| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170683433
Identifier: 170683433
GI number: 170683433
Start: 4124327
End: 4125829
Strand: Reverse
Name: 170683433
Synonym: EcSMS35_4035
Alternate gene names: NA
Gene position: 4125829-4124327 (Counterclockwise)
Preceding gene: 170682880
Following gene: 170684214
Centisome position: 81.4
GC content: 36.39
Gene sequence:
>1503_bases ATGCTAGCCATTGATACTTCTAACAATGTCAAAATATGCAAAGTGTCATATTGCGAGGTTACTATGGTTAGTGTGACGAG TTATACATATCCAACGGAAACAGAGAATGATAATAGTCATTTTCAGAGTCAAACTCAGAGCCAGGGCCTGAGCCAGAGTC TAAGAGATAGTATCGAGGGTAATATTGAAGCATTTGATGCGATGGAACAAAGTGGCCTGCTCGATAATTGTAGAACATTA TCTAAAAATGCCACTTTTCGTGAGGTTTTCCGAAGTTTATTATTATACATTTTAGATTCTTTACATATCTATCGGCATGA TATCAGTGGTAAATTGGTTTCTTATTTTCATGTTACGCCTGAATCAGCGAATGCGAATTATAAAACATGGATCGCTACCA CAGGGATGGATAGCTATATAAAAATTGAGCAGACCGGCAGTGATAAGTTTAAAGTCACTGATGTGTATCGTGAGTTAAAA GGCAACAGTTTGAAAAAACAGAGTAGAGACAGGGATTTTAGTGGTCGTAATGTGAAAGAGTTTATAGGGTTATTATCAGA GCACGATGTATTGGAAAAGTATCAACTCTCAAAAGTAACAGTTGCTGCAAATGCTCTTAAGCTAGAAGTTGTTAATAATA ATTCTGAAAATAAACGCAGTTTTGGAGTTACTGATGCTGAGCGCCAATTAAAAAAAGCGTTAAATGAACAAACTCAATTA ACTCCAGATAAATTAATTCCAGATGATTGTAGTTATAAATCAGACATAAAAAAACTAGATGTTCTGGAGGGAGAGTTTAG TTCACTTCTTGCTGATGCAGCAAGACACGTTGGAGAGGGCAGCTCAATTATTTCATGTTGTGGAGTTAAAATAAATAGCA CAATCCATGAATTTCTGAGGAATAAAACCATGGCTTTGTCTGGCCATGGAGGTGTTAGAAAATATAAAGCTTTCGAAAAG CTTTTTAGTGAAATTGTATTTACGCCAGATGAATGTAATATTGTGAGAAACTCTCTACAGAAAGATGGTGTTGAGAAAAA AATCAGAGAAAATATTATTTCTTGCCTCTCCAGTATTTCAGGAATAGGTAACCTGTATTATGCTTGTTCACAGGCATTTC CTGTCGCGCTTGATAGGGGGGATATTAATGTAATACAGGCAAACGATTCTGTTTCTGCCGGGCTTGATGATAACCCAGGG TTTTGTGCTTTGCTGGGAAAAACAAATTTGCTTGTTGCTGACTTTTCACAGCATACATTCACACAAACCCATTATATTGT AAAAGCCGAAATAAATGAAGCTGGTAACGATTTTAATATTGCTAATTTCATTTATCGAACATACGGTGAGGATTATATTC ATAACGACTCAGTGGATGACTCTCTTAATGAGCGTTCCGCTGAAGATTATAGGTTTCTGGATGACTCTTTGTTACCTGAA AACGATTTCCGCAACAGGAGGAGAAATTTTTCAGGCAATATTGCAATCGCAACCTACAAATAA
Upstream 100 bases:
>100_bases AGTGATGCAATTGCATTGGGGAAATCGATAAAAATTAACGGCACTATAGTCTTATTATTGAAATAAATGAAAAATAGCGG TTAGCAATGAAATATTTATC
Downstream 100 bases:
>100_bases TTCGCTTTTTCGCAATAACACGTACCAAACGCTTACCTTTCAGGTAAGCGTTTTGACGATAAGACCAACATCATTAAGCC AATACATACCCCATATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MLAIDTSNNVKICKVSYCEVTMVSVTSYTYPTETENDNSHFQSQTQSQGLSQSLRDSIEGNIEAFDAMEQSGLLDNCRTL SKNATFREVFRSLLLYILDSLHIYRHDISGKLVSYFHVTPESANANYKTWIATTGMDSYIKIEQTGSDKFKVTDVYRELK GNSLKKQSRDRDFSGRNVKEFIGLLSEHDVLEKYQLSKVTVAANALKLEVVNNNSENKRSFGVTDAERQLKKALNEQTQL TPDKLIPDDCSYKSDIKKLDVLEGEFSSLLADAARHVGEGSSIISCCGVKINSTIHEFLRNKTMALSGHGGVRKYKAFEK LFSEIVFTPDECNIVRNSLQKDGVEKKIRENIISCLSSISGIGNLYYACSQAFPVALDRGDINVIQANDSVSAGLDDNPG FCALLGKTNLLVADFSQHTFTQTHYIVKAEINEAGNDFNIANFIYRTYGEDYIHNDSVDDSLNERSAEDYRFLDDSLLPE NDFRNRRRNFSGNIAIATYK
Sequences:
>Translated_500_residues MLAIDTSNNVKICKVSYCEVTMVSVTSYTYPTETENDNSHFQSQTQSQGLSQSLRDSIEGNIEAFDAMEQSGLLDNCRTL SKNATFREVFRSLLLYILDSLHIYRHDISGKLVSYFHVTPESANANYKTWIATTGMDSYIKIEQTGSDKFKVTDVYRELK GNSLKKQSRDRDFSGRNVKEFIGLLSEHDVLEKYQLSKVTVAANALKLEVVNNNSENKRSFGVTDAERQLKKALNEQTQL TPDKLIPDDCSYKSDIKKLDVLEGEFSSLLADAARHVGEGSSIISCCGVKINSTIHEFLRNKTMALSGHGGVRKYKAFEK LFSEIVFTPDECNIVRNSLQKDGVEKKIRENIISCLSSISGIGNLYYACSQAFPVALDRGDINVIQANDSVSAGLDDNPG FCALLGKTNLLVADFSQHTFTQTHYIVKAEINEAGNDFNIANFIYRTYGEDYIHNDSVDDSLNERSAEDYRFLDDSLLPE NDFRNRRRNFSGNIAIATYK >Mature_500_residues MLAIDTSNNVKICKVSYCEVTMVSVTSYTYPTETENDNSHFQSQTQSQGLSQSLRDSIEGNIEAFDAMEQSGLLDNCRTL SKNATFREVFRSLLLYILDSLHIYRHDISGKLVSYFHVTPESANANYKTWIATTGMDSYIKIEQTGSDKFKVTDVYRELK GNSLKKQSRDRDFSGRNVKEFIGLLSEHDVLEKYQLSKVTVAANALKLEVVNNNSENKRSFGVTDAERQLKKALNEQTQL TPDKLIPDDCSYKSDIKKLDVLEGEFSSLLADAARHVGEGSSIISCCGVKINSTIHEFLRNKTMALSGHGGVRKYKAFEK LFSEIVFTPDECNIVRNSLQKDGVEKKIRENIISCLSSISGIGNLYYACSQAFPVALDRGDINVIQANDSVSAGLDDNPG FCALLGKTNLLVADFSQHTFTQTHYIVKAEINEAGNDFNIANFIYRTYGEDYIHNDSVDDSLNERSAEDYRFLDDSLLPE NDFRNRRRNFSGNIAIATYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56139; Mature: 56139
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIDTSNNVKICKVSYCEVTMVSVTSYTYPTETENDNSHFQSQTQSQGLSQSLRDSIEG CEEEECCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NIEAFDAMEQSGLLDNCRTLSKNATFREVFRSLLLYILDSLHIYRHDISGKLVSYFHVTP CHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC ESANANYKTWIATTGMDSYIKIEQTGSDKFKVTDVYRELKGNSLKKQSRDRDFSGRNVKE CCCCCCEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHHCCCCHHHHHCCCCCCCCCHHH FIGLLSEHDVLEKYQLSKVTVAANALKLEVVNNNSENKRSFGVTDAERQLKKALNEQTQL HHHHHHHHHHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC TPDKLIPDDCSYKSDIKKLDVLEGEFSSLLADAARHVGEGSSIISCCGVKINSTIHEFLR CCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHCCCEEHHHHHHHHC NKTMALSGHGGVRKYKAFEKLFSEIVFTPDECNIVRNSLQKDGVEKKIRENIISCLSSIS CCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GIGNLYYACSQAFPVALDRGDINVIQANDSVSAGLDDNPGFCALLGKTNLLVADFSQHTF HHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCE TQTHYIVKAEINEAGNDFNIANFIYRTYGEDYIHNDSVDDSLNERSAEDYRFLDDSLLPE EEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCC NDFRNRRRNFSGNIAIATYK HHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MLAIDTSNNVKICKVSYCEVTMVSVTSYTYPTETENDNSHFQSQTQSQGLSQSLRDSIEG CEEEECCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NIEAFDAMEQSGLLDNCRTLSKNATFREVFRSLLLYILDSLHIYRHDISGKLVSYFHVTP CHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC ESANANYKTWIATTGMDSYIKIEQTGSDKFKVTDVYRELKGNSLKKQSRDRDFSGRNVKE CCCCCCEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHHCCCCHHHHHCCCCCCCCCHHH FIGLLSEHDVLEKYQLSKVTVAANALKLEVVNNNSENKRSFGVTDAERQLKKALNEQTQL HHHHHHHHHHHHHHHHHHEEEEECEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC TPDKLIPDDCSYKSDIKKLDVLEGEFSSLLADAARHVGEGSSIISCCGVKINSTIHEFLR CCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHCCCEEHHHHHHHHC NKTMALSGHGGVRKYKAFEKLFSEIVFTPDECNIVRNSLQKDGVEKKIRENIISCLSSIS CCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GIGNLYYACSQAFPVALDRGDINVIQANDSVSAGLDDNPGFCALLGKTNLLVADFSQHTF HHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCE TQTHYIVKAEINEAGNDFNIANFIYRTYGEDYIHNDSVDDSLNERSAEDYRFLDDSLLPE EEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCC NDFRNRRRNFSGNIAIATYK HHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA