLLNLRIQKDEGHLPVHEKIDITEDYLHSMTMDAHRCIKEQTKPSGAAKITCCG VELSKDILKIFAGKIEIIEKDTNYSQNTPEQLVAQVCFNDDDCARVRELLKQSNGNITDDKIDEIIACLASPQGITCFYY SSAQGYQSRLQHTSQDVRELLSKSFDSFISFTTDLKKSGNSFFGSGKYLNEMDFTINGFSQKMYLMAVNNVGNEVKLQCS RYFTTGRVDEQNSKNDKVAFTFFGAATTADL
Sequences:
>Translated_431_residues MASPIISGTMMSNPCPSTFLDKNINIAAELDITKNEKKYSPGSNFAKWMLQEIKRLILNIMSGSRSVNTEILDYFHPMPG TENNGNRTWMAATGENEYTVIEQTGDKSFNVIQFGAGEKNKKIILEETSYSGVAVATIIKSLSEKTAVLETHSADTVLRK KLVNSIVMMNTDCNYEMPAEILSNTYDLLNLRIQKDEGHLPVHEKIDITEDYLHSMTMDAHRCIKEQTKPSGAAKITCCG VELSKDILKIFAGKIEIIEKDTNYSQNTPEQLVAQVCFNDDDCARVRELLKQSNGNITDDKIDEIIACLASPQGITCFYY SSAQGYQSRLQHTSQDVRELLSKSFDSFISFTTDLKKSGNSFFGSGKYLNEMDFTINGFSQKMYLMAVNNVGNEVKLQCS RYFTTGRVDEQNSKNDKVAFTFFGAATTADL >Mature_430_residues ASPIISGTMMSNPCPSTFLDKNINIAAELDITKNEKKYSPGSNFAKWMLQEIKRLILNIMSGSRSVNTEILDYFHPMPGT ENNGNRTWMAATGENEYTVIEQTGDKSFNVIQFGAGEKNKKIILEETSYSGVAVATIIKSLSEKTAVLETHSADTVLRKK LVNSIVMMNTDCNYEMPAEILSNTYDLLNLRIQKDEGHLPVHEKIDITEDYLHSMTMDAHRCIKEQTKPSGAAKITCCGV ELSKDILKIFAGKIEIIEKDTNYSQNTPEQLVAQVCFNDDDCARVRELLKQSNGNITDDKIDEIIACLASPQGITCFYYS SAQGYQSRLQHTSQDVRELLSKSFDSFISFTTDLKKSGNSFFGSGKYLNEMDFTINGFSQKMYLMAVNNVGNEVKLQCSR YFTTGRVDEQNSKNDKVAFTFFGAATTADL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48169; Mature: 48038
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPIISGTMMSNPCPSTFLDKNINIAAELDITKNEKKYSPGSNFAKWMLQEIKRLILNI CCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH MSGSRSVNTEILDYFHPMPGTENNGNRTWMAATGENEYTVIEQTGDKSFNVIQFGAGEKN HCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCC KKIILEETSYSGVAVATIIKSLSEKTAVLETHSADTVLRKKLVNSIVMMNTDCNYEMPAE CEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEEEEECCCCCCCCHH ILSNTYDLLNLRIQKDEGHLPVHEKIDITEDYLHSMTMDAHRCIKEQTKPSGAAKITCCG HHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC VELSKDILKIFAGKIEIIEKDTNYSQNTPEQLVAQVCFNDDDCARVRELLKQSNGNITDD CHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH KIDEIIACLASPQGITCFYYSSAQGYQSRLQHTSQDVRELLSKSFDSFISFTTDLKKSGN HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFFGSGKYLNEMDFTINGFSQKMYLMAVNNVGNEVKLQCSRYFTTGRVDEQNSKNDKVAF CCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEE TFFGAATTADL EEECCCCCCCC >Mature Secondary Structure ASPIISGTMMSNPCPSTFLDKNINIAAELDITKNEKKYSPGSNFAKWMLQEIKRLILNI CCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH MSGSRSVNTEILDYFHPMPGTENNGNRTWMAATGENEYTVIEQTGDKSFNVIQFGAGEKN HCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCC KKIILEETSYSGVAVATIIKSLSEKTAVLETHSADTVLRKKLVNSIVMMNTDCNYEMPAE CEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEEEEECCCCCCCCHH ILSNTYDLLNLRIQKDEGHLPVHEKIDITEDYLHSMTMDAHRCIKEQTKPSGAAKITCCG HHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC VELSKDILKIFAGKIEIIEKDTNYSQNTPEQLVAQVCFNDDDCARVRELLKQSNGNITDD CHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH KIDEIIACLASPQGITCFYYSSAQGYQSRLQHTSQDVRELLSKSFDSFISFTTDLKKSGN HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFFGSGKYLNEMDFTINGFSQKMYLMAVNNVGNEVKLQCSRYFTTGRVDEQNSKNDKVAF CCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEE TFFGAATTADL EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA