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The map label for this gene is eefR [C]

Identifier: 170681981

GI number: 170681981

Start: 1860882

End: 1861448

Strand: Reverse

Name: eefR [C]

Synonym: EcSMS35_1837

Alternate gene names: 170681981

Gene position: 1861448-1860882 (Counterclockwise)

Preceding gene: 170683953

Following gene: 170683115

Centisome position: 36.73

GC content: 47.97

Gene sequence:

>567_bases
ATGACCAGCAAGCTGGAGATACGCCACAAACAGCGTCAGGATGAAATCATTAACGCCGCCCGTCGGTGTTTTCGTCGCTG
CGGATTTCATGCCGCCAGTATGTCGCAAATTGCCAGCGAAGCTCAGCTTAGCGTGGGTCAGATATATCGTTACTTCGCCA
ACAAAGACGCCATTATTGAAGAGATGGTTCGCCGTATCATCGACTTTCGTATTGCCCAAATGGACATTGACGCGCGTACC
GATCACTTTCCGGAAGTTCTTGCCTTGCGTAAATCCTTAAATGAGGACGACGACGCGCTGATGCTGGAAGTGGCTGCAGA
AGCCACACGCAACCCGCGGGTGATGGCAATGCTTGAAGAAGCTGACGCCAGAATGTTCGCTAACGGTTGTGCTCATATGA
AAAGAATGCATCCCCATCTTAGCGACGAGCACATTCGTTGCTGCGTTGAAGTGTTTGCTACCATGATGGAAGGTACGGTT
TATCGTCGTTTAACACCGCAAAAAAGCGATCCACAACATCTGCAGGAAATATATCAGGATATTGTTAGTATGTTGATAAA
TAAATAA

Upstream 100 bases:

>100_bases
CATGAATAAGATAAAAATACTTTCCATTACTTTGGAGAAACGTATAATTAGCAAAAATGAGAATGATCATTCTCACCAAG
TGATAGGCCAGGAGACAGAA

Downstream 100 bases:

>100_bases
GAACAGAATTAACCAATAGCGGGGGATATTAATCCCCCTTATTTCATTGCGAAATTCATTTCGCGATGCGGGTTCGTTAT
AACTGAATATCCCTGACATA

Product: transcriptional regulator EefR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator EefR; HTH-Type Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; HTH-Type Transcriptional Regulator BetI; Regulatory Protein Tetr

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQMDIDART
DHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTV
YRRLTPQKSDPQHLQEIYQDIVSMLINK

Sequences:

>Translated_188_residues
MTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQMDIDART
DHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTV
YRRLTPQKSDPQHLQEIYQDIVSMLINK
>Mature_187_residues
TSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIEEMVRRIIDFRIAQMDIDARTD
HFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEEADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVY
RRLTPQKSDPQHLQEIYQDIVSMLINK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21828; Mature: 21696

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
ADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQD
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IVSMLINK
HHHHHHCC
>Mature Secondary Structure 
TSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
ADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQD
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IVSMLINK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA