Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
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Accession | NC_010498 |
Length | 5,068,389 |
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The map label for this gene is ycgJ [H]
Identifier: 170681452
GI number: 170681452
Start: 1994746
End: 1995114
Strand: Reverse
Name: ycgJ [H]
Synonym: EcSMS35_1972
Alternate gene names: 170681452
Gene position: 1995114-1994746 (Counterclockwise)
Preceding gene: 170681171
Following gene: 170681057
Centisome position: 39.36
GC content: 41.46
Gene sequence:
>369_bases ATGAATATGATGCGTATTTTTTATATCGGATTGTCAGGTGTGGGGATGATGTTCTCATCAATGGCGTCTGGAAATGACGC TGGCGGACTTCAATCTCCGGCGTGCGGCGTTGTTTGCGACCCGTATATTTGTGTTAACTCAGATGGCATTTCCCCAGAGT TAACAAGGAAATATCTCGGCGAAAAAGCCGCTGAAAACTTACAATCAGTACAAGGTTACGATCCCAGCGAATTTACATTC TCTAACGGTGTATTTTGCGATGTTAAAGAAAAATTATGTCGTGATGATCGTTATTTTGGTGTAGATGGTAAGCGGAGTGG AAAAATCAATCAAACCACCACAAAGATGTTATTTATGTGTCGTGAGTGA
Upstream 100 bases:
>100_bases TCTGTCAGGTCATCGTAACTCGTCCAGGTCAGCGGTTTTGATTACGGATTGATGATGAAATGAGCATAAGTGTTGTACGG TTGGATTATCAGGATGTGCT
Downstream 100 bases:
>100_bases TGTCTTGTTTACATGATGTTCTATTCGTCATTAACCTCTTGAGCGACAGAGAGGAGTGGGGCGTTAACGTTTATGACGGG GAGAGTCCCCGTCGGTTGAC
Product: putative fels-1 prophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSVQGYDPSEFTF SNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE
Sequences:
>Translated_122_residues MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSVQGYDPSEFTF SNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE >Mature_122_residues MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSVQGYDPSEFTF SNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787425, Length=122, Percent_Identity=98.3606557377049, Blast_Score=251, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008617 [H]
Pfam domain/function: PF05666 Fels1 [H]
EC number: NA
Molecular weight: Translated: 13417; Mature: 13417
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLG CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHH EKAAENLQSVQGYDPSEFTFSNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMC HHHHHHHHHHCCCCCCCEEECCCEEEECHHHHCCCCCEECCCCCCCCCCCHHHHHEEEEE RE CC >Mature Secondary Structure MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLG CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHH EKAAENLQSVQGYDPSEFTFSNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMC HHHHHHHHHHCCCCCCCEEECCCEEEECHHHHCCCCCEECCCCCCCCCCCHHHHHEEEEE RE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]